RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 Q5VSD8 79 aa6.28□□□□□ -1.4
DDX4-201ENST00000353507 XP32Q5T750 250 aa6.24□□□□□ -1.41
DDX4-201ENST00000353507 KMT2CQ8NEZ4 4911 aaKnown RBP6.23□□□□□ -1.41
DDX4-201ENST00000353507 HSPG2P98160 4391 aa6.23□□□□□ -1.41
DDX4-201ENST00000353507 S4R3F8 94 aa6.23□□□□□ -1.41
DDX4-201ENST00000353507 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
DDX4-201ENST00000353507 KRTAP3-3Q9BYR6 98 aa6.21□□□□□ -1.42
DDX4-201ENST00000353507 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
DDX4-201ENST00000353507 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
DDX4-201ENST00000353507 A0A0D9SG42 100 aa6.16□□□□□ -1.42
DDX4-201ENST00000353507 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
DDX4-201ENST00000353507 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
DDX4-201ENST00000353507 ROMO1P60602 79 aa6.13□□□□□ -1.43
DDX4-201ENST00000353507 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
DDX4-201ENST00000353507 RYR1P21817 5038 aa6.09□□□□□ -1.43
DDX4-201ENST00000353507 P0C880 135 aa6.08□□□□□ -1.44
DDX4-201ENST00000353507 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
DDX4-201ENST00000353507 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
DDX4-201ENST00000353507 RYR3Q15413 4870 aa6.03□□□□□ -1.44
DDX4-201ENST00000353507 KIAA1109Q2LD37 5005 aa5.99□□□□□ -1.45
DDX4-201ENST00000353507 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
DDX4-201ENST00000353507 KRTAP12-2P59991 146 aa5.96□□□□□ -1.46
DDX4-201ENST00000353507 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
DDX4-201ENST00000353507 LPAP08519 4548 aa5.95□□□□□ -1.46
DDX4-201ENST00000353507 LRP2P98164 4655 aa5.94□□□□□ -1.46
DDX4-201ENST00000353507 M0QZ58 72 aa5.91□□□□□ -1.46
DDX4-201ENST00000353507 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
DDX4-201ENST00000353507 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.46
DDX4-201ENST00000353507 H3BS24 57 aa5.88□□□□□ -1.47
DDX4-201ENST00000353507 BIRC6Q9NR09 4857 aa5.86□□□□□ -1.47
DDX4-201ENST00000353507 EPPK1P58107 5090 aaKnown RBP5.79□□□□□ -1.48
DDX4-201ENST00000353507 SEC61BP60468 96 aaKnown RBP5.79□□□□□ -1.48
DDX4-201ENST00000353507 R4GN34 69 aa5.79□□□□□ -1.48
DDX4-201ENST00000353507 ABCA13Q86UQ4 5058 aa5.77□□□□□ -1.49
DDX4-201ENST00000353507 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
DDX4-201ENST00000353507 HERC2O95714 4834 aa5.73□□□□□ -1.49
DDX4-201ENST00000353507 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
DDX4-201ENST00000353507 J3QL48 77 aa5.67□□□□□ -1.5
DDX4-201ENST00000353507 KRTAP15-1Q3LI76 137 aa5.65□□□□□ -1.5
DDX4-201ENST00000353507 KRTAP4-1Q9BYQ7 146 aa5.65□□□□□ -1.51
DDX4-201ENST00000353507 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
DDX4-201ENST00000353507 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
DDX4-201ENST00000353507 KRTAP19-2Q3LHN2 52 aa5.53□□□□□ -1.52
DDX4-201ENST00000353507 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
DDX4-201ENST00000353507 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
DDX4-201ENST00000353507 FLGP20930 4061 aaPredicted RBP5.43□□□□□ -1.54
DDX4-201ENST00000353507 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
DDX4-201ENST00000353507 PCLOQ9Y6V0 5065 aa5.4□□□□□ -1.54
DDX4-201ENST00000353507 MUC2Q02817 5179 aa5.38□□□□□ -1.55
DDX4-201ENST00000353507 HERC1Q15751 4861 aa5.3□□□□□ -1.56
DDX4-201ENST00000353507 TNP1P09430 55 aa5.3□□□□□ -1.56
DDX4-201ENST00000353507 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
DDX4-201ENST00000353507 HMCN2Q8NDA2 5059 aa5.21□□□□□ -1.57
DDX4-201ENST00000353507 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
DDX4-201ENST00000353507 LCE2CQ5TA81 110 aa5.19□□□□□ -1.58
DDX4-201ENST00000353507 M0R2T5 61 aa5.18□□□□□ -1.58
DDX4-201ENST00000353507 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
DDX4-201ENST00000353507 FAT4Q6V0I7 4981 aa5.15□□□□□ -1.59
DDX4-201ENST00000353507 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
DDX4-201ENST00000353507 MT1HP80294 61 aa5.07□□□□□ -1.6
DDX4-201ENST00000353507 KRTAP10-10P60014 251 aa5.04□□□□□ -1.6
DDX4-201ENST00000353507 MT2AP02795 61 aa5.01□□□□□ -1.61
DDX4-201ENST00000353507 MT1FP04733 61 aa5.01□□□□□ -1.61
DDX4-201ENST00000353507 RNF213Q63HN8 5207 aa5.01□□□□□ -1.61
DDX4-201ENST00000353507 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
DDX4-201ENST00000353507 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
DDX4-201ENST00000353507 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
DDX4-201ENST00000353507 UBR4Q5T4S7 5183 aa4.95□□□□□ -1.62
DDX4-201ENST00000353507 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
DDX4-201ENST00000353507 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
DDX4-201ENST00000353507 MT1BP07438 61 aa4.85□□□□□ -1.63
DDX4-201ENST00000353507 KRTAP8-1Q8IUC2 63 aa4.84□□□□□ -1.63
DDX4-201ENST00000353507 KRTAP10-5P60370 271 aa4.83□□□□□ -1.64
DDX4-201ENST00000353507 MT1XP80297 61 aa4.83□□□□□ -1.64
DDX4-201ENST00000353507 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
DDX4-201ENST00000353507 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
DDX4-201ENST00000353507 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
DDX4-201ENST00000353507 PRO2289Q9P1D8 64 aa4.71□□□□□ -1.66
DDX4-201ENST00000353507 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
DDX4-201ENST00000353507 LCE2AQ5TA79 106 aaPredicted RBP4.69□□□□□ -1.66
DDX4-201ENST00000353507 LCE2BO14633 110 aa4.54□□□□□ -1.68
DDX4-201ENST00000353507 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
DDX4-201ENST00000353507 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
DDX4-201ENST00000353507 INE1O15225 51 aa4.48□□□□□ -1.69
DDX4-201ENST00000353507 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
DDX4-201ENST00000353507 USH2AO75445 5202 aa4.44□□□□□ -1.7
DDX4-201ENST00000353507 KMT2DO14686 5537 aa4.41□□□□□ -1.7
DDX4-201ENST00000353507 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
DDX4-201ENST00000353507 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.71
DDX4-201ENST00000353507 KRTAP9-2Q9BYQ4 174 aa4.35□□□□□ -1.71
DDX4-201ENST00000353507 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
DDX4-201ENST00000353507 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
DDX4-201ENST00000353507 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
DDX4-201ENST00000353507 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
DDX4-201ENST00000353507 MT1LQ93083 61 aa4.19□□□□□ -1.74
DDX4-201ENST00000353507 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
DDX4-201ENST00000353507 MT1EP04732 61 aa4.18□□□□□ -1.74
DDX4-201ENST00000353507 CRCT1Q9UGL9 99 aa4.16□□□□□ -1.74
DDX4-201ENST00000353507 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
DDX4-201ENST00000353507 KRTAP2-3P0C7H8 128 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms