RNA–Protein interactions for RNA: ENST00000350902.9

GRIN1-201, Transcript of glutamate ionotropic receptor NMDA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIN1, Length 4,465 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN1-201ENST00000350902 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
GRIN1-201ENST00000350902 VPS13DQ5THJ4 4388 aa7.73□□□□□ -1.17
GRIN1-201ENST00000350902 FRAS1Q86XX4 4008 aa7.72□□□□□ -1.17
GRIN1-201ENST00000350902 KMT2AQ03164 3969 aa7.72□□□□□ -1.17
GRIN1-201ENST00000350902 LRP1BQ9NZR2 4599 aa7.68□□□□□ -1.18
GRIN1-201ENST00000350902 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
GRIN1-201ENST00000350902 DNAH17Q9UFH2 4485 aa7.63□□□□□ -1.19
GRIN1-201ENST00000350902 DNHD1Q96M86 4753 aa7.62□□□□□ -1.19
GRIN1-201ENST00000350902 KRTAP3-3Q9BYR6 98 aa7.6□□□□□ -1.19
GRIN1-201ENST00000350902 DNAH5Q8TE73 4624 aa7.59□□□□□ -1.19
GRIN1-201ENST00000350902 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
GRIN1-201ENST00000350902 DNAH2Q9P225 4427 aa7.57□□□□□ -1.2
GRIN1-201ENST00000350902 FAT1Q14517 4588 aa7.57□□□□□ -1.2
GRIN1-201ENST00000350902 HECTD4Q9Y4D8 3996 aa7.52□□□□□ -1.21
GRIN1-201ENST00000350902 DYNC2H1Q8NCM8 4307 aaKnown RBP7.52□□□□□ -1.21
GRIN1-201ENST00000350902 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
GRIN1-201ENST00000350902 ALMS1Q8TCU4 4167 aa7.49□□□□□ -1.21
GRIN1-201ENST00000350902 DNAH6Q9C0G6 4158 aa7.48□□□□□ -1.21
GRIN1-201ENST00000350902 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.22
GRIN1-201ENST00000350902 VPS13BQ7Z7G8 4022 aa7.42□□□□□ -1.22
GRIN1-201ENST00000350902 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
GRIN1-201ENST00000350902 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
GRIN1-201ENST00000350902 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
GRIN1-201ENST00000350902 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
GRIN1-201ENST00000350902 DYNC1H1Q14204 4646 aaKnown RBP7.32□□□□□ -1.24
GRIN1-201ENST00000350902 HYDINQ4G0P3 5121 aa7.29□□□□□ -1.24
GRIN1-201ENST00000350902 PKHD1P08F94 4074 aa7.17□□□□□ -1.26
GRIN1-201ENST00000350902 SACSQ9NZJ4 4579 aa7.17□□□□□ -1.26
GRIN1-201ENST00000350902 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.27
GRIN1-201ENST00000350902 KRTAP4-5Q9BYR2 181 aa7.13□□□□□ -1.27
GRIN1-201ENST00000350902 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
GRIN1-201ENST00000350902 APOBP04114 4563 aaKnown RBP7.12□□□□□ -1.27
GRIN1-201ENST00000350902 FAT2Q9NYQ8 4349 aa7.1□□□□□ -1.27
GRIN1-201ENST00000350902 FAT3Q8TDW7 4589 aa7.09□□□□□ -1.28
GRIN1-201ENST00000350902 PKD1P98161 4303 aa7.05□□□□□ -1.28
GRIN1-201ENST00000350902 RYR1P21817 5038 aa6.99□□□□□ -1.29
GRIN1-201ENST00000350902 KIAA1109Q2LD37 5005 aa6.95□□□□□ -1.3
GRIN1-201ENST00000350902 LRP2P98164 4655 aa6.86□□□□□ -1.31
GRIN1-201ENST00000350902 RYR2Q92736 4967 aa6.84□□□□□ -1.31
GRIN1-201ENST00000350902 KMT2CQ8NEZ4 4911 aaKnown RBP6.84□□□□□ -1.31
GRIN1-201ENST00000350902 RYR3Q15413 4870 aa6.8□□□□□ -1.32
GRIN1-201ENST00000350902 KRTAP17-1Q9BYP8 105 aa6.78□□□□□ -1.32
GRIN1-201ENST00000350902 KRTAP4-1Q9BYQ7 146 aa6.78□□□□□ -1.32
GRIN1-201ENST00000350902 HSPG2P98160 4391 aa6.76□□□□□ -1.33
GRIN1-201ENST00000350902 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
GRIN1-201ENST00000350902 PKHD1L1Q86WI1 4243 aa6.64□□□□□ -1.35
GRIN1-201ENST00000350902 KRTAP10-12P60413 245 aa6.57□□□□□ -1.36
GRIN1-201ENST00000350902 LPAP08519 4548 aa6.57□□□□□ -1.36
GRIN1-201ENST00000350902 TNXBP22105 4242 aa6.55□□□□□ -1.36
GRIN1-201ENST00000350902 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
GRIN1-201ENST00000350902 KRTAP12-3P60328 96 aa6.42□□□□□ -1.38
GRIN1-201ENST00000350902 EPPK1P58107 5090 aaKnown RBP6.38□□□□□ -1.39
GRIN1-201ENST00000350902 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
GRIN1-201ENST00000350902 HERC2O95714 4834 aa6.32□□□□□ -1.4
GRIN1-201ENST00000350902 ABCA13Q86UQ4 5058 aa6.27□□□□□ -1.41
GRIN1-201ENST00000350902 MT1HP80294 61 aa6.27□□□□□ -1.41
GRIN1-201ENST00000350902 MT2AP02795 61 aa6.21□□□□□ -1.42
GRIN1-201ENST00000350902 INE1O15225 51 aa6.2□□□□□ -1.42
GRIN1-201ENST00000350902 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
GRIN1-201ENST00000350902 MUC2Q02817 5179 aa6.17□□□□□ -1.42
GRIN1-201ENST00000350902 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
GRIN1-201ENST00000350902 MT1FP04733 61 aa6.12□□□□□ -1.43
GRIN1-201ENST00000350902 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
GRIN1-201ENST00000350902 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
GRIN1-201ENST00000350902 SYNE1Q8NF91 8797 aaKnown RBP6.05□□□□□ -1.44
GRIN1-201ENST00000350902 KRTAP19-2Q3LHN2 52 aa6.04□□□□□ -1.44
GRIN1-201ENST00000350902 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
GRIN1-201ENST00000350902 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
GRIN1-201ENST00000350902 FAT4Q6V0I7 4981 aa5.95□□□□□ -1.46
GRIN1-201ENST00000350902 BIRC6Q9NR09 4857 aa5.95□□□□□ -1.46
GRIN1-201ENST00000350902 PCLOQ9Y6V0 5065 aa5.94□□□□□ -1.46
GRIN1-201ENST00000350902 HERC1Q15751 4861 aa5.91□□□□□ -1.46
GRIN1-201ENST00000350902 FLGP20930 4061 aaPredicted RBP5.91□□□□□ -1.46
GRIN1-201ENST00000350902 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
GRIN1-201ENST00000350902 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
GRIN1-201ENST00000350902 RNF213Q63HN8 5207 aa5.83□□□□□ -1.48
GRIN1-201ENST00000350902 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
GRIN1-201ENST00000350902 MT1XP80297 61 aa5.82□□□□□ -1.48
GRIN1-201ENST00000350902 SPRR2FQ96RM1 72 aa5.82□□□□□ -1.48
GRIN1-201ENST00000350902 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
GRIN1-201ENST00000350902 MT1BP07438 61 aa5.78□□□□□ -1.48
GRIN1-201ENST00000350902 KRTAP19-8Q3LI54 63 aa5.78□□□□□ -1.48
GRIN1-201ENST00000350902 KRTAP9-8Q9BYQ0 159 aa5.77□□□□□ -1.49
GRIN1-201ENST00000350902 UBR4Q5T4S7 5183 aa5.74□□□□□ -1.49
GRIN1-201ENST00000350902 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
GRIN1-201ENST00000350902 HMCN2Q8NDA2 5059 aa5.68□□□□□ -1.5
GRIN1-201ENST00000350902 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
GRIN1-201ENST00000350902 KRTAP4-8A0A0G2JLE6 195 aa5.62□□□□□ -1.51
GRIN1-201ENST00000350902 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
GRIN1-201ENST00000350902 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
GRIN1-201ENST00000350902 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
GRIN1-201ENST00000350902 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
GRIN1-201ENST00000350902 LCE2BO14633 110 aa5.36□□□□□ -1.55
GRIN1-201ENST00000350902 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
GRIN1-201ENST00000350902 SPRR2EP22531 72 aa5.33□□□□□ -1.56
GRIN1-201ENST00000350902 SPRR2BP35325 72 aa5.33□□□□□ -1.56
GRIN1-201ENST00000350902 SPRR2AP35326 72 aa5.33□□□□□ -1.56
GRIN1-201ENST00000350902 MT1GP13640 62 aa5.31□□□□□ -1.56
GRIN1-201ENST00000350902 KMT2DO14686 5537 aa5.3□□□□□ -1.56
GRIN1-201ENST00000350902 USH2AO75445 5202 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms