RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 RYR3Q15413 4870 aa8.16□□□□□ -1.1
LRP8-202ENST00000347547 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
LRP8-202ENST00000347547 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
LRP8-202ENST00000347547 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
LRP8-202ENST00000347547 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
LRP8-202ENST00000347547 FAT1Q14517 4588 aa8.09□□□□□ -1.11
LRP8-202ENST00000347547 KRTAP10-4P60372 401 aaPredicted RBP8.07□□□□□ -1.12
LRP8-202ENST00000347547 A0A0D9SG42 100 aa8.06□□□□□ -1.12
LRP8-202ENST00000347547 SMR3BP02814 79 aaPredicted RBP8.06□□□□□ -1.12
LRP8-202ENST00000347547 PKHD1L1Q86WI1 4243 aa8.05□□□□□ -1.12
LRP8-202ENST00000347547 C10orf95Q9H7T3 257 aa8.03□□□□□ -1.12
LRP8-202ENST00000347547 NDUFAF8A1L188 74 aa8.03□□□□□ -1.12
LRP8-202ENST00000347547 S4R3F8 94 aa7.99□□□□□ -1.13
LRP8-202ENST00000347547 HSPG2P98160 4391 aa7.99□□□□□ -1.13
LRP8-202ENST00000347547 RYR1P21817 5038 aa7.94□□□□□ -1.14
LRP8-202ENST00000347547 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
LRP8-202ENST00000347547 XP32Q5T750 250 aa7.88□□□□□ -1.15
LRP8-202ENST00000347547 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
LRP8-202ENST00000347547 KRTAP17-1Q9BYP8 105 aa7.86□□□□□ -1.15
LRP8-202ENST00000347547 EPPK1P58107 5090 aaKnown RBP7.85□□□□□ -1.15
LRP8-202ENST00000347547 KIAA1109Q2LD37 5005 aa7.84□□□□□ -1.15
LRP8-202ENST00000347547 TNXBP22105 4242 aa7.8□□□□□ -1.16
LRP8-202ENST00000347547 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
LRP8-202ENST00000347547 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
LRP8-202ENST00000347547 Q5VSD8 79 aa7.78□□□□□ -1.16
LRP8-202ENST00000347547 FAT3Q8TDW7 4589 aa7.77□□□□□ -1.17
LRP8-202ENST00000347547 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
LRP8-202ENST00000347547 M0QZ58 72 aa7.73□□□□□ -1.17
LRP8-202ENST00000347547 MYCBP2O75592 4640 aa7.65□□□□□ -1.19
LRP8-202ENST00000347547 MT1HL1P0DM35 61 aa7.59□□□□□ -1.2
LRP8-202ENST00000347547 KRTAP4-5Q9BYR2 181 aa7.54□□□□□ -1.2
LRP8-202ENST00000347547 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
LRP8-202ENST00000347547 BIRC6Q9NR09 4857 aa7.49□□□□□ -1.21
LRP8-202ENST00000347547 A0A0A0MQY5 61 aa7.48□□□□□ -1.21
LRP8-202ENST00000347547 HERC2O95714 4834 aa7.47□□□□□ -1.21
LRP8-202ENST00000347547 ABCA13Q86UQ4 5058 aa7.47□□□□□ -1.21
LRP8-202ENST00000347547 LUZP6Q538Z0 58 aa7.43□□□□□ -1.22
LRP8-202ENST00000347547 LPAP08519 4548 aa7.36□□□□□ -1.23
LRP8-202ENST00000347547 R4GN34 69 aa7.35□□□□□ -1.23
LRP8-202ENST00000347547 PP632Q6XCG6 107 aa7.31□□□□□ -1.24
LRP8-202ENST00000347547 LRP2P98164 4655 aa7.28□□□□□ -1.24
LRP8-202ENST00000347547 PCLOQ9Y6V0 5065 aa7.16□□□□□ -1.26
LRP8-202ENST00000347547 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
LRP8-202ENST00000347547 J3QL48 77 aa7.12□□□□□ -1.27
LRP8-202ENST00000347547 CAMK2N1Q7Z7J9 78 aa7.03□□□□□ -1.28
LRP8-202ENST00000347547 SPRR5A0A1B0GTR4 108 aa7.02□□□□□ -1.29
LRP8-202ENST00000347547 HERC1Q15751 4861 aa7.02□□□□□ -1.29
LRP8-202ENST00000347547 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
LRP8-202ENST00000347547 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
LRP8-202ENST00000347547 HMCN2Q8NDA2 5059 aa6.97□□□□□ -1.29
LRP8-202ENST00000347547 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
LRP8-202ENST00000347547 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
LRP8-202ENST00000347547 TNP1P09430 55 aa6.88□□□□□ -1.31
LRP8-202ENST00000347547 KRTAP19-2Q3LHN2 52 aa6.83□□□□□ -1.32
LRP8-202ENST00000347547 MUC2Q02817 5179 aa6.72□□□□□ -1.33
LRP8-202ENST00000347547 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
LRP8-202ENST00000347547 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
LRP8-202ENST00000347547 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
LRP8-202ENST00000347547 UBR4Q5T4S7 5183 aa6.6□□□□□ -1.35
LRP8-202ENST00000347547 INE1O15225 51 aa6.55□□□□□ -1.36
LRP8-202ENST00000347547 LCE2CQ5TA81 110 aa6.55□□□□□ -1.36
LRP8-202ENST00000347547 FAT4Q6V0I7 4981 aa6.45□□□□□ -1.38
LRP8-202ENST00000347547 SPRR2GQ9BYE4 73 aa6.44□□□□□ -1.38
LRP8-202ENST00000347547 LCE3AQ5TA76 89 aa6.43□□□□□ -1.38
LRP8-202ENST00000347547 MT1HP80294 61 aa6.36□□□□□ -1.39
LRP8-202ENST00000347547 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
LRP8-202ENST00000347547 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.39
LRP8-202ENST00000347547 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
LRP8-202ENST00000347547 M0R2T5 61 aa6.17□□□□□ -1.42
LRP8-202ENST00000347547 MT2AP02795 61 aa6.15□□□□□ -1.42
LRP8-202ENST00000347547 MT1FP04733 61 aa6.13□□□□□ -1.43
LRP8-202ENST00000347547 KRTAP12-3P60328 96 aa6.12□□□□□ -1.43
LRP8-202ENST00000347547 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
LRP8-202ENST00000347547 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
LRP8-202ENST00000347547 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
LRP8-202ENST00000347547 LCE2AQ5TA79 106 aaPredicted RBP6.05□□□□□ -1.44
LRP8-202ENST00000347547 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
LRP8-202ENST00000347547 MT1XP80297 61 aa6.01□□□□□ -1.45
LRP8-202ENST00000347547 MT1BP07438 61 aa5.94□□□□□ -1.46
LRP8-202ENST00000347547 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
LRP8-202ENST00000347547 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
LRP8-202ENST00000347547 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
LRP8-202ENST00000347547 LCE2BO14633 110 aa5.76□□□□□ -1.49
LRP8-202ENST00000347547 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
LRP8-202ENST00000347547 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
LRP8-202ENST00000347547 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
LRP8-202ENST00000347547 KRTAP2-1Q9BYU5 128 aa5.66□□□□□ -1.5
LRP8-202ENST00000347547 USH2AO75445 5202 aa5.63□□□□□ -1.51
LRP8-202ENST00000347547 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
LRP8-202ENST00000347547 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
LRP8-202ENST00000347547 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
LRP8-202ENST00000347547 KMT2DO14686 5537 aa5.45□□□□□ -1.54
LRP8-202ENST00000347547 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
LRP8-202ENST00000347547 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
LRP8-202ENST00000347547 LCE2DQ5TA82 110 aaPredicted RBP5.39□□□□□ -1.55
LRP8-202ENST00000347547 KRTAP19-7Q3SYF9 63 aa5.35□□□□□ -1.55
LRP8-202ENST00000347547 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
LRP8-202ENST00000347547 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
LRP8-202ENST00000347547 FSIP2Q5CZC0 6907 aa5.29□□□□□ -1.56
LRP8-202ENST00000347547 MT1LQ93083 61 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms