RNA–Protein interactions for RNA: ENST00000356825.8

SMAD2-202, Transcript of SMAD family member 2, humanhuman

TSL 1 (best) BASIC

Gene SMAD2, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-202ENST00000356825 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
SMAD2-202ENST00000356825 ANK3Q12955 4377 aaKnown RBP6.21□□□□□ -1.41
SMAD2-202ENST00000356825 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.41
SMAD2-202ENST00000356825 HECTD4Q9Y4D8 3996 aa6.17□□□□□ -1.42
SMAD2-202ENST00000356825 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
SMAD2-202ENST00000356825 FRAS1Q86XX4 4008 aa6.16□□□□□ -1.42
SMAD2-202ENST00000356825 DNAH1Q9P2D7 4330 aa6.16□□□□□ -1.42
SMAD2-202ENST00000356825 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
SMAD2-202ENST00000356825 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
SMAD2-202ENST00000356825 KMT2AQ03164 3969 aa6.15□□□□□ -1.43
SMAD2-202ENST00000356825 HUWE1Q7Z6Z7 4374 aaKnown RBP6.14□□□□□ -1.43
SMAD2-202ENST00000356825 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
SMAD2-202ENST00000356825 VPS13BQ7Z7G8 4022 aa6.09□□□□□ -1.44
SMAD2-202ENST00000356825 KRTAP4-5Q9BYR2 181 aa6.05□□□□□ -1.44
SMAD2-202ENST00000356825 DNAH2Q9P225 4427 aa6.05□□□□□ -1.44
SMAD2-202ENST00000356825 LORP23490 312 aaPredicted RBP6.03□□□□□ -1.44
SMAD2-202ENST00000356825 DNAH6Q9C0G6 4158 aa5.95□□□□□ -1.46
SMAD2-202ENST00000356825 KRTAP10-4P60372 401 aaPredicted RBP5.88□□□□□ -1.47
SMAD2-202ENST00000356825 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
SMAD2-202ENST00000356825 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
SMAD2-202ENST00000356825 PRKDCP78527 4128 aaKnown RBP5.71□□□□□ -1.5
SMAD2-202ENST00000356825 MT1HP80294 61 aa5.63□□□□□ -1.51
SMAD2-202ENST00000356825 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
SMAD2-202ENST00000356825 FAT2Q9NYQ8 4349 aa5.62□□□□□ -1.51
SMAD2-202ENST00000356825 SPRR2GQ9BYE4 73 aa5.55□□□□□ -1.52
SMAD2-202ENST00000356825 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
SMAD2-202ENST00000356825 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
SMAD2-202ENST00000356825 DNAH9Q9NYC9 4486 aa5.5□□□□□ -1.53
SMAD2-202ENST00000356825 SPRR2EP22531 72 aa5.45□□□□□ -1.54
SMAD2-202ENST00000356825 SPRR2BP35325 72 aa5.45□□□□□ -1.54
SMAD2-202ENST00000356825 SPRR2AP35326 72 aa5.45□□□□□ -1.54
SMAD2-202ENST00000356825 MT2AP02795 61 aa5.44□□□□□ -1.54
SMAD2-202ENST00000356825 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
SMAD2-202ENST00000356825 VPS13DQ5THJ4 4388 aa5.41□□□□□ -1.54
SMAD2-202ENST00000356825 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.55
SMAD2-202ENST00000356825 DYNC2H1Q8NCM8 4307 aaKnown RBP5.39□□□□□ -1.55
SMAD2-202ENST00000356825 DNAH10Q8IVF4 4471 aa5.39□□□□□ -1.55
SMAD2-202ENST00000356825 MT1FP04733 61 aa5.31□□□□□ -1.56
SMAD2-202ENST00000356825 SPRR2DP22532 72 aa5.3□□□□□ -1.56
SMAD2-202ENST00000356825 PKHD1P08F94 4074 aa5.3□□□□□ -1.56
SMAD2-202ENST00000356825 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
SMAD2-202ENST00000356825 LCE2BO14633 110 aa5.27□□□□□ -1.57
SMAD2-202ENST00000356825 DNAH11Q96DT5 4516 aa5.27□□□□□ -1.57
SMAD2-202ENST00000356825 KRTAP12-4P60329 112 aa5.26□□□□□ -1.57
SMAD2-202ENST00000356825 PKHD1L1Q86WI1 4243 aa5.24□□□□□ -1.57
SMAD2-202ENST00000356825 STARD9Q9P2P6 4700 aa5.21□□□□□ -1.58
SMAD2-202ENST00000356825 DNAH17Q9UFH2 4485 aa5.2□□□□□ -1.58
SMAD2-202ENST00000356825 DNAH8Q96JB1 4490 aa5.18□□□□□ -1.58
SMAD2-202ENST00000356825 MT1GP13640 62 aa5.04□□□□□ -1.6
SMAD2-202ENST00000356825 PLECQ15149 4684 aaKnown RBP5.01□□□□□ -1.61
SMAD2-202ENST00000356825 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
SMAD2-202ENST00000356825 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
SMAD2-202ENST00000356825 DNAH5Q8TE73 4624 aa4.93□□□□□ -1.62
SMAD2-202ENST00000356825 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
SMAD2-202ENST00000356825 PKD1P98161 4303 aa4.91□□□□□ -1.62
SMAD2-202ENST00000356825 MT1XP80297 61 aa4.9□□□□□ -1.62
SMAD2-202ENST00000356825 LRP1BQ9NZR2 4599 aa4.83□□□□□ -1.64
SMAD2-202ENST00000356825 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
SMAD2-202ENST00000356825 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
SMAD2-202ENST00000356825 TNXBP22105 4242 aa4.82□□□□□ -1.64
SMAD2-202ENST00000356825 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
SMAD2-202ENST00000356825 APOBP04114 4563 aaKnown RBP4.74□□□□□ -1.65
SMAD2-202ENST00000356825 LRP1Q07954 4544 aaKnown RBP4.72□□□□□ -1.65
SMAD2-202ENST00000356825 MT4P47944 62 aa4.7□□□□□ -1.66
SMAD2-202ENST00000356825 KRTAP4-8A0A0G2JLE6 195 aa4.69□□□□□ -1.66
SMAD2-202ENST00000356825 KRTAP4-8Q9BYQ9 185 aa4.69□□□□□ -1.66
SMAD2-202ENST00000356825 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
SMAD2-202ENST00000356825 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
SMAD2-202ENST00000356825 MT1BP07438 61 aa4.65□□□□□ -1.67
SMAD2-202ENST00000356825 DYNC1H1Q14204 4646 aaKnown RBP4.65□□□□□ -1.67
SMAD2-202ENST00000356825 HSPG2P98160 4391 aa4.64□□□□□ -1.67
SMAD2-202ENST00000356825 MT1LQ93083 61 aa4.6□□□□□ -1.67
SMAD2-202ENST00000356825 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
SMAD2-202ENST00000356825 FAT1Q14517 4588 aa4.58□□□□□ -1.68
SMAD2-202ENST00000356825 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
SMAD2-202ENST00000356825 MT3P25713 68 aa4.53□□□□□ -1.68
SMAD2-202ENST00000356825 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SMAD2-202ENST00000356825 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
SMAD2-202ENST00000356825 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
SMAD2-202ENST00000356825 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
SMAD2-202ENST00000356825 MT1EP04732 61 aa4.46□□□□□ -1.7
SMAD2-202ENST00000356825 PRM1P04553 51 aa4.45□□□□□ -1.7
SMAD2-202ENST00000356825 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
SMAD2-202ENST00000356825 LPAP08519 4548 aa4.41□□□□□ -1.7
SMAD2-202ENST00000356825 MT1MQ8N339 61 aa4.38□□□□□ -1.71
SMAD2-202ENST00000356825 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
SMAD2-202ENST00000356825 KRTAP17-1Q9BYP8 105 aa4.36□□□□□ -1.71
SMAD2-202ENST00000356825 MYCBP2O75592 4640 aa4.29□□□□□ -1.72
SMAD2-202ENST00000356825 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
SMAD2-202ENST00000356825 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
SMAD2-202ENST00000356825 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
SMAD2-202ENST00000356825 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
SMAD2-202ENST00000356825 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
SMAD2-202ENST00000356825 DNHD1Q96M86 4753 aa4.14□□□□□ -1.75
SMAD2-202ENST00000356825 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
SMAD2-202ENST00000356825 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
SMAD2-202ENST00000356825 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
SMAD2-202ENST00000356825 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
SMAD2-202ENST00000356825 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
SMAD2-202ENST00000356825 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms