RNA–Protein interactions for RNA: ENST00000339566.7

STAMBP-201, Transcript of STAM binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene STAMBP, Length 6,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-201ENST00000339566 LYSTQ99698 3801 aa3.64□□□□□ -1.83
STAMBP-201ENST00000339566 LRP1BQ9NZR2 4599 aa3.63□□□□□ -1.83
STAMBP-201ENST00000339566 STARD9Q9P2P6 4700 aa3.62□□□□□ -1.83
STAMBP-201ENST00000339566 LORP23490 312 aaPredicted RBP3.62□□□□□ -1.83
STAMBP-201ENST00000339566 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
STAMBP-201ENST00000339566 DNAH1Q9P2D7 4330 aa3.6□□□□□ -1.83
STAMBP-201ENST00000339566 MT1HL1P0DM35 61 aa3.58□□□□□ -1.84
STAMBP-201ENST00000339566 PRKDCP78527 4128 aaKnown RBP3.58□□□□□ -1.84
STAMBP-201ENST00000339566 DNAH8Q96JB1 4490 aa3.58□□□□□ -1.84
STAMBP-201ENST00000339566 VPS13DQ5THJ4 4388 aa3.56□□□□□ -1.84
STAMBP-201ENST00000339566 FAT1Q14517 4588 aa3.55□□□□□ -1.84
STAMBP-201ENST00000339566 DNAH5Q8TE73 4624 aa3.54□□□□□ -1.84
STAMBP-201ENST00000339566 DNAH2Q9P225 4427 aa3.52□□□□□ -1.85
STAMBP-201ENST00000339566 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
STAMBP-201ENST00000339566 KRTAP23-1A1A580 65 aa3.51□□□□□ -1.85
STAMBP-201ENST00000339566 KMT2AQ03164 3969 aa3.51□□□□□ -1.85
STAMBP-201ENST00000339566 ALMS1Q8TCU4 4167 aa3.51□□□□□ -1.85
STAMBP-201ENST00000339566 DNAH3Q8TD57 4116 aa3.51□□□□□ -1.85
STAMBP-201ENST00000339566 MYCBP2O75592 4640 aa3.5□□□□□ -1.85
STAMBP-201ENST00000339566 DNAH7Q8WXX0 4024 aa3.5□□□□□ -1.85
STAMBP-201ENST00000339566 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
STAMBP-201ENST00000339566 KIAA1109Q2LD37 5005 aa3.47□□□□□ -1.85
STAMBP-201ENST00000339566 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
STAMBP-201ENST00000339566 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
STAMBP-201ENST00000339566 DYNC1H1Q14204 4646 aaKnown RBP3.43□□□□□ -1.86
STAMBP-201ENST00000339566 DNAH6Q9C0G6 4158 aa3.43□□□□□ -1.86
STAMBP-201ENST00000339566 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
STAMBP-201ENST00000339566 FRAS1Q86XX4 4008 aa3.41□□□□□ -1.86
STAMBP-201ENST00000339566 HECTD4Q9Y4D8 3996 aa3.41□□□□□ -1.86
STAMBP-201ENST00000339566 CMYA5Q8N3K9 4069 aa3.4□□□□□ -1.87
STAMBP-201ENST00000339566 RYR1P21817 5038 aa3.39□□□□□ -1.87
STAMBP-201ENST00000339566 HYDINQ4G0P3 5121 aa3.38□□□□□ -1.87
STAMBP-201ENST00000339566 VPS13BQ7Z7G8 4022 aa3.38□□□□□ -1.87
STAMBP-201ENST00000339566 LRP1Q07954 4544 aaKnown RBP3.36□□□□□ -1.87
STAMBP-201ENST00000339566 DYNC2H1Q8NCM8 4307 aaKnown RBP3.35□□□□□ -1.87
STAMBP-201ENST00000339566 KRTAP4-5Q9BYR2 181 aa3.34□□□□□ -1.87
STAMBP-201ENST00000339566 APOBP04114 4563 aaKnown RBP3.34□□□□□ -1.87
STAMBP-201ENST00000339566 PKHD1P08F94 4074 aa3.33□□□□□ -1.88
STAMBP-201ENST00000339566 FAT3Q8TDW7 4589 aa3.33□□□□□ -1.88
STAMBP-201ENST00000339566 SACSQ9NZJ4 4579 aa3.3□□□□□ -1.88
STAMBP-201ENST00000339566 KRTAP4-1Q9BYQ7 146 aa3.3□□□□□ -1.88
STAMBP-201ENST00000339566 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
STAMBP-201ENST00000339566 RYR3Q15413 4870 aa3.28□□□□□ -1.88
STAMBP-201ENST00000339566 KMT2CQ8NEZ4 4911 aaKnown RBP3.28□□□□□ -1.88
STAMBP-201ENST00000339566 LRP2P98164 4655 aa3.26□□□□□ -1.89
STAMBP-201ENST00000339566 FAT2Q9NYQ8 4349 aa3.22□□□□□ -1.89
STAMBP-201ENST00000339566 RYR2Q92736 4967 aa3.21□□□□□ -1.9
STAMBP-201ENST00000339566 PKD1P98161 4303 aa3.19□□□□□ -1.9
STAMBP-201ENST00000339566 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
STAMBP-201ENST00000339566 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
STAMBP-201ENST00000339566 SPRR2GQ9BYE4 73 aa3.17□□□□□ -1.9
STAMBP-201ENST00000339566 HSPG2P98160 4391 aa3.14□□□□□ -1.91
STAMBP-201ENST00000339566 KRTAP17-1Q9BYP8 105 aa3.13□□□□□ -1.91
STAMBP-201ENST00000339566 SPRR2EP22531 72 aa3.13□□□□□ -1.91
STAMBP-201ENST00000339566 SPRR2BP35325 72 aa3.13□□□□□ -1.91
STAMBP-201ENST00000339566 SPRR2AP35326 72 aa3.13□□□□□ -1.91
STAMBP-201ENST00000339566 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
STAMBP-201ENST00000339566 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
STAMBP-201ENST00000339566 EPPK1P58107 5090 aaKnown RBP3.11□□□□□ -1.91
STAMBP-201ENST00000339566 MT2AP02795 61 aa3.1□□□□□ -1.91
STAMBP-201ENST00000339566 HERC2O95714 4834 aa3.08□□□□□ -1.92
STAMBP-201ENST00000339566 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
STAMBP-201ENST00000339566 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
STAMBP-201ENST00000339566 MT1FP04733 61 aa3.06□□□□□ -1.92
STAMBP-201ENST00000339566 ABCA13Q86UQ4 5058 aa3.06□□□□□ -1.92
STAMBP-201ENST00000339566 SPRR2DP22532 72 aa3.05□□□□□ -1.92
STAMBP-201ENST00000339566 KRTAP19-1Q8IUB9 90 aa3.05□□□□□ -1.92
STAMBP-201ENST00000339566 MT1HP80294 61 aa3.04□□□□□ -1.92
STAMBP-201ENST00000339566 MUC2Q02817 5179 aa3.04□□□□□ -1.92
STAMBP-201ENST00000339566 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
STAMBP-201ENST00000339566 RNF213Q63HN8 5207 aa3□□□□□ -1.93
STAMBP-201ENST00000339566 PKHD1L1Q86WI1 4243 aa2.96□□□□□ -1.94
STAMBP-201ENST00000339566 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
STAMBP-201ENST00000339566 LPAP08519 4548 aa2.95□□□□□ -1.94
STAMBP-201ENST00000339566 PCLOQ9Y6V0 5065 aa2.94□□□□□ -1.94
STAMBP-201ENST00000339566 MT1XP80297 61 aa2.93□□□□□ -1.94
STAMBP-201ENST00000339566 KRTAP19-8Q3LI54 63 aa2.93□□□□□ -1.94
STAMBP-201ENST00000339566 TNXBP22105 4242 aa2.91□□□□□ -1.94
STAMBP-201ENST00000339566 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
STAMBP-201ENST00000339566 KRTAP12-4P60329 112 aa2.9□□□□□ -1.94
STAMBP-201ENST00000339566 KRTAP9-2Q9BYQ4 174 aa2.9□□□□□ -1.95
STAMBP-201ENST00000339566 HERC1Q15751 4861 aa2.89□□□□□ -1.95
STAMBP-201ENST00000339566 LCE2BO14633 110 aa2.89□□□□□ -1.95
STAMBP-201ENST00000339566 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
STAMBP-201ENST00000339566 MUC17Q685J3 4493 aa2.89□□□□□ -1.95
STAMBP-201ENST00000339566 MT1BP07438 61 aa2.88□□□□□ -1.95
STAMBP-201ENST00000339566 KRTAP19-2Q3LHN2 52 aa2.87□□□□□ -1.95
STAMBP-201ENST00000339566 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
STAMBP-201ENST00000339566 LCE2CQ5TA81 110 aa2.83□□□□□ -1.96
STAMBP-201ENST00000339566 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
STAMBP-201ENST00000339566 KRTAP4-8A0A0G2JLE6 195 aa2.82□□□□□ -1.96
STAMBP-201ENST00000339566 KRTAP4-8Q9BYQ9 185 aa2.82□□□□□ -1.96
STAMBP-201ENST00000339566 LCE2DQ5TA82 110 aaPredicted RBP2.8□□□□□ -1.96
STAMBP-201ENST00000339566 KRTAP9-8Q9BYQ0 159 aa2.8□□□□□ -1.96
STAMBP-201ENST00000339566 BIRC6Q9NR09 4857 aa2.78□□□□□ -1.96
STAMBP-201ENST00000339566 LCE3BQ5TA77 95 aa2.77□□□□□ -1.97
STAMBP-201ENST00000339566 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
STAMBP-201ENST00000339566 MT1GP13640 62 aa2.76□□□□□ -1.97
STAMBP-201ENST00000339566 HMCN2Q8NDA2 5059 aa2.76□□□□□ -1.97
STAMBP-201ENST00000339566 FLGP20930 4061 aaPredicted RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 205.7 ms