RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 LRP1BQ9NZR2 4599 aa7.1□□□□□ -1.27
RET-201ENST00000340058 KRTAP10-6P60371 365 aaPredicted RBP7.08□□□□□ -1.28
RET-201ENST00000340058 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
RET-201ENST00000340058 KMT2AQ03164 3969 aa7.07□□□□□ -1.28
RET-201ENST00000340058 RYR1P21817 5038 aa7.07□□□□□ -1.28
RET-201ENST00000340058 DYNC1H1Q14204 4646 aaKnown RBP7.06□□□□□ -1.28
RET-201ENST00000340058 VPS13DQ5THJ4 4388 aa7.05□□□□□ -1.28
RET-201ENST00000340058 MYCBP2O75592 4640 aa7.05□□□□□ -1.28
RET-201ENST00000340058 KIAA1109Q2LD37 5005 aa7.04□□□□□ -1.28
RET-201ENST00000340058 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
RET-201ENST00000340058 A0A0A0MQY5 61 aa6.99□□□□□ -1.29
RET-201ENST00000340058 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
RET-201ENST00000340058 DNAH17Q9UFH2 4485 aa6.94□□□□□ -1.3
RET-201ENST00000340058 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
RET-201ENST00000340058 KRTAP3-2Q9BYR7 98 aa6.9□□□□□ -1.31
RET-201ENST00000340058 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
RET-201ENST00000340058 SACSQ9NZJ4 4579 aa6.85□□□□□ -1.31
RET-201ENST00000340058 PP632Q6XCG6 107 aa6.83□□□□□ -1.32
RET-201ENST00000340058 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
RET-201ENST00000340058 RYR3Q15413 4870 aa6.82□□□□□ -1.32
RET-201ENST00000340058 LRP1Q07954 4544 aaKnown RBP6.79□□□□□ -1.32
RET-201ENST00000340058 ALMS1Q8TCU4 4167 aa6.79□□□□□ -1.32
RET-201ENST00000340058 CMYA5Q8N3K9 4069 aa6.79□□□□□ -1.32
RET-201ENST00000340058 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
RET-201ENST00000340058 HYDINQ4G0P3 5121 aa6.74□□□□□ -1.33
RET-201ENST00000340058 DNAH6Q9C0G6 4158 aa6.74□□□□□ -1.33
RET-201ENST00000340058 DNAH7Q8WXX0 4024 aa6.73□□□□□ -1.33
RET-201ENST00000340058 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
RET-201ENST00000340058 FRAS1Q86XX4 4008 aa6.7□□□□□ -1.34
RET-201ENST00000340058 APOBP04114 4563 aaKnown RBP6.7□□□□□ -1.34
RET-201ENST00000340058 DYNC2H1Q8NCM8 4307 aaKnown RBP6.69□□□□□ -1.34
RET-201ENST00000340058 KRTAP17-1Q9BYP8 105 aa6.68□□□□□ -1.34
RET-201ENST00000340058 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.34
RET-201ENST00000340058 KRTAP4-1Q9BYQ7 146 aa6.65□□□□□ -1.35
RET-201ENST00000340058 FAT2Q9NYQ8 4349 aa6.65□□□□□ -1.35
RET-201ENST00000340058 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
RET-201ENST00000340058 LRP2P98164 4655 aa6.52□□□□□ -1.37
RET-201ENST00000340058 KMT2CQ8NEZ4 4911 aaKnown RBP6.52□□□□□ -1.37
RET-201ENST00000340058 HECTD4Q9Y4D8 3996 aa6.48□□□□□ -1.37
RET-201ENST00000340058 HERC2O95714 4834 aa6.46□□□□□ -1.38
RET-201ENST00000340058 RYR2Q92736 4967 aa6.46□□□□□ -1.38
RET-201ENST00000340058 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
RET-201ENST00000340058 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
RET-201ENST00000340058 PCLOQ9Y6V0 5065 aa6.22□□□□□ -1.41
RET-201ENST00000340058 HSPG2P98160 4391 aa6.21□□□□□ -1.42
RET-201ENST00000340058 MT1HP80294 61 aa6.19□□□□□ -1.42
RET-201ENST00000340058 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
RET-201ENST00000340058 LPAP08519 4548 aa6.17□□□□□ -1.42
RET-201ENST00000340058 EPPK1P58107 5090 aaKnown RBP6.16□□□□□ -1.42
RET-201ENST00000340058 MT2AP02795 61 aa6.13□□□□□ -1.43
RET-201ENST00000340058 PKD1P98161 4303 aa6.12□□□□□ -1.43
RET-201ENST00000340058 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
RET-201ENST00000340058 MT1FP04733 61 aa6.09□□□□□ -1.43
RET-201ENST00000340058 CRCT1Q9UGL9 99 aa6.08□□□□□ -1.44
RET-201ENST00000340058 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
RET-201ENST00000340058 BIRC6Q9NR09 4857 aa6.03□□□□□ -1.44
RET-201ENST00000340058 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
RET-201ENST00000340058 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
RET-201ENST00000340058 HERC1Q15751 4861 aa5.9□□□□□ -1.47
RET-201ENST00000340058 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
RET-201ENST00000340058 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
RET-201ENST00000340058 MUC2Q02817 5179 aa5.86□□□□□ -1.47
RET-201ENST00000340058 PKHD1L1Q86WI1 4243 aa5.79□□□□□ -1.48
RET-201ENST00000340058 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
RET-201ENST00000340058 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
RET-201ENST00000340058 LCE2CQ5TA81 110 aa5.77□□□□□ -1.49
RET-201ENST00000340058 TNXBP22105 4242 aa5.75□□□□□ -1.49
RET-201ENST00000340058 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
RET-201ENST00000340058 KRTAP8-1Q8IUC2 63 aa5.74□□□□□ -1.49
RET-201ENST00000340058 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
RET-201ENST00000340058 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
RET-201ENST00000340058 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
RET-201ENST00000340058 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
RET-201ENST00000340058 MUC17Q685J3 4493 aa5.63□□□□□ -1.51
RET-201ENST00000340058 MT1BP07438 61 aa5.6□□□□□ -1.51
RET-201ENST00000340058 MT1XP80297 61 aa5.57□□□□□ -1.52
RET-201ENST00000340058 KRTAP19-8Q3LI54 63 aa5.57□□□□□ -1.52
RET-201ENST00000340058 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
RET-201ENST00000340058 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
RET-201ENST00000340058 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
RET-201ENST00000340058 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
RET-201ENST00000340058 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
RET-201ENST00000340058 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
RET-201ENST00000340058 FLGP20930 4061 aaPredicted RBP5.46□□□□□ -1.53
RET-201ENST00000340058 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
RET-201ENST00000340058 HMCN2Q8NDA2 5059 aa5.42□□□□□ -1.54
RET-201ENST00000340058 INE1O15225 51 aa5.42□□□□□ -1.54
RET-201ENST00000340058 LCE2BO14633 110 aa5.39□□□□□ -1.55
RET-201ENST00000340058 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
RET-201ENST00000340058 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
RET-201ENST00000340058 USH2AO75445 5202 aa5.18□□□□□ -1.58
RET-201ENST00000340058 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
RET-201ENST00000340058 MT1GP13640 62 aa5.15□□□□□ -1.59
RET-201ENST00000340058 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
RET-201ENST00000340058 FCGBPQ9Y6R7 5405 aaPredicted RBP5.05□□□□□ -1.6
RET-201ENST00000340058 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
RET-201ENST00000340058 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
RET-201ENST00000340058 SPRR2EP22531 72 aa5□□□□□ -1.61
RET-201ENST00000340058 SPRR2BP35325 72 aa5□□□□□ -1.61
RET-201ENST00000340058 SPRR2AP35326 72 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms