RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 APOBP04114 4563 aaKnown RBP6.29□□□□□ -1.4
SMARCAL1-201ENST00000357276 KRTAP10-4P60372 401 aaPredicted RBP6.28□□□□□ -1.4
SMARCAL1-201ENST00000357276 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
SMARCAL1-201ENST00000357276 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
SMARCAL1-201ENST00000357276 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
SMARCAL1-201ENST00000357276 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
SMARCAL1-201ENST00000357276 RYR3Q15413 4870 aa6.18□□□□□ -1.42
SMARCAL1-201ENST00000357276 A0A0D9SG42 100 aa6.15□□□□□ -1.43
SMARCAL1-201ENST00000357276 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
SMARCAL1-201ENST00000357276 C10orf95Q9H7T3 257 aa6.13□□□□□ -1.43
SMARCAL1-201ENST00000357276 S4R3F8 94 aa6.11□□□□□ -1.43
SMARCAL1-201ENST00000357276 TNXBP22105 4242 aa6.11□□□□□ -1.43
SMARCAL1-201ENST00000357276 HSPG2P98160 4391 aa6.11□□□□□ -1.43
SMARCAL1-201ENST00000357276 RYR1P21817 5038 aa6.1□□□□□ -1.43
SMARCAL1-201ENST00000357276 FAT3Q8TDW7 4589 aa6.1□□□□□ -1.43
SMARCAL1-201ENST00000357276 LRP1Q07954 4544 aaKnown RBP6.1□□□□□ -1.43
SMARCAL1-201ENST00000357276 Q5VSD8 79 aa6.1□□□□□ -1.43
SMARCAL1-201ENST00000357276 FAT1Q14517 4588 aa6.1□□□□□ -1.43
SMARCAL1-201ENST00000357276 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
SMARCAL1-201ENST00000357276 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
SMARCAL1-201ENST00000357276 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
SMARCAL1-201ENST00000357276 XP32Q5T750 250 aa6.04□□□□□ -1.44
SMARCAL1-201ENST00000357276 NDUFAF8A1L188 74 aa6.03□□□□□ -1.44
SMARCAL1-201ENST00000357276 KRTAP17-1Q9BYP8 105 aa6□□□□□ -1.45
SMARCAL1-201ENST00000357276 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
SMARCAL1-201ENST00000357276 EPPK1P58107 5090 aaKnown RBP5.94□□□□□ -1.46
SMARCAL1-201ENST00000357276 M0QZ58 72 aa5.92□□□□□ -1.46
SMARCAL1-201ENST00000357276 MT1HL1P0DM35 61 aa5.91□□□□□ -1.46
SMARCAL1-201ENST00000357276 KIAA1109Q2LD37 5005 aa5.9□□□□□ -1.46
SMARCAL1-201ENST00000357276 BIRC6Q9NR09 4857 aa5.82□□□□□ -1.48
SMARCAL1-201ENST00000357276 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
SMARCAL1-201ENST00000357276 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
SMARCAL1-201ENST00000357276 LPAP08519 4548 aa5.78□□□□□ -1.48
SMARCAL1-201ENST00000357276 HERC2O95714 4834 aa5.77□□□□□ -1.49
SMARCAL1-201ENST00000357276 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
SMARCAL1-201ENST00000357276 ABCA13Q86UQ4 5058 aa5.66□□□□□ -1.5
SMARCAL1-201ENST00000357276 LRP2P98164 4655 aa5.65□□□□□ -1.5
SMARCAL1-201ENST00000357276 J3QL48 77 aa5.64□□□□□ -1.51
SMARCAL1-201ENST00000357276 R4GN34 69 aa5.63□□□□□ -1.51
SMARCAL1-201ENST00000357276 LORP23490 312 aaPredicted RBP5.59□□□□□ -1.52
SMARCAL1-201ENST00000357276 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
SMARCAL1-201ENST00000357276 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
SMARCAL1-201ENST00000357276 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
SMARCAL1-201ENST00000357276 SEC61BP60468 96 aaKnown RBP5.5□□□□□ -1.53
SMARCAL1-201ENST00000357276 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
SMARCAL1-201ENST00000357276 PCLOQ9Y6V0 5065 aa5.44□□□□□ -1.54
SMARCAL1-201ENST00000357276 KRTAP19-2Q3LHN2 52 aa5.41□□□□□ -1.54
SMARCAL1-201ENST00000357276 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
SMARCAL1-201ENST00000357276 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
SMARCAL1-201ENST00000357276 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
SMARCAL1-201ENST00000357276 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
SMARCAL1-201ENST00000357276 HERC1Q15751 4861 aa5.32□□□□□ -1.56
SMARCAL1-201ENST00000357276 HMCN2Q8NDA2 5059 aa5.32□□□□□ -1.56
SMARCAL1-201ENST00000357276 TNP1P09430 55 aa5.24□□□□□ -1.57
SMARCAL1-201ENST00000357276 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
SMARCAL1-201ENST00000357276 LCE2CQ5TA81 110 aa5.09□□□□□ -1.59
SMARCAL1-201ENST00000357276 SPRR2GQ9BYE4 73 aa5.03□□□□□ -1.6
SMARCAL1-201ENST00000357276 RNF213Q63HN8 5207 aa5.03□□□□□ -1.6
SMARCAL1-201ENST00000357276 MUC2Q02817 5179 aa5.02□□□□□ -1.61
SMARCAL1-201ENST00000357276 PRO2289Q9P1D8 64 aa4.98□□□□□ -1.61
SMARCAL1-201ENST00000357276 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
SMARCAL1-201ENST00000357276 MT1HP80294 61 aa4.96□□□□□ -1.61
SMARCAL1-201ENST00000357276 LCE3AQ5TA76 89 aa4.96□□□□□ -1.61
SMARCAL1-201ENST00000357276 UBR4Q5T4S7 5183 aa4.94□□□□□ -1.62
SMARCAL1-201ENST00000357276 INE1O15225 51 aa4.91□□□□□ -1.62
SMARCAL1-201ENST00000357276 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.62
SMARCAL1-201ENST00000357276 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
SMARCAL1-201ENST00000357276 M0R2T5 61 aa4.84□□□□□ -1.64
SMARCAL1-201ENST00000357276 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
SMARCAL1-201ENST00000357276 MT2AP02795 61 aa4.78□□□□□ -1.64
SMARCAL1-201ENST00000357276 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
SMARCAL1-201ENST00000357276 LCE2AQ5TA79 106 aaPredicted RBP4.76□□□□□ -1.65
SMARCAL1-201ENST00000357276 MT1FP04733 61 aa4.74□□□□□ -1.65
SMARCAL1-201ENST00000357276 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
SMARCAL1-201ENST00000357276 KRTAP10-5P60370 271 aa4.73□□□□□ -1.65
SMARCAL1-201ENST00000357276 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
SMARCAL1-201ENST00000357276 MT1XP80297 61 aa4.71□□□□□ -1.66
SMARCAL1-201ENST00000357276 KRTAP10-10P60014 251 aa4.7□□□□□ -1.66
SMARCAL1-201ENST00000357276 MT1BP07438 61 aa4.67□□□□□ -1.66
SMARCAL1-201ENST00000357276 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
SMARCAL1-201ENST00000357276 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
SMARCAL1-201ENST00000357276 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
SMARCAL1-201ENST00000357276 LCE2BO14633 110 aa4.46□□□□□ -1.7
SMARCAL1-201ENST00000357276 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
SMARCAL1-201ENST00000357276 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
SMARCAL1-201ENST00000357276 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
SMARCAL1-201ENST00000357276 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
SMARCAL1-201ENST00000357276 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
SMARCAL1-201ENST00000357276 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
SMARCAL1-201ENST00000357276 USH2AO75445 5202 aa4.26□□□□□ -1.73
SMARCAL1-201ENST00000357276 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
SMARCAL1-201ENST00000357276 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
SMARCAL1-201ENST00000357276 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
SMARCAL1-201ENST00000357276 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
SMARCAL1-201ENST00000357276 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
SMARCAL1-201ENST00000357276 KMT2DO14686 5537 aa4.19□□□□□ -1.74
SMARCAL1-201ENST00000357276 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
SMARCAL1-201ENST00000357276 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
SMARCAL1-201ENST00000357276 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.75
SMARCAL1-201ENST00000357276 MT1LQ93083 61 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms