RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 A0A0A0MQY5 61 aa9.37□□□□□ -0.91
GYPC-202ENST00000356887 P0C880 135 aa9.35□□□□□ -0.91
GYPC-202ENST00000356887 BIRC6Q9NR09 4857 aa9.33□□□□□ -0.92
GYPC-202ENST00000356887 H0YAA0 97 aa9.33□□□□□ -0.92
GYPC-202ENST00000356887 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
GYPC-202ENST00000356887 COX6B2Q6YFQ2 88 aa9.32□□□□□ -0.92
GYPC-202ENST00000356887 A0A1B0GU33 70 aa9.3□□□□□ -0.92
GYPC-202ENST00000356887 H1FX-AS1Q4G0G2 97 aa9.27□□□□□ -0.93
GYPC-202ENST00000356887 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
GYPC-202ENST00000356887 LRP1Q07954 4544 aaKnown RBP9.2□□□□□ -0.94
GYPC-202ENST00000356887 TNXBP22105 4242 aa9.2□□□□□ -0.94
GYPC-202ENST00000356887 FAT3Q8TDW7 4589 aa9.2□□□□□ -0.94
GYPC-202ENST00000356887 HERC2O95714 4834 aa9.16□□□□□ -0.94
GYPC-202ENST00000356887 RPL37P61927 97 aaKnown RBP9.14□□□□□ -0.95
GYPC-202ENST00000356887 KRTAP4-5Q9BYR2 181 aa9.14□□□□□ -0.95
GYPC-202ENST00000356887 MYCBP2O75592 4640 aa9.1□□□□□ -0.95
GYPC-202ENST00000356887 KRTAP3-3Q9BYR6 98 aa9.09□□□□□ -0.95
GYPC-202ENST00000356887 XP32Q5T750 250 aa9.08□□□□□ -0.96
GYPC-202ENST00000356887 ABCA13Q86UQ4 5058 aa9.04□□□□□ -0.96
GYPC-202ENST00000356887 K7ERS5 55 aa9.02□□□□□ -0.97
GYPC-202ENST00000356887 MT1HL1P0DM35 61 aa9.02□□□□□ -0.97
GYPC-202ENST00000356887 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
GYPC-202ENST00000356887 DMBT1Q9UGM3 2413 aaPredicted RBP8.98□□□□□ -0.97
GYPC-202ENST00000356887 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
GYPC-202ENST00000356887 S4R3F8 94 aa8.97□□□□□ -0.97
GYPC-202ENST00000356887 NDUFAF8A1L188 74 aa8.96□□□□□ -0.97
GYPC-202ENST00000356887 SPINT4Q6UDR6 99 aa8.96□□□□□ -0.98
GYPC-202ENST00000356887 KRTAP15-1Q3LI76 137 aa8.95□□□□□ -0.98
GYPC-202ENST00000356887 KRTAP13-4Q3LI77 160 aa8.92□□□□□ -0.98
GYPC-202ENST00000356887 PCLOQ9Y6V0 5065 aa8.87□□□□□ -0.99
GYPC-202ENST00000356887 A0A0D9SG42 100 aa8.81□□□□□ -1
GYPC-202ENST00000356887 CRIPTQ9P021 101 aa8.76□□□□□ -1.01
GYPC-202ENST00000356887 TPRXLQ17RH7 258 aa8.73□□□□□ -1.01
GYPC-202ENST00000356887 LUZP6Q538Z0 58 aa8.73□□□□□ -1.01
GYPC-202ENST00000356887 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
GYPC-202ENST00000356887 LPAP08519 4548 aa8.62□□□□□ -1.03
GYPC-202ENST00000356887 LRP2P98164 4655 aa8.59□□□□□ -1.03
GYPC-202ENST00000356887 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
GYPC-202ENST00000356887 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
GYPC-202ENST00000356887 M0QZ58 72 aa8.55□□□□□ -1.04
GYPC-202ENST00000356887 HERC1Q15751 4861 aa8.54□□□□□ -1.04
GYPC-202ENST00000356887 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
GYPC-202ENST00000356887 HMCN2Q8NDA2 5059 aa8.41□□□□□ -1.06
GYPC-202ENST00000356887 KRTAP4-1Q9BYQ7 146 aa8.31□□□□□ -1.08
GYPC-202ENST00000356887 MUC17Q685J3 4493 aa8.3□□□□□ -1.08
GYPC-202ENST00000356887 R4GN34 69 aa8.3□□□□□ -1.08
GYPC-202ENST00000356887 LORP23490 312 aaPredicted RBP8.23□□□□□ -1.09
GYPC-202ENST00000356887 KRTAP19-2Q3LHN2 52 aa8.2□□□□□ -1.1
GYPC-202ENST00000356887 UBR4Q5T4S7 5183 aa8.09□□□□□ -1.11
GYPC-202ENST00000356887 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
GYPC-202ENST00000356887 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
GYPC-202ENST00000356887 MUC2Q02817 5179 aa8.02□□□□□ -1.13
GYPC-202ENST00000356887 RNF213Q63HN8 5207 aa7.94□□□□□ -1.14
GYPC-202ENST00000356887 FLGP20930 4061 aaPredicted RBP7.93□□□□□ -1.14
GYPC-202ENST00000356887 PP632Q6XCG6 107 aa7.8□□□□□ -1.16
GYPC-202ENST00000356887 LCE2DQ5TA82 110 aaPredicted RBP7.76□□□□□ -1.17
GYPC-202ENST00000356887 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
GYPC-202ENST00000356887 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
GYPC-202ENST00000356887 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.18
GYPC-202ENST00000356887 KRTAP23-1A1A580 65 aa7.69□□□□□ -1.18
GYPC-202ENST00000356887 TNP1P09430 55 aa7.61□□□□□ -1.19
GYPC-202ENST00000356887 MT1HP80294 61 aa7.6□□□□□ -1.19
GYPC-202ENST00000356887 SPRR2GQ9BYE4 73 aa7.56□□□□□ -1.2
GYPC-202ENST00000356887 M0R2T5 61 aa7.53□□□□□ -1.2
GYPC-202ENST00000356887 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
GYPC-202ENST00000356887 SPRR5A0A1B0GTR4 108 aa7.5□□□□□ -1.21
GYPC-202ENST00000356887 INE1O15225 51 aa7.48□□□□□ -1.21
GYPC-202ENST00000356887 LCE2AQ5TA79 106 aaPredicted RBP7.41□□□□□ -1.22
GYPC-202ENST00000356887 MT2AP02795 61 aa7.35□□□□□ -1.23
GYPC-202ENST00000356887 MT1FP04733 61 aa7.34□□□□□ -1.23
GYPC-202ENST00000356887 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
GYPC-202ENST00000356887 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
GYPC-202ENST00000356887 KRTAP19-8Q3LI54 63 aa7.23□□□□□ -1.25
GYPC-202ENST00000356887 LCE3AQ5TA76 89 aa7.21□□□□□ -1.25
GYPC-202ENST00000356887 MT1BP07438 61 aa7.12□□□□□ -1.27
GYPC-202ENST00000356887 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
GYPC-202ENST00000356887 MT1XP80297 61 aa7.07□□□□□ -1.28
GYPC-202ENST00000356887 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
GYPC-202ENST00000356887 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
GYPC-202ENST00000356887 LCE2BO14633 110 aa7□□□□□ -1.29
GYPC-202ENST00000356887 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
GYPC-202ENST00000356887 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
GYPC-202ENST00000356887 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
GYPC-202ENST00000356887 USH2AO75445 5202 aa6.72□□□□□ -1.33
GYPC-202ENST00000356887 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
GYPC-202ENST00000356887 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
GYPC-202ENST00000356887 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.35
GYPC-202ENST00000356887 SSPOA2VEC9 5147 aa6.55□□□□□ -1.36
GYPC-202ENST00000356887 LCE3CQ5T5A8 94 aa6.49□□□□□ -1.37
GYPC-202ENST00000356887 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
GYPC-202ENST00000356887 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
GYPC-202ENST00000356887 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
GYPC-202ENST00000356887 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.39
GYPC-202ENST00000356887 KMT2DO14686 5537 aa6.32□□□□□ -1.4
GYPC-202ENST00000356887 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
GYPC-202ENST00000356887 FCGBPQ9Y6R7 5405 aaPredicted RBP6.3□□□□□ -1.4
GYPC-202ENST00000356887 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
GYPC-202ENST00000356887 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
GYPC-202ENST00000356887 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
GYPC-202ENST00000356887 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms