RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 KRTAP12-2P59991 146 aa7.85□□□□□ -1.15
LMNA-201ENST00000347559 HYDINQ4G0P3 5121 aa7.79□□□□□ -1.16
LMNA-201ENST00000347559 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
LMNA-201ENST00000347559 KRTAP12-1P59990 96 aa7.71□□□□□ -1.18
LMNA-201ENST00000347559 PKHD1P08F94 4074 aa7.7□□□□□ -1.18
LMNA-201ENST00000347559 FAT1Q14517 4588 aa7.69□□□□□ -1.18
LMNA-201ENST00000347559 SACSQ9NZJ4 4579 aa7.67□□□□□ -1.18
LMNA-201ENST00000347559 XP32Q5T750 250 aa7.64□□□□□ -1.19
LMNA-201ENST00000347559 A0A0A0MQY5 61 aa7.6□□□□□ -1.19
LMNA-201ENST00000347559 DYNC1H1Q14204 4646 aaKnown RBP7.59□□□□□ -1.19
LMNA-201ENST00000347559 KRTAP10-4P60372 401 aaPredicted RBP7.54□□□□□ -1.2
LMNA-201ENST00000347559 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
LMNA-201ENST00000347559 MYCBP2O75592 4640 aa7.52□□□□□ -1.21
LMNA-201ENST00000347559 HSPG2P98160 4391 aa7.51□□□□□ -1.21
LMNA-201ENST00000347559 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
LMNA-201ENST00000347559 M0QZ58 72 aa7.47□□□□□ -1.21
LMNA-201ENST00000347559 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
LMNA-201ENST00000347559 APOBP04114 4563 aaKnown RBP7.46□□□□□ -1.22
LMNA-201ENST00000347559 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
LMNA-201ENST00000347559 LRP1Q07954 4544 aaKnown RBP7.43□□□□□ -1.22
LMNA-201ENST00000347559 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
LMNA-201ENST00000347559 R4GN34 69 aa7.34□□□□□ -1.23
LMNA-201ENST00000347559 A0A1B0GVY2 172 aa7.29□□□□□ -1.24
LMNA-201ENST00000347559 LPAP08519 4548 aa7.26□□□□□ -1.25
LMNA-201ENST00000347559 KRTAP21-3Q3LHN1 58 aa7.22□□□□□ -1.25
LMNA-201ENST00000347559 TNXBP22105 4242 aa7.21□□□□□ -1.26
LMNA-201ENST00000347559 Q5VSD8 79 aa7.17□□□□□ -1.26
LMNA-201ENST00000347559 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
LMNA-201ENST00000347559 LRP2P98164 4655 aa7.15□□□□□ -1.26
LMNA-201ENST00000347559 KMT2CQ8NEZ4 4911 aaKnown RBP7.14□□□□□ -1.27
LMNA-201ENST00000347559 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
LMNA-201ENST00000347559 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
LMNA-201ENST00000347559 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
LMNA-201ENST00000347559 KRTAP17-1Q9BYP8 105 aa6.93□□□□□ -1.3
LMNA-201ENST00000347559 RYR2Q92736 4967 aa6.89□□□□□ -1.31
LMNA-201ENST00000347559 RYR1P21817 5038 aa6.82□□□□□ -1.32
LMNA-201ENST00000347559 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
LMNA-201ENST00000347559 TNP1P09430 55 aa6.77□□□□□ -1.33
LMNA-201ENST00000347559 SEC61BP60468 96 aaKnown RBP6.72□□□□□ -1.33
LMNA-201ENST00000347559 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
LMNA-201ENST00000347559 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.34
LMNA-201ENST00000347559 J3QL48 77 aa6.68□□□□□ -1.34
LMNA-201ENST00000347559 RYR3Q15413 4870 aa6.68□□□□□ -1.34
LMNA-201ENST00000347559 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
LMNA-201ENST00000347559 MUC17Q685J3 4493 aa6.62□□□□□ -1.35
LMNA-201ENST00000347559 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
LMNA-201ENST00000347559 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
LMNA-201ENST00000347559 PRO2289Q9P1D8 64 aa6.49□□□□□ -1.37
LMNA-201ENST00000347559 MUC2Q02817 5179 aa6.47□□□□□ -1.37
LMNA-201ENST00000347559 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
LMNA-201ENST00000347559 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
LMNA-201ENST00000347559 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
LMNA-201ENST00000347559 INE1O15225 51 aa6.29□□□□□ -1.4
LMNA-201ENST00000347559 LCE2DQ5TA82 110 aaPredicted RBP6.28□□□□□ -1.4
LMNA-201ENST00000347559 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
LMNA-201ENST00000347559 PCLOQ9Y6V0 5065 aa6.24□□□□□ -1.41
LMNA-201ENST00000347559 KRTAP19-1Q8IUB9 90 aa6.16□□□□□ -1.42
LMNA-201ENST00000347559 HERC1Q15751 4861 aa6.15□□□□□ -1.42
LMNA-201ENST00000347559 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
LMNA-201ENST00000347559 FAT4Q6V0I7 4981 aa6.13□□□□□ -1.43
LMNA-201ENST00000347559 M0R2T5 61 aa6.11□□□□□ -1.43
LMNA-201ENST00000347559 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
LMNA-201ENST00000347559 HERC2O95714 4834 aa6.04□□□□□ -1.44
LMNA-201ENST00000347559 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
LMNA-201ENST00000347559 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
LMNA-201ENST00000347559 LCE2CQ5TA81 110 aa5.96□□□□□ -1.46
LMNA-201ENST00000347559 BIRC6Q9NR09 4857 aa5.95□□□□□ -1.46
LMNA-201ENST00000347559 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
LMNA-201ENST00000347559 MT1FP04733 61 aa5.9□□□□□ -1.46
LMNA-201ENST00000347559 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
LMNA-201ENST00000347559 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
LMNA-201ENST00000347559 MT2AP02795 61 aa5.85□□□□□ -1.47
LMNA-201ENST00000347559 MT1XP80297 61 aa5.85□□□□□ -1.47
LMNA-201ENST00000347559 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
LMNA-201ENST00000347559 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
LMNA-201ENST00000347559 MT1HP80294 61 aa5.8□□□□□ -1.48
LMNA-201ENST00000347559 MT1BP07438 61 aa5.77□□□□□ -1.49
LMNA-201ENST00000347559 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
LMNA-201ENST00000347559 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
LMNA-201ENST00000347559 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
LMNA-201ENST00000347559 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
LMNA-201ENST00000347559 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
LMNA-201ENST00000347559 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
LMNA-201ENST00000347559 KMT2DO14686 5537 aa5.53□□□□□ -1.52
LMNA-201ENST00000347559 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
LMNA-201ENST00000347559 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
LMNA-201ENST00000347559 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
LMNA-201ENST00000347559 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
LMNA-201ENST00000347559 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.54
LMNA-201ENST00000347559 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.54
LMNA-201ENST00000347559 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
LMNA-201ENST00000347559 USH2AO75445 5202 aa5.36□□□□□ -1.55
LMNA-201ENST00000347559 LCE2BO14633 110 aa5.21□□□□□ -1.57
LMNA-201ENST00000347559 KRTAP19-7Q3SYF9 63 aa5.2□□□□□ -1.58
LMNA-201ENST00000347559 MT1LQ93083 61 aa5.08□□□□□ -1.6
LMNA-201ENST00000347559 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
LMNA-201ENST00000347559 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
LMNA-201ENST00000347559 MT1EP04732 61 aa5□□□□□ -1.61
LMNA-201ENST00000347559 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
LMNA-201ENST00000347559 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms