RNA–Protein interactions for RNA: ENST00000357037.5

CAVIN1-201, Transcript of caveolae associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAVIN1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN1-201ENST00000357037 FAT2Q9NYQ8 4349 aa7.85□□□□□ -1.15
CAVIN1-201ENST00000357037 LRP1Q07954 4544 aaKnown RBP7.81□□□□□ -1.16
CAVIN1-201ENST00000357037 H0YAA0 97 aa7.8□□□□□ -1.16
CAVIN1-201ENST00000357037 A0A0A0MQY5 61 aa7.8□□□□□ -1.16
CAVIN1-201ENST00000357037 KMT2CQ8NEZ4 4911 aaKnown RBP7.79□□□□□ -1.16
CAVIN1-201ENST00000357037 APOBP04114 4563 aaKnown RBP7.79□□□□□ -1.16
CAVIN1-201ENST00000357037 PKD1P98161 4303 aa7.77□□□□□ -1.16
CAVIN1-201ENST00000357037 KIAA1109Q2LD37 5005 aa7.76□□□□□ -1.17
CAVIN1-201ENST00000357037 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
CAVIN1-201ENST00000357037 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
CAVIN1-201ENST00000357037 P0C880 135 aa7.65□□□□□ -1.18
CAVIN1-201ENST00000357037 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.18
CAVIN1-201ENST00000357037 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
CAVIN1-201ENST00000357037 RYR1P21817 5038 aa7.64□□□□□ -1.19
CAVIN1-201ENST00000357037 RYR2Q92736 4967 aa7.64□□□□□ -1.19
CAVIN1-201ENST00000357037 RYR3Q15413 4870 aa7.63□□□□□ -1.19
CAVIN1-201ENST00000357037 KRTAP17-1Q9BYP8 105 aa7.6□□□□□ -1.19
CAVIN1-201ENST00000357037 R4GN34 69 aa7.6□□□□□ -1.19
CAVIN1-201ENST00000357037 M0QZ58 72 aa7.59□□□□□ -1.19
CAVIN1-201ENST00000357037 TPRXLQ17RH7 258 aa7.57□□□□□ -1.2
CAVIN1-201ENST00000357037 ROMO1P60602 79 aa7.54□□□□□ -1.2
CAVIN1-201ENST00000357037 KRTAP13-4Q3LI77 160 aa7.49□□□□□ -1.21
CAVIN1-201ENST00000357037 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
CAVIN1-201ENST00000357037 KRTAP10-6P60371 365 aaPredicted RBP7.46□□□□□ -1.22
CAVIN1-201ENST00000357037 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.22
CAVIN1-201ENST00000357037 C10orf95Q9H7T3 257 aa7.43□□□□□ -1.22
CAVIN1-201ENST00000357037 HSPG2P98160 4391 aa7.4□□□□□ -1.22
CAVIN1-201ENST00000357037 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.23
CAVIN1-201ENST00000357037 M0R2T5 61 aa7.39□□□□□ -1.23
CAVIN1-201ENST00000357037 LRP2P98164 4655 aa7.37□□□□□ -1.23
CAVIN1-201ENST00000357037 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
CAVIN1-201ENST00000357037 KRTAP12-2P59991 146 aa7.33□□□□□ -1.24
CAVIN1-201ENST00000357037 PKHD1L1Q86WI1 4243 aa7.31□□□□□ -1.24
CAVIN1-201ENST00000357037 EPPK1P58107 5090 aaKnown RBP7.28□□□□□ -1.24
CAVIN1-201ENST00000357037 LPAP08519 4548 aa7.23□□□□□ -1.25
CAVIN1-201ENST00000357037 KRTAP12-1P59990 96 aa7.21□□□□□ -1.26
CAVIN1-201ENST00000357037 TNXBP22105 4242 aa7.18□□□□□ -1.26
CAVIN1-201ENST00000357037 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
CAVIN1-201ENST00000357037 HERC2O95714 4834 aa7.12□□□□□ -1.27
CAVIN1-201ENST00000357037 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
CAVIN1-201ENST00000357037 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
CAVIN1-201ENST00000357037 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
CAVIN1-201ENST00000357037 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
CAVIN1-201ENST00000357037 MUC2Q02817 5179 aa6.91□□□□□ -1.3
CAVIN1-201ENST00000357037 LUZP6Q538Z0 58 aa6.9□□□□□ -1.3
CAVIN1-201ENST00000357037 KRTAP10-10P60014 251 aa6.86□□□□□ -1.31
CAVIN1-201ENST00000357037 TNP1P09430 55 aa6.8□□□□□ -1.32
CAVIN1-201ENST00000357037 HERC1Q15751 4861 aa6.75□□□□□ -1.33
CAVIN1-201ENST00000357037 BIRC6Q9NR09 4857 aa6.71□□□□□ -1.33
CAVIN1-201ENST00000357037 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
CAVIN1-201ENST00000357037 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
CAVIN1-201ENST00000357037 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
CAVIN1-201ENST00000357037 PCLOQ9Y6V0 5065 aa6.56□□□□□ -1.36
CAVIN1-201ENST00000357037 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
CAVIN1-201ENST00000357037 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
CAVIN1-201ENST00000357037 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
CAVIN1-201ENST00000357037 MT1HP80294 61 aa6.46□□□□□ -1.37
CAVIN1-201ENST00000357037 UBR4Q5T4S7 5183 aa6.45□□□□□ -1.38
CAVIN1-201ENST00000357037 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
CAVIN1-201ENST00000357037 MT1FP04733 61 aa6.37□□□□□ -1.39
CAVIN1-201ENST00000357037 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
CAVIN1-201ENST00000357037 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
CAVIN1-201ENST00000357037 MT2AP02795 61 aa6.36□□□□□ -1.39
CAVIN1-201ENST00000357037 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
CAVIN1-201ENST00000357037 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
CAVIN1-201ENST00000357037 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
CAVIN1-201ENST00000357037 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
CAVIN1-201ENST00000357037 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
CAVIN1-201ENST00000357037 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
CAVIN1-201ENST00000357037 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
CAVIN1-201ENST00000357037 FSIP2Q5CZC0 6907 aa6□□□□□ -1.45
CAVIN1-201ENST00000357037 MT1BP07438 61 aa5.99□□□□□ -1.45
CAVIN1-201ENST00000357037 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
CAVIN1-201ENST00000357037 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
CAVIN1-201ENST00000357037 MT1XP80297 61 aa5.94□□□□□ -1.46
CAVIN1-201ENST00000357037 KRTAP10-7P60409 375 aaPredicted RBP5.93□□□□□ -1.46
CAVIN1-201ENST00000357037 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
CAVIN1-201ENST00000357037 KRTAP9-3Q9BYQ3 159 aa5.89□□□□□ -1.47
CAVIN1-201ENST00000357037 USH2AO75445 5202 aa5.88□□□□□ -1.47
CAVIN1-201ENST00000357037 KRTAP8-1Q8IUC2 63 aa5.8□□□□□ -1.48
CAVIN1-201ENST00000357037 LCE2BO14633 110 aa5.78□□□□□ -1.48
CAVIN1-201ENST00000357037 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
CAVIN1-201ENST00000357037 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
CAVIN1-201ENST00000357037 KRTAP4-8Q9BYQ9 185 aa5.73□□□□□ -1.49
CAVIN1-201ENST00000357037 KMT2DO14686 5537 aa5.68□□□□□ -1.5
CAVIN1-201ENST00000357037 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
CAVIN1-201ENST00000357037 CRCT1Q9UGL9 99 aa5.55□□□□□ -1.52
CAVIN1-201ENST00000357037 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
CAVIN1-201ENST00000357037 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
CAVIN1-201ENST00000357037 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
CAVIN1-201ENST00000357037 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
CAVIN1-201ENST00000357037 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
CAVIN1-201ENST00000357037 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
CAVIN1-201ENST00000357037 INE1O15225 51 aa5.21□□□□□ -1.57
CAVIN1-201ENST00000357037 SSPOA2VEC9 5147 aa5.21□□□□□ -1.58
CAVIN1-201ENST00000357037 MT1EP04732 61 aa5.17□□□□□ -1.58
CAVIN1-201ENST00000357037 MT1LQ93083 61 aa5.17□□□□□ -1.58
CAVIN1-201ENST00000357037 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
CAVIN1-201ENST00000357037 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
CAVIN1-201ENST00000357037 MUC12Q9UKN1 5478 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms