RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 COX6B2Q6YFQ2 88 aa11.2□□□□□ -0.62
CCDC38-201ENST00000344280 ADM2Q7Z4H4 148 aa11.14□□□□□ -0.63
CCDC38-201ENST00000344280 XP32Q5T750 250 aa11.13□□□□□ -0.63
CCDC38-201ENST00000344280 RPL37P61927 97 aaKnown RBP11.12□□□□□ -0.63
CCDC38-201ENST00000344280 H0YAA0 97 aa11.11□□□□□ -0.63
CCDC38-201ENST00000344280 MT1HL1P0DM35 61 aa11.07□□□□□ -0.64
CCDC38-201ENST00000344280 A0A1B0GU33 70 aa11.04□□□□□ -0.64
CCDC38-201ENST00000344280 EPPK1P58107 5090 aaKnown RBP11.03□□□□□ -0.64
CCDC38-201ENST00000344280 H1FX-AS1Q4G0G2 97 aa11□□□□□ -0.65
CCDC38-201ENST00000344280 LPAP08519 4548 aa10.98□□□□□ -0.65
CCDC38-201ENST00000344280 KRTAP3-3Q9BYR6 98 aa10.97□□□□□ -0.65
CCDC38-201ENST00000344280 LRP2P98164 4655 aa10.91□□□□□ -0.66
CCDC38-201ENST00000344280 CSAG1Q6PB30 78 aa10.9□□□□□ -0.66
CCDC38-201ENST00000344280 H3BS24 57 aa10.84□□□□□ -0.67
CCDC38-201ENST00000344280 KRTAP10-6P60371 365 aaPredicted RBP10.83□□□□□ -0.68
CCDC38-201ENST00000344280 ABCA13Q86UQ4 5058 aa10.82□□□□□ -0.68
CCDC38-201ENST00000344280 S4R3F8 94 aa10.82□□□□□ -0.68
CCDC38-201ENST00000344280 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
CCDC38-201ENST00000344280 KRTAP4-5Q9BYR2 181 aa10.75□□□□□ -0.69
CCDC38-201ENST00000344280 KRTAP13-4Q3LI77 160 aa10.73□□□□□ -0.69
CCDC38-201ENST00000344280 TPRXLQ17RH7 258 aa10.72□□□□□ -0.69
CCDC38-201ENST00000344280 P0C880 135 aa10.65□□□□□ -0.7
CCDC38-201ENST00000344280 KRTAP25-1Q3LHN0 102 aa10.63□□□□□ -0.71
CCDC38-201ENST00000344280 A0A0D9SG42 100 aa10.6□□□□□ -0.71
CCDC38-201ENST00000344280 K7ERS5 55 aa10.55□□□□□ -0.72
CCDC38-201ENST00000344280 ROMO1P60602 79 aa10.51□□□□□ -0.73
CCDC38-201ENST00000344280 CRIPTQ9P021 101 aa10.44□□□□□ -0.74
CCDC38-201ENST00000344280 HERC2O95714 4834 aa10.39□□□□□ -0.75
CCDC38-201ENST00000344280 MUC17Q685J3 4493 aa10.38□□□□□ -0.75
CCDC38-201ENST00000344280 KRTAP12-2P59991 146 aa10.34□□□□□ -0.75
CCDC38-201ENST00000344280 KRTAP4-1Q9BYQ7 146 aa10.32□□□□□ -0.76
CCDC38-201ENST00000344280 SEC61BP60468 96 aaKnown RBP10.28□□□□□ -0.76
CCDC38-201ENST00000344280 J3QL48 77 aa10.27□□□□□ -0.76
CCDC38-201ENST00000344280 KRTAP12-1P59990 96 aa10.25□□□□□ -0.77
CCDC38-201ENST00000344280 BIRC6Q9NR09 4857 aa10.23□□□□□ -0.77
CCDC38-201ENST00000344280 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
CCDC38-201ENST00000344280 M0QZ58 72 aa10.19□□□□□ -0.78
CCDC38-201ENST00000344280 MUC2Q02817 5179 aa10.15□□□□□ -0.78
CCDC38-201ENST00000344280 KRTAP19-2Q3LHN2 52 aa10.09□□□□□ -0.79
CCDC38-201ENST00000344280 C10orf95Q9H7T3 257 aa10.09□□□□□ -0.79
CCDC38-201ENST00000344280 LORP23490 312 aaPredicted RBP10.07□□□□□ -0.8
CCDC38-201ENST00000344280 R4GN34 69 aa10.04□□□□□ -0.8
CCDC38-201ENST00000344280 HERC1Q15751 4861 aa9.95□□□□□ -0.82
CCDC38-201ENST00000344280 PCLOQ9Y6V0 5065 aa9.87□□□□□ -0.83
CCDC38-201ENST00000344280 FLGP20930 4061 aaPredicted RBP9.86□□□□□ -0.83
CCDC38-201ENST00000344280 KRTAP15-1Q3LI76 137 aa9.82□□□□□ -0.84
CCDC38-201ENST00000344280 HMCN2Q8NDA2 5059 aa9.8□□□□□ -0.84
CCDC38-201ENST00000344280 NDUFAF8A1L188 74 aa9.68□□□□□ -0.86
CCDC38-201ENST00000344280 FAT4Q6V0I7 4981 aa9.66□□□□□ -0.86
CCDC38-201ENST00000344280 LCE2CQ5TA81 110 aa9.54□□□□□ -0.88
CCDC38-201ENST00000344280 CAMK2N1Q7Z7J9 78 aa9.49□□□□□ -0.89
CCDC38-201ENST00000344280 UBR4Q5T4S7 5183 aa9.45□□□□□ -0.9
CCDC38-201ENST00000344280 RNF213Q63HN8 5207 aa9.45□□□□□ -0.9
CCDC38-201ENST00000344280 MT1HP80294 61 aa9.27□□□□□ -0.93
CCDC38-201ENST00000344280 M0R2T5 61 aa9.25□□□□□ -0.93
CCDC38-201ENST00000344280 KRTAP19-1Q8IUB9 90 aa9.22□□□□□ -0.93
CCDC38-201ENST00000344280 SPRR2GQ9BYE4 73 aa9.21□□□□□ -0.94
CCDC38-201ENST00000344280 PP632Q6XCG6 107 aa9.16□□□□□ -0.94
CCDC38-201ENST00000344280 PLAC4Q8WY50 150 aa9.15□□□□□ -0.94
CCDC38-201ENST00000344280 MT1FP04733 61 aa9.1□□□□□ -0.95
CCDC38-201ENST00000344280 TNP1P09430 55 aa9.1□□□□□ -0.95
CCDC38-201ENST00000344280 MT2AP02795 61 aa9.08□□□□□ -0.96
CCDC38-201ENST00000344280 KRTAP9-8Q9BYQ0 159 aa9.05□□□□□ -0.96
CCDC38-201ENST00000344280 KRTAP10-10P60014 251 aa9.04□□□□□ -0.96
CCDC38-201ENST00000344280 A0A0A0MQY5 61 aa9□□□□□ -0.97
CCDC38-201ENST00000344280 LUZP6Q538Z0 58 aa8.98□□□□□ -0.97
CCDC38-201ENST00000344280 KRTAP23-1A1A580 65 aa8.89□□□□□ -0.99
CCDC38-201ENST00000344280 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
CCDC38-201ENST00000344280 MT1BP07438 61 aa8.76□□□□□ -1.01
CCDC38-201ENST00000344280 LCE3AQ5TA76 89 aa8.73□□□□□ -1.01
CCDC38-201ENST00000344280 KRTAP10-5P60370 271 aa8.67□□□□□ -1.02
CCDC38-201ENST00000344280 MT1XP80297 61 aa8.66□□□□□ -1.02
CCDC38-201ENST00000344280 KRTAP9-3Q9BYQ3 159 aa8.66□□□□□ -1.02
CCDC38-201ENST00000344280 SPRR5A0A1B0GTR4 108 aa8.56□□□□□ -1.04
CCDC38-201ENST00000344280 KRTAP8-1Q8IUC2 63 aa8.46□□□□□ -1.06
CCDC38-201ENST00000344280 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
CCDC38-201ENST00000344280 KRTAP10-12P60413 245 aa8.4□□□□□ -1.06
CCDC38-201ENST00000344280 USH2AO75445 5202 aa8.39□□□□□ -1.07
CCDC38-201ENST00000344280 LCE2BO14633 110 aa8.37□□□□□ -1.07
CCDC38-201ENST00000344280 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
CCDC38-201ENST00000344280 KRTAP12-3P60328 96 aa8.28□□□□□ -1.08
CCDC38-201ENST00000344280 PRO2289Q9P1D8 64 aa8.26□□□□□ -1.09
CCDC38-201ENST00000344280 KMT2DO14686 5537 aa8.17□□□□□ -1.1
CCDC38-201ENST00000344280 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
CCDC38-201ENST00000344280 KRTAP19-5Q3LI72 72 aa8.03□□□□□ -1.12
CCDC38-201ENST00000344280 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
CCDC38-201ENST00000344280 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
CCDC38-201ENST00000344280 INE1O15225 51 aa7.97□□□□□ -1.13
CCDC38-201ENST00000344280 LCE3CQ5T5A8 94 aa7.79□□□□□ -1.16
CCDC38-201ENST00000344280 SSPOA2VEC9 5147 aa7.75□□□□□ -1.17
CCDC38-201ENST00000344280 KRTAP19-7Q3SYF9 63 aa7.73□□□□□ -1.17
CCDC38-201ENST00000344280 FSIP2Q5CZC0 6907 aa7.65□□□□□ -1.18
CCDC38-201ENST00000344280 KRTAP9-6A8MVA2 160 aa7.58□□□□□ -1.2
CCDC38-201ENST00000344280 KRTAP4-7Q9BYR0 210 aa7.58□□□□□ -1.2
CCDC38-201ENST00000344280 MT1EP04732 61 aa7.5□□□□□ -1.21
CCDC38-201ENST00000344280 KRTAP19-6Q3LI70 58 aa7.49□□□□□ -1.21
CCDC38-201ENST00000344280 MT1LQ93083 61 aa7.47□□□□□ -1.21
CCDC38-201ENST00000344280 FCGBPQ9Y6R7 5405 aaPredicted RBP7.3□□□□□ -1.24
CCDC38-201ENST00000344280 KRTAP19-4Q3LI73 84 aa7.26□□□□□ -1.25
CCDC38-201ENST00000344280 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms