RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
APP-202ENST00000348990 NDUFAF8A1L188 74 aa9.11□□□□□ -0.95
APP-202ENST00000348990 SACSQ9NZJ4 4579 aa9.1□□□□□ -0.95
APP-202ENST00000348990 KRTAP10-8P60410 259 aa9.08□□□□□ -0.96
APP-202ENST00000348990 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
APP-202ENST00000348990 DYNC1H1Q14204 4646 aaKnown RBP9.06□□□□□ -0.96
APP-202ENST00000348990 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
APP-202ENST00000348990 KRTAP12-2P59991 146 aa9.01□□□□□ -0.97
APP-202ENST00000348990 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
APP-202ENST00000348990 XP32Q5T750 250 aa8.95□□□□□ -0.98
APP-202ENST00000348990 LRP1Q07954 4544 aaKnown RBP8.89□□□□□ -0.99
APP-202ENST00000348990 A0A1B0GVY2 172 aa8.89□□□□□ -0.99
APP-202ENST00000348990 KRTAP12-1P59990 96 aa8.86□□□□□ -0.99
APP-202ENST00000348990 PKHD1L1Q86WI1 4243 aa8.83□□□□□ -1
APP-202ENST00000348990 HSPG2P98160 4391 aa8.82□□□□□ -1
APP-202ENST00000348990 Q5VSD8 79 aa8.82□□□□□ -1
APP-202ENST00000348990 KRTAP15-1Q3LI76 137 aa8.81□□□□□ -1
APP-202ENST00000348990 APOBP04114 4563 aaKnown RBP8.81□□□□□ -1
APP-202ENST00000348990 A0A0A0MQY5 61 aa8.75□□□□□ -1.01
APP-202ENST00000348990 FAT3Q8TDW7 4589 aa8.75□□□□□ -1.01
APP-202ENST00000348990 M0QZ58 72 aa8.73□□□□□ -1.01
APP-202ENST00000348990 R4GN34 69 aa8.68□□□□□ -1.02
APP-202ENST00000348990 TNXBP22105 4242 aa8.55□□□□□ -1.04
APP-202ENST00000348990 LUZP6Q538Z0 58 aa8.53□□□□□ -1.04
APP-202ENST00000348990 LPAP08519 4548 aa8.51□□□□□ -1.05
APP-202ENST00000348990 KMT2CQ8NEZ4 4911 aaKnown RBP8.51□□□□□ -1.05
APP-202ENST00000348990 LRP2P98164 4655 aa8.5□□□□□ -1.05
APP-202ENST00000348990 PLAC4Q8WY50 150 aa8.47□□□□□ -1.05
APP-202ENST00000348990 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
APP-202ENST00000348990 RYR2Q92736 4967 aa8.41□□□□□ -1.06
APP-202ENST00000348990 CAMK2N1Q7Z7J9 78 aa8.38□□□□□ -1.07
APP-202ENST00000348990 KRTAP17-1Q9BYP8 105 aa8.38□□□□□ -1.07
APP-202ENST00000348990 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
APP-202ENST00000348990 KIAA1109Q2LD37 5005 aa8.34□□□□□ -1.07
APP-202ENST00000348990 RYR1P21817 5038 aa8.26□□□□□ -1.09
APP-202ENST00000348990 RYR3Q15413 4870 aa8.22□□□□□ -1.09
APP-202ENST00000348990 SEC61BP60468 96 aaKnown RBP8.21□□□□□ -1.1
APP-202ENST00000348990 KRTAP21-3Q3LHN1 58 aa8.19□□□□□ -1.1
APP-202ENST00000348990 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
APP-202ENST00000348990 ABCA13Q86UQ4 5058 aa8.06□□□□□ -1.12
APP-202ENST00000348990 J3QL48 77 aa8.02□□□□□ -1.12
APP-202ENST00000348990 KRTAP4-1Q9BYQ7 146 aa8.02□□□□□ -1.13
APP-202ENST00000348990 KRTAP4-5Q9BYR2 181 aa8□□□□□ -1.13
APP-202ENST00000348990 TNP1P09430 55 aa7.94□□□□□ -1.14
APP-202ENST00000348990 MUC2Q02817 5179 aa7.81□□□□□ -1.16
APP-202ENST00000348990 EPPK1P58107 5090 aaKnown RBP7.79□□□□□ -1.16
APP-202ENST00000348990 MUC17Q685J3 4493 aa7.78□□□□□ -1.16
APP-202ENST00000348990 KRTAP19-2Q3LHN2 52 aa7.66□□□□□ -1.18
APP-202ENST00000348990 M0R2T5 61 aa7.59□□□□□ -1.2
APP-202ENST00000348990 HERC2O95714 4834 aa7.52□□□□□ -1.21
APP-202ENST00000348990 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
APP-202ENST00000348990 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
APP-202ENST00000348990 SPRR5A0A1B0GTR4 108 aa7.46□□□□□ -1.22
APP-202ENST00000348990 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
APP-202ENST00000348990 FAT4Q6V0I7 4981 aa7.4□□□□□ -1.23
APP-202ENST00000348990 PCLOQ9Y6V0 5065 aa7.39□□□□□ -1.23
APP-202ENST00000348990 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
APP-202ENST00000348990 PRO2289Q9P1D8 64 aa7.3□□□□□ -1.24
APP-202ENST00000348990 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
APP-202ENST00000348990 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
APP-202ENST00000348990 HERC1Q15751 4861 aa7.21□□□□□ -1.26
APP-202ENST00000348990 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
APP-202ENST00000348990 LCE2CQ5TA81 110 aa7.16□□□□□ -1.26
APP-202ENST00000348990 RNF213Q63HN8 5207 aa7.11□□□□□ -1.27
APP-202ENST00000348990 MT1FP04733 61 aa7.09□□□□□ -1.27
APP-202ENST00000348990 INE1O15225 51 aa7.06□□□□□ -1.28
APP-202ENST00000348990 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
APP-202ENST00000348990 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
APP-202ENST00000348990 MT2AP02795 61 aa7.05□□□□□ -1.28
APP-202ENST00000348990 MT1HP80294 61 aa7.04□□□□□ -1.28
APP-202ENST00000348990 HMCN2Q8NDA2 5059 aa7.03□□□□□ -1.28
APP-202ENST00000348990 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
APP-202ENST00000348990 KRTAP10-5P60370 271 aa6.91□□□□□ -1.3
APP-202ENST00000348990 MT1XP80297 61 aa6.89□□□□□ -1.31
APP-202ENST00000348990 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
APP-202ENST00000348990 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
APP-202ENST00000348990 MT1BP07438 61 aa6.85□□□□□ -1.31
APP-202ENST00000348990 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
APP-202ENST00000348990 KRTAP19-8Q3LI54 63 aa6.84□□□□□ -1.31
APP-202ENST00000348990 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
APP-202ENST00000348990 KMT2DO14686 5537 aa6.58□□□□□ -1.36
APP-202ENST00000348990 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
APP-202ENST00000348990 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
APP-202ENST00000348990 USH2AO75445 5202 aa6.51□□□□□ -1.37
APP-202ENST00000348990 KRTAP4-8A0A0G2JLE6 195 aa6.44□□□□□ -1.38
APP-202ENST00000348990 KRTAP4-8Q9BYQ9 185 aa6.44□□□□□ -1.38
APP-202ENST00000348990 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
APP-202ENST00000348990 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
APP-202ENST00000348990 LCE2BO14633 110 aa6.32□□□□□ -1.4
APP-202ENST00000348990 KRTAP19-7Q3SYF9 63 aa6.12□□□□□ -1.43
APP-202ENST00000348990 KRTAP2-3P0C7H8 128 aa6.11□□□□□ -1.43
APP-202ENST00000348990 KRTAP2-4Q9BYR9 128 aa6.11□□□□□ -1.43
APP-202ENST00000348990 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
APP-202ENST00000348990 MT1LQ93083 61 aa6□□□□□ -1.45
APP-202ENST00000348990 CRCT1Q9UGL9 99 aa6□□□□□ -1.45
APP-202ENST00000348990 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
APP-202ENST00000348990 MT1EP04732 61 aa5.93□□□□□ -1.46
APP-202ENST00000348990 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.47
APP-202ENST00000348990 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
APP-202ENST00000348990 MT1GP13640 62 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms