RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 HSPG2P98160 4391 aa5.28□□□□□ -1.56
PTPRA-203ENST00000356147 PKHD1L1Q86WI1 4243 aa5.26□□□□□ -1.57
PTPRA-203ENST00000356147 APOBP04114 4563 aaKnown RBP5.26□□□□□ -1.57
PTPRA-203ENST00000356147 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
PTPRA-203ENST00000356147 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
PTPRA-203ENST00000356147 KRTAP10-8P60410 259 aa5.23□□□□□ -1.57
PTPRA-203ENST00000356147 KRTAP10-4P60372 401 aaPredicted RBP5.23□□□□□ -1.57
PTPRA-203ENST00000356147 KRTAP3-3Q9BYR6 98 aa5.23□□□□□ -1.57
PTPRA-203ENST00000356147 P0C880 135 aa5.22□□□□□ -1.57
PTPRA-203ENST00000356147 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.57
PTPRA-203ENST00000356147 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
PTPRA-203ENST00000356147 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
PTPRA-203ENST00000356147 KMT2CQ8NEZ4 4911 aaKnown RBP5.19□□□□□ -1.58
PTPRA-203ENST00000356147 SPINT4Q6UDR6 99 aa5.18□□□□□ -1.58
PTPRA-203ENST00000356147 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
PTPRA-203ENST00000356147 LPAP08519 4548 aa5.15□□□□□ -1.59
PTPRA-203ENST00000356147 S4R3F8 94 aa5.14□□□□□ -1.59
PTPRA-203ENST00000356147 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
PTPRA-203ENST00000356147 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
PTPRA-203ENST00000356147 TNXBP22105 4242 aa5.11□□□□□ -1.59
PTPRA-203ENST00000356147 XP32Q5T750 250 aa5.09□□□□□ -1.59
PTPRA-203ENST00000356147 RYR3Q15413 4870 aa5.05□□□□□ -1.6
PTPRA-203ENST00000356147 LRP2P98164 4655 aa5.04□□□□□ -1.6
PTPRA-203ENST00000356147 RYR2Q92736 4967 aa5.04□□□□□ -1.6
PTPRA-203ENST00000356147 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
PTPRA-203ENST00000356147 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
PTPRA-203ENST00000356147 Q5VSD8 79 aa5.01□□□□□ -1.61
PTPRA-203ENST00000356147 KRTAP17-1Q9BYP8 105 aa4.99□□□□□ -1.61
PTPRA-203ENST00000356147 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
PTPRA-203ENST00000356147 KIAA1109Q2LD37 5005 aa4.96□□□□□ -1.62
PTPRA-203ENST00000356147 RYR1P21817 5038 aa4.92□□□□□ -1.62
PTPRA-203ENST00000356147 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
PTPRA-203ENST00000356147 EPPK1P58107 5090 aaKnown RBP4.89□□□□□ -1.63
PTPRA-203ENST00000356147 M0QZ58 72 aa4.88□□□□□ -1.63
PTPRA-203ENST00000356147 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
PTPRA-203ENST00000356147 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
PTPRA-203ENST00000356147 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
PTPRA-203ENST00000356147 R4GN34 69 aa4.83□□□□□ -1.64
PTPRA-203ENST00000356147 MUC2Q02817 5179 aa4.72□□□□□ -1.65
PTPRA-203ENST00000356147 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
PTPRA-203ENST00000356147 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
PTPRA-203ENST00000356147 KRTAP4-1Q9BYQ7 146 aa4.67□□□□□ -1.66
PTPRA-203ENST00000356147 MUC17Q685J3 4493 aa4.66□□□□□ -1.66
PTPRA-203ENST00000356147 BIRC6Q9NR09 4857 aa4.64□□□□□ -1.67
PTPRA-203ENST00000356147 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
PTPRA-203ENST00000356147 PCLOQ9Y6V0 5065 aa4.58□□□□□ -1.68
PTPRA-203ENST00000356147 HERC2O95714 4834 aa4.56□□□□□ -1.68
PTPRA-203ENST00000356147 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
PTPRA-203ENST00000356147 KRTAP19-2Q3LHN2 52 aa4.48□□□□□ -1.69
PTPRA-203ENST00000356147 HERC1Q15751 4861 aa4.46□□□□□ -1.7
PTPRA-203ENST00000356147 FAT4Q6V0I7 4981 aa4.46□□□□□ -1.7
PTPRA-203ENST00000356147 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
PTPRA-203ENST00000356147 TNP1P09430 55 aa4.4□□□□□ -1.71
PTPRA-203ENST00000356147 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
PTPRA-203ENST00000356147 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
PTPRA-203ENST00000356147 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
PTPRA-203ENST00000356147 M0R2T5 61 aa4.23□□□□□ -1.73
PTPRA-203ENST00000356147 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
PTPRA-203ENST00000356147 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
PTPRA-203ENST00000356147 UBR4Q5T4S7 5183 aa4.21□□□□□ -1.73
PTPRA-203ENST00000356147 HMCN2Q8NDA2 5059 aa4.21□□□□□ -1.74
PTPRA-203ENST00000356147 KRTAP19-1Q8IUB9 90 aa4.2□□□□□ -1.74
PTPRA-203ENST00000356147 LCE2CQ5TA81 110 aa4.18□□□□□ -1.74
PTPRA-203ENST00000356147 SPRR2GQ9BYE4 73 aa4.14□□□□□ -1.75
PTPRA-203ENST00000356147 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
PTPRA-203ENST00000356147 MT1FP04733 61 aa4.09□□□□□ -1.75
PTPRA-203ENST00000356147 MT1HP80294 61 aa4.06□□□□□ -1.76
PTPRA-203ENST00000356147 MT2AP02795 61 aa4.05□□□□□ -1.76
PTPRA-203ENST00000356147 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
PTPRA-203ENST00000356147 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
PTPRA-203ENST00000356147 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
PTPRA-203ENST00000356147 MT1XP80297 61 aa3.97□□□□□ -1.77
PTPRA-203ENST00000356147 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
PTPRA-203ENST00000356147 KMT2DO14686 5537 aa3.96□□□□□ -1.78
PTPRA-203ENST00000356147 MT1BP07438 61 aa3.96□□□□□ -1.78
PTPRA-203ENST00000356147 KRTAP10-7P60409 375 aaPredicted RBP3.95□□□□□ -1.78
PTPRA-203ENST00000356147 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
PTPRA-203ENST00000356147 USH2AO75445 5202 aa3.94□□□□□ -1.78
PTPRA-203ENST00000356147 PRO2289Q9P1D8 64 aa3.91□□□□□ -1.78
PTPRA-203ENST00000356147 KRTAP19-8Q3LI54 63 aa3.9□□□□□ -1.78
PTPRA-203ENST00000356147 LCE2DQ5TA82 110 aaPredicted RBP3.83□□□□□ -1.8
PTPRA-203ENST00000356147 INE1O15225 51 aa3.81□□□□□ -1.8
PTPRA-203ENST00000356147 LCE2AQ5TA79 106 aaPredicted RBP3.8□□□□□ -1.8
PTPRA-203ENST00000356147 KRTAP9-3Q9BYQ3 159 aa3.79□□□□□ -1.8
PTPRA-203ENST00000356147 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
PTPRA-203ENST00000356147 KRTAP4-8A0A0G2JLE6 195 aa3.75□□□□□ -1.81
PTPRA-203ENST00000356147 KRTAP4-8Q9BYQ9 185 aa3.75□□□□□ -1.81
PTPRA-203ENST00000356147 LCE3CQ5T5A8 94 aa3.71□□□□□ -1.82
PTPRA-203ENST00000356147 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
PTPRA-203ENST00000356147 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
PTPRA-203ENST00000356147 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
PTPRA-203ENST00000356147 LCE2BO14633 110 aa3.69□□□□□ -1.82
PTPRA-203ENST00000356147 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
PTPRA-203ENST00000356147 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
PTPRA-203ENST00000356147 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
PTPRA-203ENST00000356147 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
PTPRA-203ENST00000356147 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
PTPRA-203ENST00000356147 MT1LQ93083 61 aa3.43□□□□□ -1.86
PTPRA-203ENST00000356147 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
PTPRA-203ENST00000356147 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms