RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 KRTAP1-4P0C5Y4 121 aa4.61□□□□□ -1.67
GM2A-201ENST00000357164 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
GM2A-201ENST00000357164 KRTAP21-3Q3LHN1 58 aa4.59□□□□□ -1.68
GM2A-201ENST00000357164 TPRXLQ17RH7 258 aa4.57□□□□□ -1.68
GM2A-201ENST00000357164 LRP1Q07954 4544 aaKnown RBP4.57□□□□□ -1.68
GM2A-201ENST00000357164 KRTAP10-2P60368 255 aa4.55□□□□□ -1.68
GM2A-201ENST00000357164 KRTAP10-6P60371 365 aaPredicted RBP4.54□□□□□ -1.68
GM2A-201ENST00000357164 COX6B2Q6YFQ2 88 aa4.51□□□□□ -1.69
GM2A-201ENST00000357164 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
GM2A-201ENST00000357164 C10orf95Q9H7T3 257 aa4.51□□□□□ -1.69
GM2A-201ENST00000357164 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
GM2A-201ENST00000357164 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
GM2A-201ENST00000357164 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
GM2A-201ENST00000357164 RPS29P62273 56 aaKnown RBP4.48□□□□□ -1.69
GM2A-201ENST00000357164 DYNC1H1Q14204 4646 aaKnown RBP4.48□□□□□ -1.69
GM2A-201ENST00000357164 KRTAP10-1P60331 282 aa4.46□□□□□ -1.7
GM2A-201ENST00000357164 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
GM2A-201ENST00000357164 FAT1Q14517 4588 aa4.43□□□□□ -1.7
GM2A-201ENST00000357164 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
GM2A-201ENST00000357164 XP32Q5T750 250 aa4.38□□□□□ -1.71
GM2A-201ENST00000357164 RPL37P61927 97 aaKnown RBP4.37□□□□□ -1.71
GM2A-201ENST00000357164 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
GM2A-201ENST00000357164 LPAP08519 4548 aa4.33□□□□□ -1.72
GM2A-201ENST00000357164 KRTAP10-4P60372 401 aaPredicted RBP4.32□□□□□ -1.72
GM2A-201ENST00000357164 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
GM2A-201ENST00000357164 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
GM2A-201ENST00000357164 S4R3F8 94 aa4.28□□□□□ -1.72
GM2A-201ENST00000357164 DNHD1Q96M86 4753 aa4.24□□□□□ -1.73
GM2A-201ENST00000357164 KRTAP10-8P60410 259 aa4.23□□□□□ -1.73
GM2A-201ENST00000357164 M0QZ58 72 aa4.21□□□□□ -1.74
GM2A-201ENST00000357164 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
GM2A-201ENST00000357164 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
GM2A-201ENST00000357164 R4GN34 69 aa4.2□□□□□ -1.74
GM2A-201ENST00000357164 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
GM2A-201ENST00000357164 MUC17Q685J3 4493 aa4.13□□□□□ -1.75
GM2A-201ENST00000357164 FLGP20930 4061 aaPredicted RBP4.13□□□□□ -1.75
GM2A-201ENST00000357164 RYR2Q92736 4967 aa4.08□□□□□ -1.76
GM2A-201ENST00000357164 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
GM2A-201ENST00000357164 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
GM2A-201ENST00000357164 Q5VSD8 79 aa4.05□□□□□ -1.76
GM2A-201ENST00000357164 LRP2P98164 4655 aa4.04□□□□□ -1.76
GM2A-201ENST00000357164 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
GM2A-201ENST00000357164 RYR1P21817 5038 aa3.94□□□□□ -1.78
GM2A-201ENST00000357164 ABCA13Q86UQ4 5058 aa3.91□□□□□ -1.78
GM2A-201ENST00000357164 KRTAP17-1Q9BYP8 105 aa3.9□□□□□ -1.78
GM2A-201ENST00000357164 M0R2T5 61 aa3.9□□□□□ -1.79
GM2A-201ENST00000357164 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.79
GM2A-201ENST00000357164 PP632Q6XCG6 107 aa3.86□□□□□ -1.79
GM2A-201ENST00000357164 HERC1Q15751 4861 aa3.84□□□□□ -1.79
GM2A-201ENST00000357164 MT1HL1P0DM35 61 aa3.82□□□□□ -1.8
GM2A-201ENST00000357164 RYR3Q15413 4870 aa3.81□□□□□ -1.8
GM2A-201ENST00000357164 TNP1P09430 55 aa3.75□□□□□ -1.81
GM2A-201ENST00000357164 PCLOQ9Y6V0 5065 aa3.72□□□□□ -1.81
GM2A-201ENST00000357164 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
GM2A-201ENST00000357164 KIAA1109Q2LD37 5005 aa3.69□□□□□ -1.82
GM2A-201ENST00000357164 PRO2289Q9P1D8 64 aa3.68□□□□□ -1.82
GM2A-201ENST00000357164 BIRC6Q9NR09 4857 aa3.6□□□□□ -1.83
GM2A-201ENST00000357164 EPPK1P58107 5090 aaKnown RBP3.59□□□□□ -1.84
GM2A-201ENST00000357164 KRTAP4-5Q9BYR2 181 aa3.59□□□□□ -1.84
GM2A-201ENST00000357164 MUC2Q02817 5179 aa3.57□□□□□ -1.84
GM2A-201ENST00000357164 INE1O15225 51 aa3.57□□□□□ -1.84
GM2A-201ENST00000357164 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
GM2A-201ENST00000357164 KRTAP10-10P60014 251 aa3.53□□□□□ -1.84
GM2A-201ENST00000357164 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
GM2A-201ENST00000357164 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
GM2A-201ENST00000357164 UBR4Q5T4S7 5183 aa3.49□□□□□ -1.85
GM2A-201ENST00000357164 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
GM2A-201ENST00000357164 KRTAP8-1Q8IUC2 63 aa3.47□□□□□ -1.85
GM2A-201ENST00000357164 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
GM2A-201ENST00000357164 HERC2O95714 4834 aa3.46□□□□□ -1.86
GM2A-201ENST00000357164 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
GM2A-201ENST00000357164 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
GM2A-201ENST00000357164 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
GM2A-201ENST00000357164 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
GM2A-201ENST00000357164 RNF213Q63HN8 5207 aa3.34□□□□□ -1.87
GM2A-201ENST00000357164 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.88
GM2A-201ENST00000357164 KRTAP9-6A0A140TA67 174 aa3.34□□□□□ -1.88
GM2A-201ENST00000357164 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.88
GM2A-201ENST00000357164 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
GM2A-201ENST00000357164 KRTAP19-8Q3LI54 63 aa3.3□□□□□ -1.88
GM2A-201ENST00000357164 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
GM2A-201ENST00000357164 MT1XP80297 61 aa3.28□□□□□ -1.88
GM2A-201ENST00000357164 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
GM2A-201ENST00000357164 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
GM2A-201ENST00000357164 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
GM2A-201ENST00000357164 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
GM2A-201ENST00000357164 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
GM2A-201ENST00000357164 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
GM2A-201ENST00000357164 MT1BP07438 61 aa3.23□□□□□ -1.89
GM2A-201ENST00000357164 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.9
GM2A-201ENST00000357164 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
GM2A-201ENST00000357164 MT1FP04733 61 aa3.2□□□□□ -1.9
GM2A-201ENST00000357164 KRTAP19-4Q3LI73 84 aa3.2□□□□□ -1.9
GM2A-201ENST00000357164 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
GM2A-201ENST00000357164 MT2AP02795 61 aa3.17□□□□□ -1.9
GM2A-201ENST00000357164 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
GM2A-201ENST00000357164 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
GM2A-201ENST00000357164 MT1HP80294 61 aa3.14□□□□□ -1.91
GM2A-201ENST00000357164 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
GM2A-201ENST00000357164 KMT2DO14686 5537 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms