RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
RTN4-203ENST00000357376 KRTAP21-3Q3LHN1 58 aa3.45□□□□□ -1.86
RTN4-203ENST00000357376 KRTAP10-4P60372 401 aaPredicted RBP3.43□□□□□ -1.86
RTN4-203ENST00000357376 KRTAP10-6P60371 365 aaPredicted RBP3.43□□□□□ -1.86
RTN4-203ENST00000357376 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
RTN4-203ENST00000357376 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
RTN4-203ENST00000357376 ALMS1Q8TCU4 4167 aa3.42□□□□□ -1.86
RTN4-203ENST00000357376 DYNC1H1Q14204 4646 aaKnown RBP3.42□□□□□ -1.86
RTN4-203ENST00000357376 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
RTN4-203ENST00000357376 HYDINQ4G0P3 5121 aa3.4□□□□□ -1.87
RTN4-203ENST00000357376 KRTAP3-3Q9BYR6 98 aa3.39□□□□□ -1.87
RTN4-203ENST00000357376 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
RTN4-203ENST00000357376 MYCBP2O75592 4640 aa3.37□□□□□ -1.87
RTN4-203ENST00000357376 PKHD1P08F94 4074 aa3.37□□□□□ -1.87
RTN4-203ENST00000357376 KRTAP3-2Q9BYR7 98 aa3.37□□□□□ -1.87
RTN4-203ENST00000357376 SACSQ9NZJ4 4579 aa3.36□□□□□ -1.87
RTN4-203ENST00000357376 KRTAP12-1P59990 96 aa3.35□□□□□ -1.87
RTN4-203ENST00000357376 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
RTN4-203ENST00000357376 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
RTN4-203ENST00000357376 FAT2Q9NYQ8 4349 aa3.31□□□□□ -1.88
RTN4-203ENST00000357376 M0R2T5 61 aa3.31□□□□□ -1.88
RTN4-203ENST00000357376 MT1HL1P0DM35 61 aa3.3□□□□□ -1.88
RTN4-203ENST00000357376 APOBP04114 4563 aaKnown RBP3.28□□□□□ -1.88
RTN4-203ENST00000357376 PKD1P98161 4303 aa3.28□□□□□ -1.88
RTN4-203ENST00000357376 LCE2DQ5TA82 110 aaPredicted RBP3.27□□□□□ -1.89
RTN4-203ENST00000357376 PLAC4Q8WY50 150 aa3.25□□□□□ -1.89
RTN4-203ENST00000357376 FAT3Q8TDW7 4589 aa3.25□□□□□ -1.89
RTN4-203ENST00000357376 KIAA1109Q2LD37 5005 aa3.23□□□□□ -1.89
RTN4-203ENST00000357376 A0A0A0MQY5 61 aa3.21□□□□□ -1.89
RTN4-203ENST00000357376 RYR1P21817 5038 aa3.21□□□□□ -1.9
RTN4-203ENST00000357376 KRTAP4-5Q9BYR2 181 aa3.21□□□□□ -1.9
RTN4-203ENST00000357376 TNP1P09430 55 aa3.19□□□□□ -1.9
RTN4-203ENST00000357376 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
RTN4-203ENST00000357376 RYR3Q15413 4870 aa3.18□□□□□ -1.9
RTN4-203ENST00000357376 KMT2CQ8NEZ4 4911 aaKnown RBP3.17□□□□□ -1.9
RTN4-203ENST00000357376 LORP23490 312 aaPredicted RBP3.17□□□□□ -1.9
RTN4-203ENST00000357376 RYR2Q92736 4967 aa3.16□□□□□ -1.9
RTN4-203ENST00000357376 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
RTN4-203ENST00000357376 KRTAP17-1Q9BYP8 105 aa3.16□□□□□ -1.9
RTN4-203ENST00000357376 LRP2P98164 4655 aa3.15□□□□□ -1.91
RTN4-203ENST00000357376 HSPG2P98160 4391 aa3.15□□□□□ -1.91
RTN4-203ENST00000357376 PKHD1L1Q86WI1 4243 aa3.11□□□□□ -1.91
RTN4-203ENST00000357376 KRTAP4-1Q9BYQ7 146 aa3.08□□□□□ -1.92
RTN4-203ENST00000357376 LPAP08519 4548 aa3.06□□□□□ -1.92
RTN4-203ENST00000357376 TNXBP22105 4242 aa3.06□□□□□ -1.92
RTN4-203ENST00000357376 KRTAP10-10P60014 251 aa3.05□□□□□ -1.92
RTN4-203ENST00000357376 EPPK1P58107 5090 aaKnown RBP2.95□□□□□ -1.94
RTN4-203ENST00000357376 HERC2O95714 4834 aa2.95□□□□□ -1.94
RTN4-203ENST00000357376 ABCA13Q86UQ4 5058 aa2.94□□□□□ -1.94
RTN4-203ENST00000357376 MUC2Q02817 5179 aa2.87□□□□□ -1.95
RTN4-203ENST00000357376 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
RTN4-203ENST00000357376 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
RTN4-203ENST00000357376 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
RTN4-203ENST00000357376 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
RTN4-203ENST00000357376 KRTAP10-12P60413 245 aa2.8□□□□□ -1.96
RTN4-203ENST00000357376 MT1HP80294 61 aa2.79□□□□□ -1.96
RTN4-203ENST00000357376 SPRR2GQ9BYE4 73 aa2.79□□□□□ -1.96
RTN4-203ENST00000357376 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
RTN4-203ENST00000357376 MT2AP02795 61 aa2.78□□□□□ -1.97
RTN4-203ENST00000357376 MT1FP04733 61 aa2.78□□□□□ -1.97
RTN4-203ENST00000357376 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
RTN4-203ENST00000357376 KRTAP19-1Q8IUB9 90 aa2.77□□□□□ -1.97
RTN4-203ENST00000357376 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
RTN4-203ENST00000357376 HERC1Q15751 4861 aa2.76□□□□□ -1.97
RTN4-203ENST00000357376 FLGP20930 4061 aaPredicted RBP2.74□□□□□ -1.97
RTN4-203ENST00000357376 LCE2CQ5TA81 110 aa2.72□□□□□ -1.97
RTN4-203ENST00000357376 BIRC6Q9NR09 4857 aa2.72□□□□□ -1.97
RTN4-203ENST00000357376 RNF213Q63HN8 5207 aa2.71□□□□□ -1.98
RTN4-203ENST00000357376 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
RTN4-203ENST00000357376 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
RTN4-203ENST00000357376 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.98
RTN4-203ENST00000357376 KRTAP9-8Q9BYQ0 159 aa2.65□□□□□ -1.99
RTN4-203ENST00000357376 KRTAP10-7P60409 375 aaPredicted RBP2.64□□□□□ -1.99
RTN4-203ENST00000357376 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
RTN4-203ENST00000357376 INE1O15225 51 aa2.63□□□□□ -1.99
RTN4-203ENST00000357376 MT1XP80297 61 aa2.63□□□□□ -1.99
RTN4-203ENST00000357376 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
RTN4-203ENST00000357376 MT1BP07438 61 aa2.62□□□□□ -1.99
RTN4-203ENST00000357376 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
RTN4-203ENST00000357376 KRTAP19-8Q3LI54 63 aa2.62□□□□□ -1.99
RTN4-203ENST00000357376 LCE2BO14633 110 aa2.61□□□□□ -1.99
RTN4-203ENST00000357376 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -2
RTN4-203ENST00000357376 LCE2AQ5TA79 106 aaPredicted RBP2.59□□□□□ -2
RTN4-203ENST00000357376 KRTAP9-3Q9BYQ3 159 aa2.53□□□□□ -2
RTN4-203ENST00000357376 CRCT1Q9UGL9 99 aa2.53□□□□□ -2
RTN4-203ENST00000357376 LCE3CQ5T5A8 94 aa2.53□□□□□ -2.01
RTN4-203ENST00000357376 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
RTN4-203ENST00000357376 KRTAP4-8Q9BYQ9 185 aa2.51□□□□□ -2.01
RTN4-203ENST00000357376 FSIP2Q5CZC0 6907 aa2.47□□□□□ -2.01
RTN4-203ENST00000357376 USH2AO75445 5202 aa2.45□□□□□ -2.02
RTN4-203ENST00000357376 KRTAP4-7Q9BYR0 210 aa2.43□□□□□ -2.02
RTN4-203ENST00000357376 KMT2DO14686 5537 aa2.42□□□□□ -2.02
RTN4-203ENST00000357376 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
RTN4-203ENST00000357376 LOC100996750A0A140TA64 210 aa2.34□□□□□ -2.04
RTN4-203ENST00000357376 KRTAP4-6Q9BYQ5 205 aa2.34□□□□□ -2.04
RTN4-203ENST00000357376 MT1GP13640 62 aa2.31□□□□□ -2.04
RTN4-203ENST00000357376 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
RTN4-203ENST00000357376 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
RTN4-203ENST00000357376 MT1LQ93083 61 aa2.31□□□□□ -2.04
RTN4-203ENST00000357376 MT1EP04732 61 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms