RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 A0A087WVE0 104 aa6.91□□□□□ -1.3
TRA2B-202ENST00000342294 SMIM6P0DI80 62 aa6.9□□□□□ -1.3
TRA2B-202ENST00000342294 H0YAA0 97 aa6.88□□□□□ -1.31
TRA2B-202ENST00000342294 A8MUN3 132 aa6.87□□□□□ -1.31
TRA2B-202ENST00000342294 UQCR10Q9UDW1 63 aa6.87□□□□□ -1.31
TRA2B-202ENST00000342294 PLAC4Q8WY50 150 aa6.86□□□□□ -1.31
TRA2B-202ENST00000342294 NAA38Q9BRA0 125 aaKnown RBP6.86□□□□□ -1.31
TRA2B-202ENST00000342294 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
TRA2B-202ENST00000342294 TSTD3H0UI37 97 aa6.76□□□□□ -1.33
TRA2B-202ENST00000342294 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
TRA2B-202ENST00000342294 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
TRA2B-202ENST00000342294 KRTAP4-9Q9BYQ8 210 aa6.75□□□□□ -1.33
TRA2B-202ENST00000342294 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
TRA2B-202ENST00000342294 CYP4F30PQ9H0H9 118 aa6.73□□□□□ -1.33
TRA2B-202ENST00000342294 NDUFC1O43677 76 aa6.72□□□□□ -1.33
TRA2B-202ENST00000342294 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
TRA2B-202ENST00000342294 H3BT86 120 aa6.69□□□□□ -1.34
TRA2B-202ENST00000342294 M0R143 59 aa6.65□□□□□ -1.34
TRA2B-202ENST00000342294 K7EP34 96 aa6.61□□□□□ -1.35
TRA2B-202ENST00000342294 R4GN34 69 aa6.61□□□□□ -1.35
TRA2B-202ENST00000342294 PCP4L1A6NKN8 68 aa6.6□□□□□ -1.35
TRA2B-202ENST00000342294 BATFQ16520 125 aa6.58□□□□□ -1.36
TRA2B-202ENST00000342294 UBL5Q9BZL1 73 aa6.57□□□□□ -1.36
TRA2B-202ENST00000342294 LOC101927531A0A1B0GV80 90 aa6.55□□□□□ -1.36
TRA2B-202ENST00000342294 P0C880 135 aa6.55□□□□□ -1.36
TRA2B-202ENST00000342294 M0QZ58 72 aa6.54□□□□□ -1.36
TRA2B-202ENST00000342294 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
TRA2B-202ENST00000342294 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
TRA2B-202ENST00000342294 LCE5AQ5TCM9 118 aa6.51□□□□□ -1.37
TRA2B-202ENST00000342294 COL5A1-AS1Q5SY13 56 aa6.49□□□□□ -1.37
TRA2B-202ENST00000342294 ACYP1P07311 99 aa6.48□□□□□ -1.37
TRA2B-202ENST00000342294 TAX1BP3O14907 124 aa6.47□□□□□ -1.37
TRA2B-202ENST00000342294 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
TRA2B-202ENST00000342294 C9orf118A6NHY6 69 aa6.46□□□□□ -1.38
TRA2B-202ENST00000342294 C20orf197Q8N268 126 aa6.46□□□□□ -1.38
TRA2B-202ENST00000342294 A0A1W2PPM0 123 aa6.43□□□□□ -1.38
TRA2B-202ENST00000342294 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
TRA2B-202ENST00000342294 KRTAP5-10Q6L8G5 202 aa6.4□□□□□ -1.38
TRA2B-202ENST00000342294 SPCS1Q9Y6A9 102 aa6.4□□□□□ -1.38
TRA2B-202ENST00000342294 KRTAP19-3Q7Z4W3 81 aa6.39□□□□□ -1.39
TRA2B-202ENST00000342294 KRTAP19-7Q3SYF9 63 aa6.37□□□□□ -1.39
TRA2B-202ENST00000342294 LCE4AQ5TA78 99 aa6.36□□□□□ -1.39
TRA2B-202ENST00000342294 HMCN1Q96RW7 5635 aa6.36□□□□□ -1.39
TRA2B-202ENST00000342294 MT4P47944 62 aa6.35□□□□□ -1.39
TRA2B-202ENST00000342294 MT1EP04732 61 aa6.33□□□□□ -1.4
TRA2B-202ENST00000342294 AHNAK2Q8IVF2 5795 aa6.32□□□□□ -1.4
TRA2B-202ENST00000342294 H0Y9P7 68 aa6.31□□□□□ -1.4
TRA2B-202ENST00000342294 ATOX1O00244 68 aa6.31□□□□□ -1.4
TRA2B-202ENST00000342294 GTF2H5Q6ZYL4 71 aa6.3□□□□□ -1.4
TRA2B-202ENST00000342294 UQCRQO14949 82 aa6.29□□□□□ -1.4
TRA2B-202ENST00000342294 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
TRA2B-202ENST00000342294 PRO0461Q9UI25 63 aa6.27□□□□□ -1.41
TRA2B-202ENST00000342294 A0A1B0GV90 55 aa6.25□□□□□ -1.41
TRA2B-202ENST00000342294 KRTAP5-7Q6L8G8 165 aa6.23□□□□□ -1.41
TRA2B-202ENST00000342294 F8W1H4 67 aa6.21□□□□□ -1.42
TRA2B-202ENST00000342294 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
TRA2B-202ENST00000342294 MT1GP13640 62 aa6.17□□□□□ -1.42
TRA2B-202ENST00000342294 KRTAP5-4Q6L8H1 288 aa6.17□□□□□ -1.42
TRA2B-202ENST00000342294 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
TRA2B-202ENST00000342294 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
TRA2B-202ENST00000342294 ETDBQ3ZM63 59 aa6.14□□□□□ -1.43
TRA2B-202ENST00000342294 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
TRA2B-202ENST00000342294 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
TRA2B-202ENST00000342294 DMAC1Q96GE9 116 aa6.08□□□□□ -1.44
TRA2B-202ENST00000342294 MT1MQ8N339 61 aa6.06□□□□□ -1.44
TRA2B-202ENST00000342294 HIST1H4AP62805 103 aaKnown RBP6.03□□□□□ -1.44
TRA2B-202ENST00000342294 KRTAP19-5Q3LI72 72 aa6.02□□□□□ -1.45
TRA2B-202ENST00000342294 MP68P56378 58 aa6□□□□□ -1.45
TRA2B-202ENST00000342294 ATP5EP2Q5VTU8 51 aa5.99□□□□□ -1.45
TRA2B-202ENST00000342294 FAM240AA0A1B0GVK7 77 aa5.98□□□□□ -1.45
TRA2B-202ENST00000342294 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
TRA2B-202ENST00000342294 J3QR89 54 aa5.96□□□□□ -1.46
TRA2B-202ENST00000342294 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.46
TRA2B-202ENST00000342294 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
TRA2B-202ENST00000342294 MT1LQ93083 61 aa5.95□□□□□ -1.46
TRA2B-202ENST00000342294 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
TRA2B-202ENST00000342294 TRAV7A0A075B6U4 112 aa5.92□□□□□ -1.46
TRA2B-202ENST00000342294 A0A0D9SG42 100 aa5.91□□□□□ -1.46
TRA2B-202ENST00000342294 K7ERU9 68 aa5.9□□□□□ -1.46
TRA2B-202ENST00000342294 KRTAP13-4Q3LI77 160 aa5.88□□□□□ -1.47
TRA2B-202ENST00000342294 H3BPC8 53 aa5.86□□□□□ -1.47
TRA2B-202ENST00000342294 LINC00643Q86TS7 51 aa5.85□□□□□ -1.47
TRA2B-202ENST00000342294 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
TRA2B-202ENST00000342294 SPTSSBQ8NFR3 76 aa5.82□□□□□ -1.48
TRA2B-202ENST00000342294 ACYP2P14621 99 aa5.79□□□□□ -1.48
TRA2B-202ENST00000342294 KRTAP5-5Q701N2 237 aaPredicted RBP5.65□□□□□ -1.5
TRA2B-202ENST00000342294 CHKB-CPT1BH3BT56 60 aa5.63□□□□□ -1.51
TRA2B-202ENST00000342294 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
TRA2B-202ENST00000342294 C10orf95Q9H7T3 257 aa5.63□□□□□ -1.51
TRA2B-202ENST00000342294 SCGB1A1P11684 91 aa5.6□□□□□ -1.51
TRA2B-202ENST00000342294 KRTAP12-4P60329 112 aa5.6□□□□□ -1.51
TRA2B-202ENST00000342294 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
TRA2B-202ENST00000342294 SMIM20Q8N5G0 67 aa5.53□□□□□ -1.52
TRA2B-202ENST00000342294 SPINT4Q6UDR6 99 aa5.52□□□□□ -1.53
TRA2B-202ENST00000342294 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
TRA2B-202ENST00000342294 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
TRA2B-202ENST00000342294 SPATA8Q6RVD6 105 aa5.45□□□□□ -1.54
TRA2B-202ENST00000342294 SERP2Q8N6R1 65 aa5.44□□□□□ -1.54
TRA2B-202ENST00000342294 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
TRA2B-202ENST00000342294 AHNAKQ09666 5890 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms