RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 SPRR2GQ9BYE4 73 aa9□□□□□ -0.97
CLTA-202ENST00000345519 FAM236AA0A1B0GUQ0 79 aa8.97□□□□□ -0.97
CLTA-202ENST00000345519 FAM236BA0A1B0GV22 79 aa8.97□□□□□ -0.97
CLTA-202ENST00000345519 A8MUN3 132 aa8.97□□□□□ -0.97
CLTA-202ENST00000345519 KRTAP9-7A8MTY7 169 aa8.96□□□□□ -0.98
CLTA-202ENST00000345519 LINC00208Q96KT6 92 aa8.96□□□□□ -0.98
CLTA-202ENST00000345519 KLKP1Q107X0 134 aa8.94□□□□□ -0.98
CLTA-202ENST00000345519 KRTAP19-8Q3LI54 63 aa8.93□□□□□ -0.98
CLTA-202ENST00000345519 MP68P56378 58 aa8.92□□□□□ -0.98
CLTA-202ENST00000345519 H0YAA0 97 aa8.9□□□□□ -0.98
CLTA-202ENST00000345519 H3BPC8 53 aa8.9□□□□□ -0.98
CLTA-202ENST00000345519 MT1BP07438 61 aa8.9□□□□□ -0.98
CLTA-202ENST00000345519 IMUPQ9GZP8 106 aa8.85□□□□□ -0.99
CLTA-202ENST00000345519 CRIPTQ9P021 101 aa8.85□□□□□ -0.99
CLTA-202ENST00000345519 NDUFC1O43677 76 aa8.84□□□□□ -0.99
CLTA-202ENST00000345519 SYNE2Q8WXH0 6885 aaKnown RBP8.83□□□□□ -1
CLTA-202ENST00000345519 Q5VV11 94 aa8.82□□□□□ -1
CLTA-202ENST00000345519 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
CLTA-202ENST00000345519 MT-ATP8P03928 68 aa8.73□□□□□ -1.01
CLTA-202ENST00000345519 KRTAP10-5P60370 271 aa8.67□□□□□ -1.02
CLTA-202ENST00000345519 A6NN06 94 aa8.66□□□□□ -1.02
CLTA-202ENST00000345519 SMIM20Q8N5G0 67 aa8.66□□□□□ -1.02
CLTA-202ENST00000345519 ADM2Q7Z4H4 148 aa8.65□□□□□ -1.02
CLTA-202ENST00000345519 TRAV7A0A075B6U4 112 aa8.64□□□□□ -1.03
CLTA-202ENST00000345519 KRTAP6-3Q3LI67 103 aa8.59□□□□□ -1.03
CLTA-202ENST00000345519 KRTAP3-2Q9BYR7 98 aa8.53□□□□□ -1.04
CLTA-202ENST00000345519 ANAPC13Q9BS18 74 aa8.51□□□□□ -1.05
CLTA-202ENST00000345519 P0C880 135 aa8.5□□□□□ -1.05
CLTA-202ENST00000345519 C20orf197Q8N268 126 aa8.5□□□□□ -1.05
CLTA-202ENST00000345519 ACYP2P14621 99 aa8.48□□□□□ -1.05
CLTA-202ENST00000345519 R4GN34 69 aa8.43□□□□□ -1.06
CLTA-202ENST00000345519 SPANXA2-OT1Q8N9U9 137 aa8.39□□□□□ -1.07
CLTA-202ENST00000345519 SNURFQ9Y675 71 aa8.39□□□□□ -1.07
CLTA-202ENST00000345519 SERP2Q8N6R1 65 aa8.38□□□□□ -1.07
CLTA-202ENST00000345519 MT1XP80297 61 aa8.36□□□□□ -1.07
CLTA-202ENST00000345519 M0QZ58 72 aa8.35□□□□□ -1.07
CLTA-202ENST00000345519 MUC12Q9UKN1 5478 aa8.35□□□□□ -1.07
CLTA-202ENST00000345519 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
CLTA-202ENST00000345519 KRTAP5-9P26371 169 aa8.33□□□□□ -1.08
CLTA-202ENST00000345519 PRO2289Q9P1D8 64 aa8.32□□□□□ -1.08
CLTA-202ENST00000345519 PLAC4Q8WY50 150 aa8.31□□□□□ -1.08
CLTA-202ENST00000345519 COX7CP15954 63 aa8.28□□□□□ -1.08
CLTA-202ENST00000345519 CCDC179H3BU77 68 aa8.26□□□□□ -1.09
CLTA-202ENST00000345519 NEBP20929 6669 aa8.26□□□□□ -1.09
CLTA-202ENST00000345519 KMT2DO14686 5537 aa8.24□□□□□ -1.09
CLTA-202ENST00000345519 CHKB-CPT1BH3BT56 60 aa8.24□□□□□ -1.09
CLTA-202ENST00000345519 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
CLTA-202ENST00000345519 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
CLTA-202ENST00000345519 RPS28P62857 69 aaKnown RBP8.12□□□□□ -1.11
CLTA-202ENST00000345519 MDN1Q9NU22 5596 aa8.11□□□□□ -1.11
CLTA-202ENST00000345519 TMEM258P61165 79 aa8.1□□□□□ -1.11
CLTA-202ENST00000345519 COA5Q86WW8 74 aa8.07□□□□□ -1.12
CLTA-202ENST00000345519 H7BZZ5 65 aa8.05□□□□□ -1.12
CLTA-202ENST00000345519 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
CLTA-202ENST00000345519 KRTAP13-4Q3LI77 160 aa8.02□□□□□ -1.13
CLTA-202ENST00000345519 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
CLTA-202ENST00000345519 KRTAP8-1Q8IUC2 63 aa7.96□□□□□ -1.14
CLTA-202ENST00000345519 SPRR2FQ96RM1 72 aa7.96□□□□□ -1.14
CLTA-202ENST00000345519 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
CLTA-202ENST00000345519 ATP5EP56381 51 aaPredicted RBP7.93□□□□□ -1.14
CLTA-202ENST00000345519 KRTAP4-8A0A0G2JLE6 195 aa7.91□□□□□ -1.14
CLTA-202ENST00000345519 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
CLTA-202ENST00000345519 SERP1Q9Y6X1 66 aa7.85□□□□□ -1.15
CLTA-202ENST00000345519 KRTAP20-1Q3LI63 56 aa7.84□□□□□ -1.15
CLTA-202ENST00000345519 SEC61GP60059 68 aa7.83□□□□□ -1.16
CLTA-202ENST00000345519 SVIPQ8NHG7 77 aa7.83□□□□□ -1.16
CLTA-202ENST00000345519 SPRR2EP22531 72 aa7.81□□□□□ -1.16
CLTA-202ENST00000345519 SPRR2BP35325 72 aa7.81□□□□□ -1.16
CLTA-202ENST00000345519 SPRR2AP35326 72 aa7.81□□□□□ -1.16
CLTA-202ENST00000345519 LCE1AQ5T7P2 110 aa7.8□□□□□ -1.16
CLTA-202ENST00000345519 A0A1B0GU33 70 aa7.73□□□□□ -1.17
CLTA-202ENST00000345519 SMIM26A0A096LP01 95 aa7.72□□□□□ -1.17
CLTA-202ENST00000345519 SPATA8Q6RVD6 105 aa7.71□□□□□ -1.18
CLTA-202ENST00000345519 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
CLTA-202ENST00000345519 KRTAP2-3P0C7H8 128 aa7.7□□□□□ -1.18
CLTA-202ENST00000345519 KRTAP2-4Q9BYR9 128 aa7.7□□□□□ -1.18
CLTA-202ENST00000345519 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
CLTA-202ENST00000345519 A0A0D9SG42 100 aa7.63□□□□□ -1.19
CLTA-202ENST00000345519 A0A1B0GU69 56 aa7.62□□□□□ -1.19
CLTA-202ENST00000345519 SPRR2DP22532 72 aa7.55□□□□□ -1.2
CLTA-202ENST00000345519 SPINT4Q6UDR6 99 aa7.53□□□□□ -1.2
CLTA-202ENST00000345519 KRTAP19-7Q3SYF9 63 aa7.5□□□□□ -1.21
CLTA-202ENST00000345519 Q1T7F1 81 aa7.48□□□□□ -1.21
CLTA-202ENST00000345519 V9GYY9 64 aa7.48□□□□□ -1.21
CLTA-202ENST00000345519 KRTAP2-2Q9BYT5 123 aa7.46□□□□□ -1.22
CLTA-202ENST00000345519 KRTAP2-1Q9BYU5 128 aa7.46□□□□□ -1.22
CLTA-202ENST00000345519 LINC01558Q9Y6Z2 57 aa7.45□□□□□ -1.22
CLTA-202ENST00000345519 A8MU10 97 aa7.44□□□□□ -1.22
CLTA-202ENST00000345519 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
CLTA-202ENST00000345519 MT1EP04732 61 aa7.4□□□□□ -1.22
CLTA-202ENST00000345519 PRO0628Q9UI54 55 aa7.38□□□□□ -1.23
CLTA-202ENST00000345519 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
CLTA-202ENST00000345519 LCE5AQ5TCM9 118 aa7.36□□□□□ -1.23
CLTA-202ENST00000345519 KRTAP19-3Q7Z4W3 81 aa7.32□□□□□ -1.24
CLTA-202ENST00000345519 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
CLTA-202ENST00000345519 DSTQ03001 7570 aaKnown RBP7.26□□□□□ -1.25
CLTA-202ENST00000345519 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
CLTA-202ENST00000345519 UQCR11O14957 56 aa7.21□□□□□ -1.26
CLTA-202ENST00000345519 TNP1P09430 55 aa7.19□□□□□ -1.26
CLTA-202ENST00000345519 BRK1Q8WUW1 75 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms