RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SMR3BP02814 79 aaPredicted RBP9.82□□□□□ -0.84
PRPF39-201ENST00000355765 NDUFAF8A1L188 74 aa9.77□□□□□ -0.85
PRPF39-201ENST00000355765 RYR2Q92736 4967 aa9.75□□□□□ -0.85
PRPF39-201ENST00000355765 KRTAP3-3Q9BYR6 98 aa9.75□□□□□ -0.85
PRPF39-201ENST00000355765 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
PRPF39-201ENST00000355765 FAT1Q14517 4588 aa9.72□□□□□ -0.85
PRPF39-201ENST00000355765 DYNC1H1Q14204 4646 aaKnown RBP9.71□□□□□ -0.85
PRPF39-201ENST00000355765 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
PRPF39-201ENST00000355765 A0A1B0GVY2 172 aa9.69□□□□□ -0.86
PRPF39-201ENST00000355765 KRTAP15-1Q3LI76 137 aa9.68□□□□□ -0.86
PRPF39-201ENST00000355765 S4R3F8 94 aa9.63□□□□□ -0.87
PRPF39-201ENST00000355765 KRTAP12-2P59991 146 aa9.62□□□□□ -0.87
PRPF39-201ENST00000355765 APOBP04114 4563 aaKnown RBP9.57□□□□□ -0.88
PRPF39-201ENST00000355765 RYR3Q15413 4870 aa9.57□□□□□ -0.88
PRPF39-201ENST00000355765 KRTAP10-8P60410 259 aa9.57□□□□□ -0.88
PRPF39-201ENST00000355765 HSPG2P98160 4391 aa9.52□□□□□ -0.89
PRPF39-201ENST00000355765 KRTAP12-1P59990 96 aa9.46□□□□□ -0.9
PRPF39-201ENST00000355765 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
PRPF39-201ENST00000355765 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
PRPF39-201ENST00000355765 MYCBP2O75592 4640 aa9.43□□□□□ -0.9
PRPF39-201ENST00000355765 LRP1Q07954 4544 aaKnown RBP9.4□□□□□ -0.9
PRPF39-201ENST00000355765 XP32Q5T750 250 aa9.36□□□□□ -0.91
PRPF39-201ENST00000355765 KIAA1109Q2LD37 5005 aa9.29□□□□□ -0.92
PRPF39-201ENST00000355765 Q5VSD8 79 aa9.28□□□□□ -0.92
PRPF39-201ENST00000355765 KRTAP17-1Q9BYP8 105 aa9.26□□□□□ -0.93
PRPF39-201ENST00000355765 TNXBP22105 4242 aa9.25□□□□□ -0.93
PRPF39-201ENST00000355765 EPPK1P58107 5090 aaKnown RBP9.25□□□□□ -0.93
PRPF39-201ENST00000355765 RYR1P21817 5038 aa9.23□□□□□ -0.93
PRPF39-201ENST00000355765 LPAP08519 4548 aa9.19□□□□□ -0.94
PRPF39-201ENST00000355765 M0QZ58 72 aa9.15□□□□□ -0.94
PRPF39-201ENST00000355765 PLAC4Q8WY50 150 aa9.03□□□□□ -0.96
PRPF39-201ENST00000355765 A0A0A0MQY5 61 aa8.99□□□□□ -0.97
PRPF39-201ENST00000355765 LRP2P98164 4655 aa8.98□□□□□ -0.97
PRPF39-201ENST00000355765 R4GN34 69 aa8.96□□□□□ -0.98
PRPF39-201ENST00000355765 KRTAP4-5Q9BYR2 181 aa8.95□□□□□ -0.98
PRPF39-201ENST00000355765 MT1HL1P0DM35 61 aa8.92□□□□□ -0.98
PRPF39-201ENST00000355765 LUZP6Q538Z0 58 aa8.92□□□□□ -0.98
PRPF39-201ENST00000355765 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
PRPF39-201ENST00000355765 ABCA13Q86UQ4 5058 aa8.78□□□□□ -1
PRPF39-201ENST00000355765 HERC2O95714 4834 aa8.67□□□□□ -1.02
PRPF39-201ENST00000355765 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
PRPF39-201ENST00000355765 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
PRPF39-201ENST00000355765 J3QL48 77 aa8.59□□□□□ -1.03
PRPF39-201ENST00000355765 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
PRPF39-201ENST00000355765 MUC17Q685J3 4493 aa8.46□□□□□ -1.06
PRPF39-201ENST00000355765 PCLOQ9Y6V0 5065 aa8.44□□□□□ -1.06
PRPF39-201ENST00000355765 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
PRPF39-201ENST00000355765 HERC1Q15751 4861 aa8.35□□□□□ -1.07
PRPF39-201ENST00000355765 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
PRPF39-201ENST00000355765 TNP1P09430 55 aa8.26□□□□□ -1.09
PRPF39-201ENST00000355765 MUC2Q02817 5179 aa8.22□□□□□ -1.09
PRPF39-201ENST00000355765 SPRR5A0A1B0GTR4 108 aa8.2□□□□□ -1.1
PRPF39-201ENST00000355765 KRTAP19-2Q3LHN2 52 aa8.18□□□□□ -1.1
PRPF39-201ENST00000355765 HMCN2Q8NDA2 5059 aa8.11□□□□□ -1.11
PRPF39-201ENST00000355765 KRTAP23-1A1A580 65 aa8.04□□□□□ -1.12
PRPF39-201ENST00000355765 FLGP20930 4061 aaPredicted RBP8□□□□□ -1.13
PRPF39-201ENST00000355765 UBR4Q5T4S7 5183 aa7.91□□□□□ -1.14
PRPF39-201ENST00000355765 RNF213Q63HN8 5207 aa7.9□□□□□ -1.15
PRPF39-201ENST00000355765 LCE3AQ5TA76 89 aa7.85□□□□□ -1.15
PRPF39-201ENST00000355765 FAT4Q6V0I7 4981 aa7.84□□□□□ -1.16
PRPF39-201ENST00000355765 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
PRPF39-201ENST00000355765 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
PRPF39-201ENST00000355765 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
PRPF39-201ENST00000355765 SPRR2GQ9BYE4 73 aa7.65□□□□□ -1.19
PRPF39-201ENST00000355765 INE1O15225 51 aa7.61□□□□□ -1.19
PRPF39-201ENST00000355765 M0R2T5 61 aa7.56□□□□□ -1.2
PRPF39-201ENST00000355765 MT1HP80294 61 aa7.51□□□□□ -1.21
PRPF39-201ENST00000355765 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
PRPF39-201ENST00000355765 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
PRPF39-201ENST00000355765 KRTAP10-10P60014 251 aa7.39□□□□□ -1.23
PRPF39-201ENST00000355765 MT1FP04733 61 aa7.36□□□□□ -1.23
PRPF39-201ENST00000355765 KRTAP10-12P60413 245 aa7.31□□□□□ -1.24
PRPF39-201ENST00000355765 MT2AP02795 61 aa7.3□□□□□ -1.24
PRPF39-201ENST00000355765 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
PRPF39-201ENST00000355765 MT1XP80297 61 aa7.27□□□□□ -1.25
PRPF39-201ENST00000355765 KRTAP9-8Q9BYQ0 159 aa7.26□□□□□ -1.25
PRPF39-201ENST00000355765 MT1BP07438 61 aa7.19□□□□□ -1.26
PRPF39-201ENST00000355765 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
PRPF39-201ENST00000355765 KRTAP19-8Q3LI54 63 aa7.19□□□□□ -1.26
PRPF39-201ENST00000355765 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
PRPF39-201ENST00000355765 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.29
PRPF39-201ENST00000355765 KRTAP9-3Q9BYQ3 159 aa6.96□□□□□ -1.29
PRPF39-201ENST00000355765 KRTAP19-5Q3LI72 72 aa6.96□□□□□ -1.3
PRPF39-201ENST00000355765 KMT2DO14686 5537 aa6.9□□□□□ -1.3
PRPF39-201ENST00000355765 KRTAP9-6A8MVA2 160 aa6.87□□□□□ -1.31
PRPF39-201ENST00000355765 USH2AO75445 5202 aa6.85□□□□□ -1.31
PRPF39-201ENST00000355765 LCE2BO14633 110 aa6.8□□□□□ -1.32
PRPF39-201ENST00000355765 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
PRPF39-201ENST00000355765 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
PRPF39-201ENST00000355765 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
PRPF39-201ENST00000355765 KRTAP2-3P0C7H8 128 aa6.66□□□□□ -1.34
PRPF39-201ENST00000355765 KRTAP2-4Q9BYR9 128 aa6.66□□□□□ -1.34
PRPF39-201ENST00000355765 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
PRPF39-201ENST00000355765 FSIP2Q5CZC0 6907 aa6.62□□□□□ -1.35
PRPF39-201ENST00000355765 KRTAP19-7Q3SYF9 63 aa6.47□□□□□ -1.37
PRPF39-201ENST00000355765 SSPOA2VEC9 5147 aa6.41□□□□□ -1.38
PRPF39-201ENST00000355765 MT1LQ93083 61 aa6.32□□□□□ -1.4
PRPF39-201ENST00000355765 MT1EP04732 61 aa6.23□□□□□ -1.41
PRPF39-201ENST00000355765 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
PRPF39-201ENST00000355765 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms