RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 CMYA5Q8N3K9 4069 aa5.73□□□□□ -1.49
TRAK1-202ENST00000341421 DNAH11Q96DT5 4516 aa5.71□□□□□ -1.49
TRAK1-202ENST00000341421 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
TRAK1-202ENST00000341421 KRTAP3-3Q9BYR6 98 aa5.7□□□□□ -1.5
TRAK1-202ENST00000341421 DYNC2H1Q8NCM8 4307 aaKnown RBP5.69□□□□□ -1.5
TRAK1-202ENST00000341421 MT1HL1P0DM35 61 aa5.69□□□□□ -1.5
TRAK1-202ENST00000341421 DNAH8Q96JB1 4490 aa5.68□□□□□ -1.5
TRAK1-202ENST00000341421 DNAH2Q9P225 4427 aa5.66□□□□□ -1.5
TRAK1-202ENST00000341421 DNAH5Q8TE73 4624 aa5.65□□□□□ -1.51
TRAK1-202ENST00000341421 PRKDCP78527 4128 aaKnown RBP5.61□□□□□ -1.51
TRAK1-202ENST00000341421 DNHD1Q96M86 4753 aa5.6□□□□□ -1.51
TRAK1-202ENST00000341421 LRP1BQ9NZR2 4599 aa5.57□□□□□ -1.52
TRAK1-202ENST00000341421 KMT2AQ03164 3969 aa5.55□□□□□ -1.52
TRAK1-202ENST00000341421 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
TRAK1-202ENST00000341421 DNAH6Q9C0G6 4158 aa5.5□□□□□ -1.53
TRAK1-202ENST00000341421 HECTD4Q9Y4D8 3996 aa5.5□□□□□ -1.53
TRAK1-202ENST00000341421 DYNC1H1Q14204 4646 aaKnown RBP5.5□□□□□ -1.53
TRAK1-202ENST00000341421 LYSTQ99698 3801 aa5.49□□□□□ -1.53
TRAK1-202ENST00000341421 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
TRAK1-202ENST00000341421 DNAH7Q8WXX0 4024 aa5.47□□□□□ -1.53
TRAK1-202ENST00000341421 SACSQ9NZJ4 4579 aa5.46□□□□□ -1.53
TRAK1-202ENST00000341421 VPS13BQ7Z7G8 4022 aa5.42□□□□□ -1.54
TRAK1-202ENST00000341421 FAT1Q14517 4588 aa5.41□□□□□ -1.54
TRAK1-202ENST00000341421 FAT2Q9NYQ8 4349 aa5.4□□□□□ -1.54
TRAK1-202ENST00000341421 PRO2289Q9P1D8 64 aa5.35□□□□□ -1.55
TRAK1-202ENST00000341421 KRTAP4-5Q9BYR2 181 aa5.33□□□□□ -1.56
TRAK1-202ENST00000341421 HYDINQ4G0P3 5121 aa5.21□□□□□ -1.58
TRAK1-202ENST00000341421 APOBP04114 4563 aaKnown RBP5.21□□□□□ -1.58
TRAK1-202ENST00000341421 LORP23490 312 aaPredicted RBP5.19□□□□□ -1.58
TRAK1-202ENST00000341421 PKD1P98161 4303 aa5.16□□□□□ -1.58
TRAK1-202ENST00000341421 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
TRAK1-202ENST00000341421 KRTAP4-1Q9BYQ7 146 aa5.12□□□□□ -1.59
TRAK1-202ENST00000341421 RYR2Q92736 4967 aa5.12□□□□□ -1.59
TRAK1-202ENST00000341421 FAT3Q8TDW7 4589 aa5.11□□□□□ -1.59
TRAK1-202ENST00000341421 RYR1P21817 5038 aa5.11□□□□□ -1.59
TRAK1-202ENST00000341421 PKHD1P08F94 4074 aa5.1□□□□□ -1.59
TRAK1-202ENST00000341421 INE1O15225 51 aa5.08□□□□□ -1.6
TRAK1-202ENST00000341421 LRP1Q07954 4544 aaKnown RBP5.08□□□□□ -1.6
TRAK1-202ENST00000341421 KIAA1109Q2LD37 5005 aa5.07□□□□□ -1.6
TRAK1-202ENST00000341421 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
TRAK1-202ENST00000341421 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
TRAK1-202ENST00000341421 RYR3Q15413 4870 aa5.02□□□□□ -1.61
TRAK1-202ENST00000341421 PKHD1L1Q86WI1 4243 aa5.02□□□□□ -1.61
TRAK1-202ENST00000341421 KMT2CQ8NEZ4 4911 aaKnown RBP4.99□□□□□ -1.61
TRAK1-202ENST00000341421 HSPG2P98160 4391 aa4.95□□□□□ -1.62
TRAK1-202ENST00000341421 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.63
TRAK1-202ENST00000341421 KRTAP10-12P60413 245 aa4.88□□□□□ -1.63
TRAK1-202ENST00000341421 TNXBP22105 4242 aa4.87□□□□□ -1.63
TRAK1-202ENST00000341421 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
TRAK1-202ENST00000341421 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
TRAK1-202ENST00000341421 LRP2P98164 4655 aa4.85□□□□□ -1.63
TRAK1-202ENST00000341421 MT1HP80294 61 aa4.81□□□□□ -1.64
TRAK1-202ENST00000341421 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
TRAK1-202ENST00000341421 MT2AP02795 61 aa4.77□□□□□ -1.65
TRAK1-202ENST00000341421 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
TRAK1-202ENST00000341421 EPPK1P58107 5090 aaKnown RBP4.72□□□□□ -1.65
TRAK1-202ENST00000341421 HERC2O95714 4834 aa4.71□□□□□ -1.66
TRAK1-202ENST00000341421 MT1FP04733 61 aa4.7□□□□□ -1.66
TRAK1-202ENST00000341421 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
TRAK1-202ENST00000341421 KRTAP19-1Q8IUB9 90 aa4.69□□□□□ -1.66
TRAK1-202ENST00000341421 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
TRAK1-202ENST00000341421 LPAP08519 4548 aa4.63□□□□□ -1.67
TRAK1-202ENST00000341421 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
TRAK1-202ENST00000341421 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
TRAK1-202ENST00000341421 BIRC6Q9NR09 4857 aa4.58□□□□□ -1.68
TRAK1-202ENST00000341421 ABCA13Q86UQ4 5058 aa4.54□□□□□ -1.68
TRAK1-202ENST00000341421 HERC1Q15751 4861 aa4.52□□□□□ -1.69
TRAK1-202ENST00000341421 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
TRAK1-202ENST00000341421 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
TRAK1-202ENST00000341421 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
TRAK1-202ENST00000341421 MT1BP07438 61 aa4.47□□□□□ -1.69
TRAK1-202ENST00000341421 MT1XP80297 61 aa4.46□□□□□ -1.69
TRAK1-202ENST00000341421 KRTAP10-5P60370 271 aa4.45□□□□□ -1.7
TRAK1-202ENST00000341421 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
TRAK1-202ENST00000341421 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
TRAK1-202ENST00000341421 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
TRAK1-202ENST00000341421 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
TRAK1-202ENST00000341421 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
TRAK1-202ENST00000341421 PCLOQ9Y6V0 5065 aa4.31□□□□□ -1.72
TRAK1-202ENST00000341421 MUC2Q02817 5179 aa4.21□□□□□ -1.73
TRAK1-202ENST00000341421 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
TRAK1-202ENST00000341421 RNF213Q63HN8 5207 aa4.17□□□□□ -1.74
TRAK1-202ENST00000341421 FAT4Q6V0I7 4981 aa4.14□□□□□ -1.75
TRAK1-202ENST00000341421 LCE2BO14633 110 aa4.14□□□□□ -1.75
TRAK1-202ENST00000341421 LCE2DQ5TA82 110 aaPredicted RBP4.12□□□□□ -1.75
TRAK1-202ENST00000341421 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
TRAK1-202ENST00000341421 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
TRAK1-202ENST00000341421 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.75
TRAK1-202ENST00000341421 KRTAP4-8Q9BYQ9 185 aa4.09□□□□□ -1.75
TRAK1-202ENST00000341421 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
TRAK1-202ENST00000341421 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
TRAK1-202ENST00000341421 LCE2AQ5TA79 106 aaPredicted RBP3.98□□□□□ -1.77
TRAK1-202ENST00000341421 MT1LQ93083 61 aa3.96□□□□□ -1.78
TRAK1-202ENST00000341421 MT1EP04732 61 aa3.95□□□□□ -1.78
TRAK1-202ENST00000341421 MT1GP13640 62 aa3.93□□□□□ -1.78
TRAK1-202ENST00000341421 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
TRAK1-202ENST00000341421 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
TRAK1-202ENST00000341421 KRTAP2-1Q9BYU5 128 aa3.91□□□□□ -1.78
TRAK1-202ENST00000341421 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
TRAK1-202ENST00000341421 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms