RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 KRTAP3-1Q9BYR8 98 aa7.39□□□□□ -1.23
EBF3-201ENST00000355311 KRTAP17-1Q9BYP8 105 aa7.36□□□□□ -1.23
EBF3-201ENST00000355311 A0A1B0GU33 70 aa7.32□□□□□ -1.24
EBF3-201ENST00000355311 P0C880 135 aa7.31□□□□□ -1.24
EBF3-201ENST00000355311 RYR1P21817 5038 aa7.3□□□□□ -1.24
EBF3-201ENST00000355311 Q5VSD8 79 aa7.3□□□□□ -1.24
EBF3-201ENST00000355311 LRP2P98164 4655 aa7.3□□□□□ -1.24
EBF3-201ENST00000355311 TNXBP22105 4242 aa7.29□□□□□ -1.24
EBF3-201ENST00000355311 C20orf166-AS1Q96NR2 134 aa7.27□□□□□ -1.25
EBF3-201ENST00000355311 EPPK1P58107 5090 aaKnown RBP7.26□□□□□ -1.25
EBF3-201ENST00000355311 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
EBF3-201ENST00000355311 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
EBF3-201ENST00000355311 ABCA13Q86UQ4 5058 aa7.22□□□□□ -1.25
EBF3-201ENST00000355311 A0A0D9SG42 100 aa7.19□□□□□ -1.26
EBF3-201ENST00000355311 RPS29P62273 56 aaKnown RBP7.18□□□□□ -1.26
EBF3-201ENST00000355311 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
EBF3-201ENST00000355311 COX6B2Q6YFQ2 88 aa7.16□□□□□ -1.26
EBF3-201ENST00000355311 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
EBF3-201ENST00000355311 XP32Q5T750 250 aa7.11□□□□□ -1.27
EBF3-201ENST00000355311 K7ERS5 55 aa7.09□□□□□ -1.27
EBF3-201ENST00000355311 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
EBF3-201ENST00000355311 MUC2Q02817 5179 aa7.08□□□□□ -1.28
EBF3-201ENST00000355311 NDUFAF8A1L188 74 aa7.06□□□□□ -1.28
EBF3-201ENST00000355311 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
EBF3-201ENST00000355311 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
EBF3-201ENST00000355311 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
EBF3-201ENST00000355311 RPL37P61927 97 aaKnown RBP7.01□□□□□ -1.29
EBF3-201ENST00000355311 MT1HL1P0DM35 61 aa6.99□□□□□ -1.29
EBF3-201ENST00000355311 S4R3F8 94 aa6.96□□□□□ -1.3
EBF3-201ENST00000355311 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
EBF3-201ENST00000355311 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
EBF3-201ENST00000355311 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
EBF3-201ENST00000355311 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
EBF3-201ENST00000355311 HERC2O95714 4834 aa6.82□□□□□ -1.32
EBF3-201ENST00000355311 HERC1Q15751 4861 aa6.73□□□□□ -1.33
EBF3-201ENST00000355311 J3QL48 77 aa6.7□□□□□ -1.34
EBF3-201ENST00000355311 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
EBF3-201ENST00000355311 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
EBF3-201ENST00000355311 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
EBF3-201ENST00000355311 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
EBF3-201ENST00000355311 M0QZ58 72 aa6.63□□□□□ -1.35
EBF3-201ENST00000355311 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
EBF3-201ENST00000355311 MUC17Q685J3 4493 aa6.6□□□□□ -1.35
EBF3-201ENST00000355311 R4GN34 69 aa6.57□□□□□ -1.36
EBF3-201ENST00000355311 A0A0A0MQY5 61 aa6.54□□□□□ -1.36
EBF3-201ENST00000355311 PCLOQ9Y6V0 5065 aa6.54□□□□□ -1.36
EBF3-201ENST00000355311 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
EBF3-201ENST00000355311 SEC61BP60468 96 aaKnown RBP6.47□□□□□ -1.37
EBF3-201ENST00000355311 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
EBF3-201ENST00000355311 LUZP6Q538Z0 58 aa6.4□□□□□ -1.38
EBF3-201ENST00000355311 PLAC4Q8WY50 150 aa6.4□□□□□ -1.38
EBF3-201ENST00000355311 CAMK2N1Q7Z7J9 78 aa6.3□□□□□ -1.4
EBF3-201ENST00000355311 HMCN2Q8NDA2 5059 aa6.29□□□□□ -1.4
EBF3-201ENST00000355311 KRTAP19-2Q3LHN2 52 aa6.27□□□□□ -1.41
EBF3-201ENST00000355311 FLGP20930 4061 aaPredicted RBP6.24□□□□□ -1.41
EBF3-201ENST00000355311 M0R2T5 61 aa6.19□□□□□ -1.42
EBF3-201ENST00000355311 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
EBF3-201ENST00000355311 USH2AO75445 5202 aa5.96□□□□□ -1.46
EBF3-201ENST00000355311 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
EBF3-201ENST00000355311 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
EBF3-201ENST00000355311 MT1HP80294 61 aa5.87□□□□□ -1.47
EBF3-201ENST00000355311 TNP1P09430 55 aa5.87□□□□□ -1.47
EBF3-201ENST00000355311 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
EBF3-201ENST00000355311 MT1FP04733 61 aa5.84□□□□□ -1.47
EBF3-201ENST00000355311 KMT2DO14686 5537 aa5.82□□□□□ -1.48
EBF3-201ENST00000355311 MT2AP02795 61 aa5.77□□□□□ -1.49
EBF3-201ENST00000355311 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
EBF3-201ENST00000355311 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
EBF3-201ENST00000355311 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
EBF3-201ENST00000355311 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
EBF3-201ENST00000355311 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
EBF3-201ENST00000355311 MT1BP07438 61 aa5.54□□□□□ -1.52
EBF3-201ENST00000355311 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
EBF3-201ENST00000355311 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
EBF3-201ENST00000355311 MT1XP80297 61 aa5.5□□□□□ -1.53
EBF3-201ENST00000355311 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
EBF3-201ENST00000355311 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
EBF3-201ENST00000355311 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
EBF3-201ENST00000355311 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
EBF3-201ENST00000355311 KRTAP19-8Q3LI54 63 aa5.4□□□□□ -1.55
EBF3-201ENST00000355311 KRTAP10-12P60413 245 aa5.39□□□□□ -1.55
EBF3-201ENST00000355311 LCE2BO14633 110 aa5.37□□□□□ -1.55
EBF3-201ENST00000355311 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
EBF3-201ENST00000355311 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
EBF3-201ENST00000355311 KRTAP4-8A0A0G2JLE6 195 aa5.34□□□□□ -1.55
EBF3-201ENST00000355311 KRTAP4-8Q9BYQ9 185 aa5.34□□□□□ -1.55
EBF3-201ENST00000355311 KRTAP8-1Q8IUC2 63 aa5.28□□□□□ -1.56
EBF3-201ENST00000355311 INE1O15225 51 aa5.26□□□□□ -1.57
EBF3-201ENST00000355311 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
EBF3-201ENST00000355311 DSTQ03001 7570 aaKnown RBP5.19□□□□□ -1.58
EBF3-201ENST00000355311 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
EBF3-201ENST00000355311 SSPOA2VEC9 5147 aa5.15□□□□□ -1.58
EBF3-201ENST00000355311 MUC12Q9UKN1 5478 aa5.1□□□□□ -1.59
EBF3-201ENST00000355311 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
EBF3-201ENST00000355311 LCE3CQ5T5A8 94 aa4.97□□□□□ -1.61
EBF3-201ENST00000355311 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
EBF3-201ENST00000355311 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.63
EBF3-201ENST00000355311 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
EBF3-201ENST00000355311 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
EBF3-201ENST00000355311 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms