RNA–Protein interactions for RNA: ENST00000356970.6

CLCC1-203, Transcript of chloride channel CLIC like 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLCC1, Length 4,803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-203ENST00000356970 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
CLCC1-203ENST00000356970 KRTAP21-3Q3LHN1 58 aa3.88□□□□□ -1.79
CLCC1-203ENST00000356970 RPL37P61927 97 aaKnown RBP3.88□□□□□ -1.79
CLCC1-203ENST00000356970 MYCBP2O75592 4640 aa3.87□□□□□ -1.79
CLCC1-203ENST00000356970 HSPG2P98160 4391 aa3.86□□□□□ -1.79
CLCC1-203ENST00000356970 ROMO1P60602 79 aa3.85□□□□□ -1.79
CLCC1-203ENST00000356970 XP32Q5T750 250 aa3.84□□□□□ -1.79
CLCC1-203ENST00000356970 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.8
CLCC1-203ENST00000356970 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
CLCC1-203ENST00000356970 TNXBP22105 4242 aa3.83□□□□□ -1.8
CLCC1-203ENST00000356970 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
CLCC1-203ENST00000356970 RYR3Q15413 4870 aa3.79□□□□□ -1.8
CLCC1-203ENST00000356970 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
CLCC1-203ENST00000356970 KRTAP3-3Q9BYR6 98 aa3.78□□□□□ -1.8
CLCC1-203ENST00000356970 P0C880 135 aa3.78□□□□□ -1.8
CLCC1-203ENST00000356970 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
CLCC1-203ENST00000356970 KRTAP17-1Q9BYP8 105 aa3.77□□□□□ -1.81
CLCC1-203ENST00000356970 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
CLCC1-203ENST00000356970 H3BS24 57 aa3.77□□□□□ -1.81
CLCC1-203ENST00000356970 RYR1P21817 5038 aa3.76□□□□□ -1.81
CLCC1-203ENST00000356970 KRTAP3-2Q9BYR7 98 aa3.74□□□□□ -1.81
CLCC1-203ENST00000356970 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
CLCC1-203ENST00000356970 LPAP08519 4548 aa3.71□□□□□ -1.81
CLCC1-203ENST00000356970 LRP2P98164 4655 aa3.71□□□□□ -1.82
CLCC1-203ENST00000356970 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
CLCC1-203ENST00000356970 MT1HL1P0DM35 61 aa3.68□□□□□ -1.82
CLCC1-203ENST00000356970 M0QZ58 72 aa3.68□□□□□ -1.82
CLCC1-203ENST00000356970 TPRXLQ17RH7 258 aa3.68□□□□□ -1.82
CLCC1-203ENST00000356970 R4GN34 69 aa3.66□□□□□ -1.82
CLCC1-203ENST00000356970 J3QL48 77 aa3.66□□□□□ -1.82
CLCC1-203ENST00000356970 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
CLCC1-203ENST00000356970 KRTAP12-1P59990 96 aa3.65□□□□□ -1.82
CLCC1-203ENST00000356970 ABCA13Q86UQ4 5058 aa3.64□□□□□ -1.83
CLCC1-203ENST00000356970 SEC61BP60468 96 aaKnown RBP3.63□□□□□ -1.83
CLCC1-203ENST00000356970 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
CLCC1-203ENST00000356970 KRTAP4-5Q9BYR2 181 aa3.55□□□□□ -1.84
CLCC1-203ENST00000356970 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
CLCC1-203ENST00000356970 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
CLCC1-203ENST00000356970 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
CLCC1-203ENST00000356970 LORP23490 312 aaPredicted RBP3.47□□□□□ -1.85
CLCC1-203ENST00000356970 MUC17Q685J3 4493 aa3.47□□□□□ -1.85
CLCC1-203ENST00000356970 HERC2O95714 4834 aa3.46□□□□□ -1.86
CLCC1-203ENST00000356970 MUC2Q02817 5179 aa3.45□□□□□ -1.86
CLCC1-203ENST00000356970 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
CLCC1-203ENST00000356970 M0R2T5 61 aa3.42□□□□□ -1.86
CLCC1-203ENST00000356970 PLAC4Q8WY50 150 aa3.42□□□□□ -1.86
CLCC1-203ENST00000356970 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
CLCC1-203ENST00000356970 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
CLCC1-203ENST00000356970 KRTAP19-2Q3LHN2 52 aa3.36□□□□□ -1.87
CLCC1-203ENST00000356970 HERC1Q15751 4861 aa3.34□□□□□ -1.87
CLCC1-203ENST00000356970 TNP1P09430 55 aa3.34□□□□□ -1.87
CLCC1-203ENST00000356970 FLGP20930 4061 aaPredicted RBP3.3□□□□□ -1.88
CLCC1-203ENST00000356970 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
CLCC1-203ENST00000356970 BIRC6Q9NR09 4857 aa3.29□□□□□ -1.88
CLCC1-203ENST00000356970 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
CLCC1-203ENST00000356970 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
CLCC1-203ENST00000356970 RNF213Q63HN8 5207 aa3.21□□□□□ -1.89
CLCC1-203ENST00000356970 KRTAP10-10P60014 251 aa3.19□□□□□ -1.9
CLCC1-203ENST00000356970 LCE2DQ5TA82 110 aaPredicted RBP3.17□□□□□ -1.9
CLCC1-203ENST00000356970 LCE2CQ5TA81 110 aa3.16□□□□□ -1.9
CLCC1-203ENST00000356970 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.9
CLCC1-203ENST00000356970 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.9
CLCC1-203ENST00000356970 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
CLCC1-203ENST00000356970 KRTAP19-1Q8IUB9 90 aa3.1□□□□□ -1.91
CLCC1-203ENST00000356970 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
CLCC1-203ENST00000356970 MT1HP80294 61 aa3.09□□□□□ -1.91
CLCC1-203ENST00000356970 MT1FP04733 61 aa3.06□□□□□ -1.92
CLCC1-203ENST00000356970 MT2AP02795 61 aa3.06□□□□□ -1.92
CLCC1-203ENST00000356970 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
CLCC1-203ENST00000356970 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
CLCC1-203ENST00000356970 KRTAP10-12P60413 245 aa2.98□□□□□ -1.93
CLCC1-203ENST00000356970 KRTAP19-8Q3LI54 63 aa2.96□□□□□ -1.94
CLCC1-203ENST00000356970 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
CLCC1-203ENST00000356970 PRO2289Q9P1D8 64 aa2.96□□□□□ -1.94
CLCC1-203ENST00000356970 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
CLCC1-203ENST00000356970 MT1BP07438 61 aa2.94□□□□□ -1.94
CLCC1-203ENST00000356970 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
CLCC1-203ENST00000356970 MT1XP80297 61 aa2.93□□□□□ -1.94
CLCC1-203ENST00000356970 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
CLCC1-203ENST00000356970 USH2AO75445 5202 aa2.86□□□□□ -1.95
CLCC1-203ENST00000356970 KRTAP9-3Q9BYQ3 159 aa2.86□□□□□ -1.95
CLCC1-203ENST00000356970 KMT2DO14686 5537 aa2.81□□□□□ -1.96
CLCC1-203ENST00000356970 INE1O15225 51 aa2.81□□□□□ -1.96
CLCC1-203ENST00000356970 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
CLCC1-203ENST00000356970 LOC100996750A0A140TA64 210 aa2.77□□□□□ -1.97
CLCC1-203ENST00000356970 KRTAP4-6Q9BYQ5 205 aa2.77□□□□□ -1.97
CLCC1-203ENST00000356970 LCE2BO14633 110 aa2.77□□□□□ -1.97
CLCC1-203ENST00000356970 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
CLCC1-203ENST00000356970 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
CLCC1-203ENST00000356970 KRTAP4-8Q9BYQ9 185 aa2.72□□□□□ -1.97
CLCC1-203ENST00000356970 LCE2AQ5TA79 106 aaPredicted RBP2.7□□□□□ -1.98
CLCC1-203ENST00000356970 FSIP2Q5CZC0 6907 aa2.62□□□□□ -1.99
CLCC1-203ENST00000356970 KRTAP4-7Q9BYR0 210 aa2.62□□□□□ -1.99
CLCC1-203ENST00000356970 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
CLCC1-203ENST00000356970 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
CLCC1-203ENST00000356970 KRTAP9-6A8MVA2 160 aa2.59□□□□□ -1.99
CLCC1-203ENST00000356970 MT1LQ93083 61 aa2.56□□□□□ -2
CLCC1-203ENST00000356970 MT1EP04732 61 aa2.54□□□□□ -2
CLCC1-203ENST00000356970 KRTAP19-4Q3LI73 84 aa2.53□□□□□ -2
CLCC1-203ENST00000356970 CRCT1Q9UGL9 99 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms