RNA–Protein interactions for RNA: ENST00000341807.8

COL22A1-202, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL22A1, Length 3,584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-202ENST00000341807 SPINT4Q6UDR6 99 aa6.8□□□□□ -1.32
COL22A1-202ENST00000341807 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
COL22A1-202ENST00000341807 LRP1Q07954 4544 aaKnown RBP6.78□□□□□ -1.32
COL22A1-202ENST00000341807 XP32Q5T750 250 aa6.78□□□□□ -1.32
COL22A1-202ENST00000341807 ROMO1P60602 79 aa6.77□□□□□ -1.33
COL22A1-202ENST00000341807 P0C880 135 aa6.74□□□□□ -1.33
COL22A1-202ENST00000341807 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
COL22A1-202ENST00000341807 APOBP04114 4563 aaKnown RBP6.73□□□□□ -1.33
COL22A1-202ENST00000341807 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.33
COL22A1-202ENST00000341807 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
COL22A1-202ENST00000341807 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
COL22A1-202ENST00000341807 KRTAP21-3Q3LHN1 58 aa6.65□□□□□ -1.34
COL22A1-202ENST00000341807 KRTAP3-2Q9BYR7 98 aa6.63□□□□□ -1.35
COL22A1-202ENST00000341807 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
COL22A1-202ENST00000341807 HSPG2P98160 4391 aa6.58□□□□□ -1.36
COL22A1-202ENST00000341807 FAT3Q8TDW7 4589 aa6.57□□□□□ -1.36
COL22A1-202ENST00000341807 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
COL22A1-202ENST00000341807 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
COL22A1-202ENST00000341807 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
COL22A1-202ENST00000341807 RYR2Q92736 4967 aa6.54□□□□□ -1.36
COL22A1-202ENST00000341807 KIAA1109Q2LD37 5005 aa6.52□□□□□ -1.37
COL22A1-202ENST00000341807 M0QZ58 72 aa6.51□□□□□ -1.37
COL22A1-202ENST00000341807 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
COL22A1-202ENST00000341807 MT1HL1P0DM35 61 aa6.49□□□□□ -1.37
COL22A1-202ENST00000341807 R4GN34 69 aa6.48□□□□□ -1.37
COL22A1-202ENST00000341807 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
COL22A1-202ENST00000341807 RYR3Q15413 4870 aa6.43□□□□□ -1.38
COL22A1-202ENST00000341807 LRP2P98164 4655 aa6.43□□□□□ -1.38
COL22A1-202ENST00000341807 RYR1P21817 5038 aa6.42□□□□□ -1.38
COL22A1-202ENST00000341807 TNXBP22105 4242 aa6.42□□□□□ -1.38
COL22A1-202ENST00000341807 J3QL48 77 aa6.39□□□□□ -1.39
COL22A1-202ENST00000341807 NDUFAF8A1L188 74 aa6.36□□□□□ -1.39
COL22A1-202ENST00000341807 LPAP08519 4548 aa6.35□□□□□ -1.39
COL22A1-202ENST00000341807 SEC61BP60468 96 aaKnown RBP6.33□□□□□ -1.4
COL22A1-202ENST00000341807 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
COL22A1-202ENST00000341807 A0A0A0MQY5 61 aa6.29□□□□□ -1.4
COL22A1-202ENST00000341807 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
COL22A1-202ENST00000341807 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
COL22A1-202ENST00000341807 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
COL22A1-202ENST00000341807 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
COL22A1-202ENST00000341807 EPPK1P58107 5090 aaKnown RBP6.13□□□□□ -1.43
COL22A1-202ENST00000341807 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
COL22A1-202ENST00000341807 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
COL22A1-202ENST00000341807 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
COL22A1-202ENST00000341807 M0R2T5 61 aa5.94□□□□□ -1.46
COL22A1-202ENST00000341807 MUC2Q02817 5179 aa5.94□□□□□ -1.46
COL22A1-202ENST00000341807 HERC2O95714 4834 aa5.93□□□□□ -1.46
COL22A1-202ENST00000341807 TNP1P09430 55 aa5.87□□□□□ -1.47
COL22A1-202ENST00000341807 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
COL22A1-202ENST00000341807 MUC17Q685J3 4493 aa5.84□□□□□ -1.47
COL22A1-202ENST00000341807 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
COL22A1-202ENST00000341807 FAT4Q6V0I7 4981 aa5.67□□□□□ -1.5
COL22A1-202ENST00000341807 HERC1Q15751 4861 aa5.67□□□□□ -1.5
COL22A1-202ENST00000341807 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
COL22A1-202ENST00000341807 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
COL22A1-202ENST00000341807 BIRC6Q9NR09 4857 aa5.55□□□□□ -1.52
COL22A1-202ENST00000341807 PCLOQ9Y6V0 5065 aa5.55□□□□□ -1.52
COL22A1-202ENST00000341807 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
COL22A1-202ENST00000341807 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
COL22A1-202ENST00000341807 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
COL22A1-202ENST00000341807 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
COL22A1-202ENST00000341807 SPRR2GQ9BYE4 73 aa5.46□□□□□ -1.54
COL22A1-202ENST00000341807 MT1HP80294 61 aa5.44□□□□□ -1.54
COL22A1-202ENST00000341807 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
COL22A1-202ENST00000341807 MT1FP04733 61 aa5.43□□□□□ -1.54
COL22A1-202ENST00000341807 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
COL22A1-202ENST00000341807 MT2AP02795 61 aa5.4□□□□□ -1.54
COL22A1-202ENST00000341807 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
COL22A1-202ENST00000341807 SPRR5A0A1B0GTR4 108 aa5.27□□□□□ -1.57
COL22A1-202ENST00000341807 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
COL22A1-202ENST00000341807 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
COL22A1-202ENST00000341807 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
COL22A1-202ENST00000341807 MT1BP07438 61 aa5.19□□□□□ -1.58
COL22A1-202ENST00000341807 MT1XP80297 61 aa5.18□□□□□ -1.58
COL22A1-202ENST00000341807 KRTAP10-5P60370 271 aa5.18□□□□□ -1.58
COL22A1-202ENST00000341807 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
COL22A1-202ENST00000341807 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
COL22A1-202ENST00000341807 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
COL22A1-202ENST00000341807 PRO2289Q9P1D8 64 aa5.14□□□□□ -1.59
COL22A1-202ENST00000341807 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
COL22A1-202ENST00000341807 USH2AO75445 5202 aa4.99□□□□□ -1.61
COL22A1-202ENST00000341807 KRTAP19-5Q3LI72 72 aa4.97□□□□□ -1.61
COL22A1-202ENST00000341807 KMT2DO14686 5537 aa4.94□□□□□ -1.62
COL22A1-202ENST00000341807 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.62
COL22A1-202ENST00000341807 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.62
COL22A1-202ENST00000341807 LCE2BO14633 110 aa4.89□□□□□ -1.63
COL22A1-202ENST00000341807 INE1O15225 51 aa4.87□□□□□ -1.63
COL22A1-202ENST00000341807 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
COL22A1-202ENST00000341807 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
COL22A1-202ENST00000341807 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
COL22A1-202ENST00000341807 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
COL22A1-202ENST00000341807 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
COL22A1-202ENST00000341807 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
COL22A1-202ENST00000341807 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
COL22A1-202ENST00000341807 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.68
COL22A1-202ENST00000341807 MT1LQ93083 61 aa4.5□□□□□ -1.69
COL22A1-202ENST00000341807 MT1EP04732 61 aa4.48□□□□□ -1.69
COL22A1-202ENST00000341807 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
COL22A1-202ENST00000341807 DSTQ03001 7570 aaKnown RBP4.44□□□□□ -1.7
COL22A1-202ENST00000341807 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms