RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 KRTAP21-3Q3LHN1 58 aa12.43□□□□□ -0.42
NELFB-201ENST00000343053 CRIPTQ9P021 101 aa12.42□□□□□ -0.42
NELFB-201ENST00000343053 KRTAP10-8P60410 259 aa12.41□□□□□ -0.42
NELFB-201ENST00000343053 Q5VSD8 79 aa12.4□□□□□ -0.42
NELFB-201ENST00000343053 KRTAP3-3Q9BYR6 98 aa12.35□□□□□ -0.43
NELFB-201ENST00000343053 XP32Q5T750 250 aa12.33□□□□□ -0.44
NELFB-201ENST00000343053 RYR3Q15413 4870 aa12.32□□□□□ -0.44
NELFB-201ENST00000343053 RPL37P61927 97 aaKnown RBP12.32□□□□□ -0.44
NELFB-201ENST00000343053 KRTAP25-1Q3LHN0 102 aa12.32□□□□□ -0.44
NELFB-201ENST00000343053 A0A0D9SG42 100 aa12.31□□□□□ -0.44
NELFB-201ENST00000343053 LPAP08519 4548 aa12.31□□□□□ -0.44
NELFB-201ENST00000343053 KRTAP17-1Q9BYP8 105 aa12.29□□□□□ -0.44
NELFB-201ENST00000343053 KRTAP13-4Q3LI77 160 aa12.28□□□□□ -0.44
NELFB-201ENST00000343053 KRTAP10-6P60371 365 aaPredicted RBP12.27□□□□□ -0.44
NELFB-201ENST00000343053 ROMO1P60602 79 aa12.24□□□□□ -0.45
NELFB-201ENST00000343053 K7ERS5 55 aa12.23□□□□□ -0.45
NELFB-201ENST00000343053 KIAA1109Q2LD37 5005 aa12.23□□□□□ -0.45
NELFB-201ENST00000343053 RYR1P21817 5038 aa12.22□□□□□ -0.45
NELFB-201ENST00000343053 S4R3F8 94 aa12.22□□□□□ -0.45
NELFB-201ENST00000343053 KRTAP3-2Q9BYR7 98 aa12.17□□□□□ -0.46
NELFB-201ENST00000343053 LRP2P98164 4655 aa12.15□□□□□ -0.47
NELFB-201ENST00000343053 P0C880 135 aa12.14□□□□□ -0.47
NELFB-201ENST00000343053 MT1HL1P0DM35 61 aa12.02□□□□□ -0.49
NELFB-201ENST00000343053 EPPK1P58107 5090 aaKnown RBP11.88□□□□□ -0.51
NELFB-201ENST00000343053 ABCA13Q86UQ4 5058 aa11.88□□□□□ -0.51
NELFB-201ENST00000343053 KRTAP12-2P59991 146 aa11.87□□□□□ -0.51
NELFB-201ENST00000343053 C10orf95Q9H7T3 257 aa11.87□□□□□ -0.51
NELFB-201ENST00000343053 SPINT4Q6UDR6 99 aa11.83□□□□□ -0.52
NELFB-201ENST00000343053 TPRXLQ17RH7 258 aa11.82□□□□□ -0.52
NELFB-201ENST00000343053 KRTAP12-1P59990 96 aa11.7□□□□□ -0.54
NELFB-201ENST00000343053 KRTAP4-5Q9BYR2 181 aa11.63□□□□□ -0.55
NELFB-201ENST00000343053 M0QZ58 72 aa11.5□□□□□ -0.57
NELFB-201ENST00000343053 NDUFAF8A1L188 74 aa11.47□□□□□ -0.57
NELFB-201ENST00000343053 MUC17Q685J3 4493 aa11.44□□□□□ -0.58
NELFB-201ENST00000343053 KRTAP15-1Q3LI76 137 aa11.42□□□□□ -0.58
NELFB-201ENST00000343053 R4GN34 69 aa11.4□□□□□ -0.59
NELFB-201ENST00000343053 LORP23490 312 aaPredicted RBP11.37□□□□□ -0.59
NELFB-201ENST00000343053 KRTAP4-1Q9BYQ7 146 aa11.34□□□□□ -0.59
NELFB-201ENST00000343053 MUC2Q02817 5179 aa11.27□□□□□ -0.61
NELFB-201ENST00000343053 SEC61BP60468 96 aaKnown RBP11.25□□□□□ -0.61
NELFB-201ENST00000343053 HERC2O95714 4834 aa11.2□□□□□ -0.62
NELFB-201ENST00000343053 J3QL48 77 aa11.17□□□□□ -0.62
NELFB-201ENST00000343053 KRTAP19-2Q3LHN2 52 aa10.99□□□□□ -0.65
NELFB-201ENST00000343053 CAMK2N1Q7Z7J9 78 aa10.86□□□□□ -0.67
NELFB-201ENST00000343053 HERC1Q15751 4861 aa10.82□□□□□ -0.68
NELFB-201ENST00000343053 PCLOQ9Y6V0 5065 aa10.8□□□□□ -0.68
NELFB-201ENST00000343053 FLGP20930 4061 aaPredicted RBP10.79□□□□□ -0.68
NELFB-201ENST00000343053 BIRC6Q9NR09 4857 aa10.75□□□□□ -0.69
NELFB-201ENST00000343053 FAT4Q6V0I7 4981 aa10.74□□□□□ -0.69
NELFB-201ENST00000343053 PLAC4Q8WY50 150 aa10.7□□□□□ -0.7
NELFB-201ENST00000343053 A0A0A0MQY5 61 aa10.61□□□□□ -0.71
NELFB-201ENST00000343053 HMCN2Q8NDA2 5059 aa10.53□□□□□ -0.72
NELFB-201ENST00000343053 LUZP6Q538Z0 58 aa10.48□□□□□ -0.73
NELFB-201ENST00000343053 PP632Q6XCG6 107 aa10.43□□□□□ -0.74
NELFB-201ENST00000343053 RNF213Q63HN8 5207 aa10.38□□□□□ -0.75
NELFB-201ENST00000343053 TNP1P09430 55 aa10.34□□□□□ -0.75
NELFB-201ENST00000343053 LCE2CQ5TA81 110 aa10.32□□□□□ -0.76
NELFB-201ENST00000343053 M0R2T5 61 aa10.27□□□□□ -0.77
NELFB-201ENST00000343053 UBR4Q5T4S7 5183 aa10.24□□□□□ -0.77
NELFB-201ENST00000343053 KRTAP19-1Q8IUB9 90 aa10.17□□□□□ -0.78
NELFB-201ENST00000343053 SPRR2GQ9BYE4 73 aa10.1□□□□□ -0.79
NELFB-201ENST00000343053 MT1HP80294 61 aa10.06□□□□□ -0.8
NELFB-201ENST00000343053 KRTAP10-10P60014 251 aa10□□□□□ -0.81
NELFB-201ENST00000343053 MT1FP04733 61 aa10□□□□□ -0.81
NELFB-201ENST00000343053 MT2AP02795 61 aa9.94□□□□□ -0.82
NELFB-201ENST00000343053 KRTAP23-1A1A580 65 aa9.93□□□□□ -0.82
NELFB-201ENST00000343053 LCE3AQ5TA76 89 aa9.92□□□□□ -0.82
NELFB-201ENST00000343053 KRTAP9-8Q9BYQ0 159 aa9.82□□□□□ -0.84
NELFB-201ENST00000343053 SPRR5A0A1B0GTR4 108 aa9.81□□□□□ -0.84
NELFB-201ENST00000343053 MT1BP07438 61 aa9.63□□□□□ -0.87
NELFB-201ENST00000343053 KRTAP10-5P60370 271 aa9.6□□□□□ -0.87
NELFB-201ENST00000343053 KRTAP19-8Q3LI54 63 aa9.6□□□□□ -0.87
NELFB-201ENST00000343053 MT1XP80297 61 aa9.59□□□□□ -0.87
NELFB-201ENST00000343053 KRTAP8-1Q8IUC2 63 aa9.47□□□□□ -0.89
NELFB-201ENST00000343053 KRTAP10-12P60413 245 aa9.44□□□□□ -0.9
NELFB-201ENST00000343053 KRTAP10-7P60409 375 aaPredicted RBP9.43□□□□□ -0.9
NELFB-201ENST00000343053 KRTAP9-3Q9BYQ3 159 aa9.38□□□□□ -0.91
NELFB-201ENST00000343053 KRTAP12-3P60328 96 aa9.37□□□□□ -0.91
NELFB-201ENST00000343053 USH2AO75445 5202 aa9.35□□□□□ -0.91
NELFB-201ENST00000343053 KMT2DO14686 5537 aa9.25□□□□□ -0.93
NELFB-201ENST00000343053 PRO2289Q9P1D8 64 aa9.21□□□□□ -0.93
NELFB-201ENST00000343053 LCE2BO14633 110 aa9.09□□□□□ -0.95
NELFB-201ENST00000343053 KRTAP19-5Q3LI72 72 aa9.01□□□□□ -0.97
NELFB-201ENST00000343053 INE1O15225 51 aa8.95□□□□□ -0.98
NELFB-201ENST00000343053 KRTAP4-8A0A0G2JLE6 195 aa8.91□□□□□ -0.98
NELFB-201ENST00000343053 KRTAP4-8Q9BYQ9 185 aa8.91□□□□□ -0.98
NELFB-201ENST00000343053 LCE3CQ5T5A8 94 aa8.78□□□□□ -1
NELFB-201ENST00000343053 LCE2AQ5TA79 106 aaPredicted RBP8.71□□□□□ -1.02
NELFB-201ENST00000343053 KRTAP4-7Q9BYR0 210 aa8.63□□□□□ -1.03
NELFB-201ENST00000343053 KRTAP9-6A8MVA2 160 aa8.62□□□□□ -1.03
NELFB-201ENST00000343053 FSIP2Q5CZC0 6907 aa8.54□□□□□ -1.04
NELFB-201ENST00000343053 KRTAP19-7Q3SYF9 63 aa8.54□□□□□ -1.04
NELFB-201ENST00000343053 SSPOA2VEC9 5147 aa8.4□□□□□ -1.07
NELFB-201ENST00000343053 MT1LQ93083 61 aa8.27□□□□□ -1.08
NELFB-201ENST00000343053 MT1EP04732 61 aa8.26□□□□□ -1.09
NELFB-201ENST00000343053 KRTAP2-3P0C7H8 128 aa8.13□□□□□ -1.11
NELFB-201ENST00000343053 KRTAP2-4Q9BYR9 128 aa8.13□□□□□ -1.11
NELFB-201ENST00000343053 KRTAP2-1Q9BYU5 128 aa8.13□□□□□ -1.11
NELFB-201ENST00000343053 FCGBPQ9Y6R7 5405 aaPredicted RBP8.1□□□□□ -1.11
NELFB-201ENST00000343053 MUC12Q9UKN1 5478 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms