RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
COL13A1-201ENST00000354547 Q5VSD8 79 aa10.26□□□□□ -0.77
COL13A1-201ENST00000354547 TNXBP22105 4242 aa10.25□□□□□ -0.77
COL13A1-201ENST00000354547 H1FX-AS1Q4G0G2 97 aa10.21□□□□□ -0.77
COL13A1-201ENST00000354547 KRTAP10-8P60410 259 aa10.19□□□□□ -0.78
COL13A1-201ENST00000354547 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
COL13A1-201ENST00000354547 CSAG1Q6PB30 78 aa10.18□□□□□ -0.78
COL13A1-201ENST00000354547 KRTAP17-1Q9BYP8 105 aa10.11□□□□□ -0.79
COL13A1-201ENST00000354547 XP32Q5T750 250 aa10.1□□□□□ -0.79
COL13A1-201ENST00000354547 RYR3Q15413 4870 aa10.1□□□□□ -0.79
COL13A1-201ENST00000354547 RPL37P61927 97 aaKnown RBP10.09□□□□□ -0.79
COL13A1-201ENST00000354547 KIAA1109Q2LD37 5005 aa10.06□□□□□ -0.8
COL13A1-201ENST00000354547 LINC01554Q52M75 96 aa10.04□□□□□ -0.8
COL13A1-201ENST00000354547 RYR1P21817 5038 aa10.02□□□□□ -0.81
COL13A1-201ENST00000354547 A0A0D9SG42 100 aa9.98□□□□□ -0.81
COL13A1-201ENST00000354547 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
COL13A1-201ENST00000354547 S4R3F8 94 aa9.96□□□□□ -0.81
COL13A1-201ENST00000354547 LPAP08519 4548 aa9.94□□□□□ -0.82
COL13A1-201ENST00000354547 KRTAP10-6P60371 365 aaPredicted RBP9.94□□□□□ -0.82
COL13A1-201ENST00000354547 K7ERS5 55 aa9.93□□□□□ -0.82
COL13A1-201ENST00000354547 KRTAP13-4Q3LI77 160 aa9.91□□□□□ -0.82
COL13A1-201ENST00000354547 MT1HL1P0DM35 61 aa9.9□□□□□ -0.82
COL13A1-201ENST00000354547 LRP2P98164 4655 aa9.88□□□□□ -0.83
COL13A1-201ENST00000354547 P0C880 135 aa9.85□□□□□ -0.83
COL13A1-201ENST00000354547 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
COL13A1-201ENST00000354547 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
COL13A1-201ENST00000354547 ABCA13Q86UQ4 5058 aa9.7□□□□□ -0.86
COL13A1-201ENST00000354547 ROMO1P60602 79 aa9.69□□□□□ -0.86
COL13A1-201ENST00000354547 KRTAP4-5Q9BYR2 181 aa9.64□□□□□ -0.87
COL13A1-201ENST00000354547 TPRXLQ17RH7 258 aa9.63□□□□□ -0.87
COL13A1-201ENST00000354547 SPINT4Q6UDR6 99 aa9.61□□□□□ -0.87
COL13A1-201ENST00000354547 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
COL13A1-201ENST00000354547 C10orf95Q9H7T3 257 aa9.53□□□□□ -0.88
COL13A1-201ENST00000354547 KRTAP12-1P59990 96 aa9.47□□□□□ -0.89
COL13A1-201ENST00000354547 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.9
COL13A1-201ENST00000354547 LCE2CQ5TA81 110 aa9.38□□□□□ -0.91
COL13A1-201ENST00000354547 M0QZ58 72 aa9.37□□□□□ -0.91
COL13A1-201ENST00000354547 R4GN34 69 aa9.31□□□□□ -0.92
COL13A1-201ENST00000354547 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
COL13A1-201ENST00000354547 MUC17Q685J3 4493 aa9.28□□□□□ -0.92
COL13A1-201ENST00000354547 LCE2BO14633 110 aa9.26□□□□□ -0.93
COL13A1-201ENST00000354547 LORP23490 312 aaPredicted RBP9.24□□□□□ -0.93
COL13A1-201ENST00000354547 HERC2O95714 4834 aa9.23□□□□□ -0.93
COL13A1-201ENST00000354547 MUC2Q02817 5179 aa9.22□□□□□ -0.93
COL13A1-201ENST00000354547 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.93
COL13A1-201ENST00000354547 KRTAP19-2Q3LHN2 52 aa8.98□□□□□ -0.97
COL13A1-201ENST00000354547 KRTAP15-1Q3LI76 137 aa8.91□□□□□ -0.98
COL13A1-201ENST00000354547 HERC1Q15751 4861 aa8.9□□□□□ -0.98
COL13A1-201ENST00000354547 KRTAP23-1A1A580 65 aa8.88□□□□□ -0.99
COL13A1-201ENST00000354547 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
COL13A1-201ENST00000354547 NDUFAF8A1L188 74 aa8.83□□□□□ -1
COL13A1-201ENST00000354547 FLGP20930 4061 aaPredicted RBP8.81□□□□□ -1
COL13A1-201ENST00000354547 BIRC6Q9NR09 4857 aa8.8□□□□□ -1
COL13A1-201ENST00000354547 PCLOQ9Y6V0 5065 aa8.76□□□□□ -1.01
COL13A1-201ENST00000354547 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
COL13A1-201ENST00000354547 HMCN2Q8NDA2 5059 aa8.65□□□□□ -1.03
COL13A1-201ENST00000354547 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
COL13A1-201ENST00000354547 RNF213Q63HN8 5207 aa8.56□□□□□ -1.04
COL13A1-201ENST00000354547 M0R2T5 61 aa8.52□□□□□ -1.05
COL13A1-201ENST00000354547 PP632Q6XCG6 107 aa8.46□□□□□ -1.05
COL13A1-201ENST00000354547 TNP1P09430 55 aa8.44□□□□□ -1.06
COL13A1-201ENST00000354547 UBR4Q5T4S7 5183 aa8.44□□□□□ -1.06
COL13A1-201ENST00000354547 LUZP6Q538Z0 58 aa8.41□□□□□ -1.06
COL13A1-201ENST00000354547 KRTAP19-1Q8IUB9 90 aa8.32□□□□□ -1.08
COL13A1-201ENST00000354547 MT1HP80294 61 aa8.3□□□□□ -1.08
COL13A1-201ENST00000354547 SPRR2GQ9BYE4 73 aa8.28□□□□□ -1.08
COL13A1-201ENST00000354547 KRTAP10-10P60014 251 aa8.27□□□□□ -1.09
COL13A1-201ENST00000354547 MT1FP04733 61 aa8.21□□□□□ -1.1
COL13A1-201ENST00000354547 MT2AP02795 61 aa8.17□□□□□ -1.1
COL13A1-201ENST00000354547 KRTAP9-8Q9BYQ0 159 aa8.09□□□□□ -1.11
COL13A1-201ENST00000354547 LCE3AQ5TA76 89 aa8.05□□□□□ -1.12
COL13A1-201ENST00000354547 MT1BP07438 61 aa7.88□□□□□ -1.15
COL13A1-201ENST00000354547 KRTAP19-8Q3LI54 63 aa7.87□□□□□ -1.15
COL13A1-201ENST00000354547 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
COL13A1-201ENST00000354547 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
COL13A1-201ENST00000354547 MT1XP80297 61 aa7.83□□□□□ -1.16
COL13A1-201ENST00000354547 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
COL13A1-201ENST00000354547 KRTAP10-12P60413 245 aa7.7□□□□□ -1.18
COL13A1-201ENST00000354547 KRTAP8-1Q8IUC2 63 aa7.7□□□□□ -1.18
COL13A1-201ENST00000354547 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
COL13A1-201ENST00000354547 USH2AO75445 5202 aa7.65□□□□□ -1.18
COL13A1-201ENST00000354547 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
COL13A1-201ENST00000354547 KMT2DO14686 5537 aa7.52□□□□□ -1.21
COL13A1-201ENST00000354547 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
COL13A1-201ENST00000354547 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
COL13A1-201ENST00000354547 KRTAP4-8A0A0G2JLE6 195 aa7.3□□□□□ -1.24
COL13A1-201ENST00000354547 KRTAP4-8Q9BYQ9 185 aa7.3□□□□□ -1.24
COL13A1-201ENST00000354547 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.27
COL13A1-201ENST00000354547 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
COL13A1-201ENST00000354547 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
COL13A1-201ENST00000354547 KRTAP19-7Q3SYF9 63 aa6.97□□□□□ -1.29
COL13A1-201ENST00000354547 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
COL13A1-201ENST00000354547 SSPOA2VEC9 5147 aa6.9□□□□□ -1.3
COL13A1-201ENST00000354547 INE1O15225 51 aa6.88□□□□□ -1.31
COL13A1-201ENST00000354547 MT1LQ93083 61 aa6.76□□□□□ -1.33
COL13A1-201ENST00000354547 MT1EP04732 61 aa6.76□□□□□ -1.33
COL13A1-201ENST00000354547 FCGBPQ9Y6R7 5405 aaPredicted RBP6.64□□□□□ -1.35
COL13A1-201ENST00000354547 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
COL13A1-201ENST00000354547 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
COL13A1-201ENST00000354547 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms