RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 DEFB105AQ8NG35 78 aa1.88□□□□□ -2.11
CCDC66-202ENST00000341455 ACYP1P07311 99 aa1.87□□□□□ -2.11
CCDC66-202ENST00000341455 Q5W150 140 aa1.87□□□□□ -2.11
CCDC66-202ENST00000341455 SPANXA2-OT1Q8N9U9 137 aa1.87□□□□□ -2.11
CCDC66-202ENST00000341455 FLGP20930 4061 aaPredicted RBP1.86□□□□□ -2.11
CCDC66-202ENST00000341455 ATP5EP2Q5VTU8 51 aa1.86□□□□□ -2.11
CCDC66-202ENST00000341455 BRK1Q8WUW1 75 aa1.85□□□□□ -2.11
CCDC66-202ENST00000341455 A0A087WSZ3 146 aa1.85□□□□□ -2.11
CCDC66-202ENST00000341455 DSCR10P59022 87 aa1.85□□□□□ -2.11
CCDC66-202ENST00000341455 MT1HP80294 61 aa1.85□□□□□ -2.11
CCDC66-202ENST00000341455 KRTAP19-6Q3LI70 58 aa1.85□□□□□ -2.11
CCDC66-202ENST00000341455 TMEM254Q8TBM7 123 aa1.85□□□□□ -2.11
CCDC66-202ENST00000341455 NAA38Q9BRA0 125 aaKnown RBP1.85□□□□□ -2.11
CCDC66-202ENST00000341455 LPAP08519 4548 aa1.85□□□□□ -2.11
CCDC66-202ENST00000341455 MMP24-AS1A0A0U1RRL7 71 aa1.84□□□□□ -2.12
CCDC66-202ENST00000341455 J3QR89 54 aa1.84□□□□□ -2.12
CCDC66-202ENST00000341455 C14orf132Q9NPU4 83 aa1.84□□□□□ -2.12
CCDC66-202ENST00000341455 A0A0G2JQZ4 141 aa1.83□□□□□ -2.12
CCDC66-202ENST00000341455 HIST1H4AP62805 103 aaKnown RBP1.83□□□□□ -2.12
CCDC66-202ENST00000341455 IGKV3D-7A0A0C4DH55 119 aa1.83□□□□□ -2.12
CCDC66-202ENST00000341455 KRTAP4-1Q9BYQ7 146 aa1.82□□□□□ -2.12
CCDC66-202ENST00000341455 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
CCDC66-202ENST00000341455 C1orf64Q8NEQ6 169 aa1.82□□□□□ -2.12
CCDC66-202ENST00000341455 RETNLBQ9BQ08 111 aa1.82□□□□□ -2.12
CCDC66-202ENST00000341455 IGKV4-1P06312 121 aa1.81□□□□□ -2.12
CCDC66-202ENST00000341455 FAM236AA0A1B0GUQ0 79 aa1.81□□□□□ -2.12
CCDC66-202ENST00000341455 FAM236BA0A1B0GV22 79 aa1.81□□□□□ -2.12
CCDC66-202ENST00000341455 WFDC13Q8IUB5 93 aa1.81□□□□□ -2.12
CCDC66-202ENST00000341455 KRTAP9-6A8MVA2 160 aa1.8□□□□□ -2.12
CCDC66-202ENST00000341455 NREPQ16612 68 aa1.8□□□□□ -2.12
CCDC66-202ENST00000341455 KRTAP10-5P60370 271 aa1.8□□□□□ -2.12
CCDC66-202ENST00000341455 UBL5Q9BZL1 73 aa1.8□□□□□ -2.12
CCDC66-202ENST00000341455 NDUFB1O75438 58 aa1.8□□□□□ -2.12
CCDC66-202ENST00000341455 HRES1P13985 223 aa1.8□□□□□ -2.12
CCDC66-202ENST00000341455 ETDBQ3ZM63 59 aa1.8□□□□□ -2.12
CCDC66-202ENST00000341455 LINC00643Q86TS7 51 aa1.8□□□□□ -2.12
CCDC66-202ENST00000341455 ZCCHC13Q8WW36 166 aaKnown RBP1.8□□□□□ -2.12
CCDC66-202ENST00000341455 MRPL34Q9BQ48 92 aaKnown RBP1.79□□□□□ -2.12
CCDC66-202ENST00000341455 K7EQZ3 153 aa1.79□□□□□ -2.12
CCDC66-202ENST00000341455 TP53AIP1Q9HCN2 124 aa1.79□□□□□ -2.12
CCDC66-202ENST00000341455 H3BPC8 53 aa1.78□□□□□ -2.12
CCDC66-202ENST00000341455 C7orf65Q6ZTY9 151 aa1.78□□□□□ -2.12
CCDC66-202ENST00000341455 hDV103S1A0JD37 113 aa1.77□□□□□ -2.13
CCDC66-202ENST00000341455 HCG22E2RYF7 251 aa1.77□□□□□ -2.13
CCDC66-202ENST00000341455 A0A1B0GU33 70 aa1.77□□□□□ -2.13
CCDC66-202ENST00000341455 UQCRQO14949 82 aa1.77□□□□□ -2.13
CCDC66-202ENST00000341455 PCOTHQ58A44 107 aa1.77□□□□□ -2.13
CCDC66-202ENST00000341455 TRAV7A0A075B6U4 112 aa1.76□□□□□ -2.13
CCDC66-202ENST00000341455 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
CCDC66-202ENST00000341455 ATP11AUNQ6ZP68 121 aa1.76□□□□□ -2.13
CCDC66-202ENST00000341455 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
CCDC66-202ENST00000341455 C9orf92A6NGG3 77 aa1.76□□□□□ -2.13
CCDC66-202ENST00000341455 KRTAP25-1Q3LHN0 102 aa1.76□□□□□ -2.13
CCDC66-202ENST00000341455 CASC2Q6XLA1 102 aa1.75□□□□□ -2.13
CCDC66-202ENST00000341455 CCDC179H3BU77 68 aa1.75□□□□□ -2.13
CCDC66-202ENST00000341455 NEBP20929 6669 aa1.75□□□□□ -2.13
CCDC66-202ENST00000341455 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
CCDC66-202ENST00000341455 USH2AO75445 5202 aa1.74□□□□□ -2.13
CCDC66-202ENST00000341455 ATOX1O00244 68 aa1.73□□□□□ -2.13
CCDC66-202ENST00000341455 KRTAP4-3Q9BYR4 195 aa1.73□□□□□ -2.13
CCDC66-202ENST00000341455 LOC101927531A0A1B0GV80 90 aa1.73□□□□□ -2.13
CCDC66-202ENST00000341455 R4GN34 69 aa1.72□□□□□ -2.13
CCDC66-202ENST00000341455 ROMO1P60602 79 aa1.72□□□□□ -2.13
CCDC66-202ENST00000341455 SPINT4Q6UDR6 99 aa1.72□□□□□ -2.13
CCDC66-202ENST00000341455 SPINK7P58062 85 aa1.71□□□□□ -2.14
CCDC66-202ENST00000341455 TMEM258P61165 79 aa1.71□□□□□ -2.14
CCDC66-202ENST00000341455 TRAV22A0A0B4J277 110 aa1.71□□□□□ -2.14
CCDC66-202ENST00000341455 Q8N9L7 120 aa1.71□□□□□ -2.14
CCDC66-202ENST00000341455 COX6B2Q6YFQ2 88 aa1.7□□□□□ -2.14
CCDC66-202ENST00000341455 CYP4F30PQ9H0H9 118 aa1.7□□□□□ -2.14
CCDC66-202ENST00000341455 H0YAA0 97 aa1.69□□□□□ -2.14
CCDC66-202ENST00000341455 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
CCDC66-202ENST00000341455 A6NN06 94 aa1.69□□□□□ -2.14
CCDC66-202ENST00000341455 MT-ATP8P03928 68 aa1.68□□□□□ -2.14
CCDC66-202ENST00000341455 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
CCDC66-202ENST00000341455 H0Y9P7 68 aa1.66□□□□□ -2.14
CCDC66-202ENST00000341455 DMAC1Q96GE9 116 aa1.66□□□□□ -2.14
CCDC66-202ENST00000341455 FCGBPQ9Y6R7 5405 aaPredicted RBP1.66□□□□□ -2.14
CCDC66-202ENST00000341455 A0A087WVE0 104 aa1.66□□□□□ -2.14
CCDC66-202ENST00000341455 MT2AP02795 61 aa1.66□□□□□ -2.14
CCDC66-202ENST00000341455 KLKP1Q107X0 134 aa1.66□□□□□ -2.14
CCDC66-202ENST00000341455 SERP1Q9Y6X1 66 aa1.65□□□□□ -2.14
CCDC66-202ENST00000341455 SERP2Q8N6R1 65 aa1.65□□□□□ -2.15
CCDC66-202ENST00000341455 LCE1FQ5T754 118 aa1.64□□□□□ -2.15
CCDC66-202ENST00000341455 CRIPTQ9P021 101 aa1.64□□□□□ -2.15
CCDC66-202ENST00000341455 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
CCDC66-202ENST00000341455 P0C880 135 aa1.64□□□□□ -2.15
CCDC66-202ENST00000341455 MT1FP04733 61 aa1.63□□□□□ -2.15
CCDC66-202ENST00000341455 NDUFC1O43677 76 aa1.63□□□□□ -2.15
CCDC66-202ENST00000341455 KRTAP19-8Q3LI54 63 aa1.63□□□□□ -2.15
CCDC66-202ENST00000341455 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
CCDC66-202ENST00000341455 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
CCDC66-202ENST00000341455 S4R3F8 94 aa1.62□□□□□ -2.15
CCDC66-202ENST00000341455 COX7CP15954 63 aa1.62□□□□□ -2.15
CCDC66-202ENST00000341455 KRTAP10-12P60413 245 aa1.61□□□□□ -2.15
CCDC66-202ENST00000341455 MIR22HGQ0VDD5 57 aa1.61□□□□□ -2.15
CCDC66-202ENST00000341455 LINC00208Q96KT6 92 aa1.6□□□□□ -2.15
CCDC66-202ENST00000341455 ATP5EP56381 51 aaPredicted RBP1.59□□□□□ -2.16
CCDC66-202ENST00000341455 CSAG1Q6PB30 78 aa1.59□□□□□ -2.16
CCDC66-202ENST00000341455 H7BZZ5 65 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms