RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RYR3Q15413 4870 aa9.86□□□□□ -0.83
SCARF1-202ENST00000348987 C20orf166-AS1Q96NR2 134 aa9.83□□□□□ -0.84
SCARF1-202ENST00000348987 SPINT4Q6UDR6 99 aa9.8□□□□□ -0.84
SCARF1-202ENST00000348987 TPRXLQ17RH7 258 aa9.78□□□□□ -0.84
SCARF1-202ENST00000348987 RPL37P61927 97 aaKnown RBP9.77□□□□□ -0.85
SCARF1-202ENST00000348987 A0A0D9SG42 100 aa9.75□□□□□ -0.85
SCARF1-202ENST00000348987 KRTAP13-4Q3LI77 160 aa9.72□□□□□ -0.85
SCARF1-202ENST00000348987 HSPG2P98160 4391 aa9.72□□□□□ -0.85
SCARF1-202ENST00000348987 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.85
SCARF1-202ENST00000348987 C10orf95Q9H7T3 257 aa9.71□□□□□ -0.86
SCARF1-202ENST00000348987 MYCBP2O75592 4640 aa9.7□□□□□ -0.86
SCARF1-202ENST00000348987 KRTAP10-6P60371 365 aaPredicted RBP9.69□□□□□ -0.86
SCARF1-202ENST00000348987 FAT3Q8TDW7 4589 aa9.68□□□□□ -0.86
SCARF1-202ENST00000348987 KIAA1109Q2LD37 5005 aa9.67□□□□□ -0.86
SCARF1-202ENST00000348987 KRTAP17-1Q9BYP8 105 aa9.66□□□□□ -0.86
SCARF1-202ENST00000348987 TNXBP22105 4242 aa9.66□□□□□ -0.86
SCARF1-202ENST00000348987 NDUFAF8A1L188 74 aa9.63□□□□□ -0.87
SCARF1-202ENST00000348987 RYR1P21817 5038 aa9.59□□□□□ -0.87
SCARF1-202ENST00000348987 KRTAP15-1Q3LI76 137 aa9.58□□□□□ -0.88
SCARF1-202ENST00000348987 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
SCARF1-202ENST00000348987 Q5VSD8 79 aa9.58□□□□□ -0.88
SCARF1-202ENST00000348987 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
SCARF1-202ENST00000348987 EPPK1P58107 5090 aaKnown RBP9.53□□□□□ -0.88
SCARF1-202ENST00000348987 S4R3F8 94 aa9.47□□□□□ -0.89
SCARF1-202ENST00000348987 KRTAP10-8P60410 259 aa9.46□□□□□ -0.9
SCARF1-202ENST00000348987 KRTAP12-2P59991 146 aa9.45□□□□□ -0.9
SCARF1-202ENST00000348987 LPAP08519 4548 aa9.37□□□□□ -0.91
SCARF1-202ENST00000348987 XP32Q5T750 250 aa9.35□□□□□ -0.91
SCARF1-202ENST00000348987 KRTAP12-1P59990 96 aa9.31□□□□□ -0.92
SCARF1-202ENST00000348987 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
SCARF1-202ENST00000348987 MT1HL1P0DM35 61 aa9.28□□□□□ -0.92
SCARF1-202ENST00000348987 LRP2P98164 4655 aa9.27□□□□□ -0.92
SCARF1-202ENST00000348987 KRTAP4-5Q9BYR2 181 aa9.2□□□□□ -0.94
SCARF1-202ENST00000348987 M0QZ58 72 aa9.03□□□□□ -0.96
SCARF1-202ENST00000348987 A0A0A0MQY5 61 aa8.93□□□□□ -0.98
SCARF1-202ENST00000348987 HERC2O95714 4834 aa8.93□□□□□ -0.98
SCARF1-202ENST00000348987 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
SCARF1-202ENST00000348987 LUZP6Q538Z0 58 aa8.83□□□□□ -1
SCARF1-202ENST00000348987 MUC2Q02817 5179 aa8.78□□□□□ -1
SCARF1-202ENST00000348987 R4GN34 69 aa8.78□□□□□ -1
SCARF1-202ENST00000348987 J3QL48 77 aa8.76□□□□□ -1.01
SCARF1-202ENST00000348987 MUC17Q685J3 4493 aa8.73□□□□□ -1.01
SCARF1-202ENST00000348987 KRTAP4-1Q9BYQ7 146 aa8.69□□□□□ -1.02
SCARF1-202ENST00000348987 BIRC6Q9NR09 4857 aa8.67□□□□□ -1.02
SCARF1-202ENST00000348987 HERC1Q15751 4861 aa8.64□□□□□ -1.03
SCARF1-202ENST00000348987 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
SCARF1-202ENST00000348987 PCLOQ9Y6V0 5065 aa8.6□□□□□ -1.03
SCARF1-202ENST00000348987 SEC61BP60468 96 aaKnown RBP8.56□□□□□ -1.04
SCARF1-202ENST00000348987 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
SCARF1-202ENST00000348987 KRTAP19-2Q3LHN2 52 aa8.45□□□□□ -1.06
SCARF1-202ENST00000348987 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
SCARF1-202ENST00000348987 HMCN2Q8NDA2 5059 aa8.37□□□□□ -1.07
SCARF1-202ENST00000348987 FAT4Q6V0I7 4981 aa8.37□□□□□ -1.07
SCARF1-202ENST00000348987 FLGP20930 4061 aaPredicted RBP8.29□□□□□ -1.08
SCARF1-202ENST00000348987 RNF213Q63HN8 5207 aa8.28□□□□□ -1.08
SCARF1-202ENST00000348987 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.1
SCARF1-202ENST00000348987 SPRR5A0A1B0GTR4 108 aa8.14□□□□□ -1.11
SCARF1-202ENST00000348987 TNP1P09430 55 aa8.12□□□□□ -1.11
SCARF1-202ENST00000348987 KRTAP23-1A1A580 65 aa8□□□□□ -1.13
SCARF1-202ENST00000348987 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
SCARF1-202ENST00000348987 M0R2T5 61 aa7.86□□□□□ -1.15
SCARF1-202ENST00000348987 MT1HP80294 61 aa7.79□□□□□ -1.16
SCARF1-202ENST00000348987 PRO2289Q9P1D8 64 aa7.78□□□□□ -1.16
SCARF1-202ENST00000348987 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
SCARF1-202ENST00000348987 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
SCARF1-202ENST00000348987 LCE3AQ5TA76 89 aa7.68□□□□□ -1.18
SCARF1-202ENST00000348987 MT1FP04733 61 aa7.65□□□□□ -1.19
SCARF1-202ENST00000348987 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
SCARF1-202ENST00000348987 MT2AP02795 61 aa7.61□□□□□ -1.19
SCARF1-202ENST00000348987 KRTAP9-8Q9BYQ0 159 aa7.58□□□□□ -1.2
SCARF1-202ENST00000348987 INE1O15225 51 aa7.57□□□□□ -1.2
SCARF1-202ENST00000348987 KRTAP8-1Q8IUC2 63 aa7.41□□□□□ -1.22
SCARF1-202ENST00000348987 KRTAP19-8Q3LI54 63 aa7.35□□□□□ -1.23
SCARF1-202ENST00000348987 MT1BP07438 61 aa7.35□□□□□ -1.23
SCARF1-202ENST00000348987 USH2AO75445 5202 aa7.34□□□□□ -1.24
SCARF1-202ENST00000348987 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
SCARF1-202ENST00000348987 MT1XP80297 61 aa7.3□□□□□ -1.24
SCARF1-202ENST00000348987 KRTAP12-3P60328 96 aa7.25□□□□□ -1.25
SCARF1-202ENST00000348987 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
SCARF1-202ENST00000348987 KRTAP10-12P60413 245 aa7.21□□□□□ -1.25
SCARF1-202ENST00000348987 KRTAP10-7P60409 375 aaPredicted RBP7.14□□□□□ -1.27
SCARF1-202ENST00000348987 LCE2BO14633 110 aa7.07□□□□□ -1.28
SCARF1-202ENST00000348987 KMT2DO14686 5537 aa7.07□□□□□ -1.28
SCARF1-202ENST00000348987 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
SCARF1-202ENST00000348987 FSIP2Q5CZC0 6907 aa6.89□□□□□ -1.31
SCARF1-202ENST00000348987 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
SCARF1-202ENST00000348987 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
SCARF1-202ENST00000348987 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.33
SCARF1-202ENST00000348987 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
SCARF1-202ENST00000348987 KRTAP9-6A8MVA2 160 aa6.73□□□□□ -1.33
SCARF1-202ENST00000348987 SSPOA2VEC9 5147 aa6.69□□□□□ -1.34
SCARF1-202ENST00000348987 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
SCARF1-202ENST00000348987 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
SCARF1-202ENST00000348987 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
SCARF1-202ENST00000348987 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
SCARF1-202ENST00000348987 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
SCARF1-202ENST00000348987 FCGBPQ9Y6R7 5405 aaPredicted RBP6.32□□□□□ -1.4
SCARF1-202ENST00000348987 MT1EP04732 61 aa6.29□□□□□ -1.4
SCARF1-202ENST00000348987 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
SCARF1-202ENST00000348987 MT1LQ93083 61 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms