RNA–Protein interactions for RNA: ENST00000339365.2

SEC24C-201, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC24C, Length 4,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-201ENST00000339365 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
SEC24C-201ENST00000339365 FAT2Q9NYQ8 4349 aa5.04□□□□□ -1.6
SEC24C-201ENST00000339365 A6NN06 94 aa5.04□□□□□ -1.6
SEC24C-201ENST00000339365 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
SEC24C-201ENST00000339365 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
SEC24C-201ENST00000339365 DYNC2H1Q8NCM8 4307 aaKnown RBP5.03□□□□□ -1.6
SEC24C-201ENST00000339365 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
SEC24C-201ENST00000339365 DNAH3Q8TD57 4116 aa5.01□□□□□ -1.61
SEC24C-201ENST00000339365 RYR2Q92736 4967 aa4.99□□□□□ -1.61
SEC24C-201ENST00000339365 DNAH2Q9P225 4427 aa4.99□□□□□ -1.61
SEC24C-201ENST00000339365 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
SEC24C-201ENST00000339365 SACSQ9NZJ4 4579 aa4.96□□□□□ -1.62
SEC24C-201ENST00000339365 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
SEC24C-201ENST00000339365 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
SEC24C-201ENST00000339365 HERC2O95714 4834 aa4.91□□□□□ -1.62
SEC24C-201ENST00000339365 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
SEC24C-201ENST00000339365 CMYA5Q8N3K9 4069 aa4.89□□□□□ -1.63
SEC24C-201ENST00000339365 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
SEC24C-201ENST00000339365 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
SEC24C-201ENST00000339365 MT1HP80294 61 aa4.87□□□□□ -1.63
SEC24C-201ENST00000339365 KRTAP12-2P59991 146 aa4.86□□□□□ -1.63
SEC24C-201ENST00000339365 DNAH6Q9C0G6 4158 aa4.86□□□□□ -1.63
SEC24C-201ENST00000339365 APOBP04114 4563 aaKnown RBP4.85□□□□□ -1.63
SEC24C-201ENST00000339365 LYSTQ99698 3801 aa4.82□□□□□ -1.64
SEC24C-201ENST00000339365 KRTAP13-4Q3LI77 160 aa4.82□□□□□ -1.64
SEC24C-201ENST00000339365 C10orf95Q9H7T3 257 aa4.79□□□□□ -1.64
SEC24C-201ENST00000339365 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
SEC24C-201ENST00000339365 HYDINQ4G0P3 5121 aa4.78□□□□□ -1.64
SEC24C-201ENST00000339365 KMT2CQ8NEZ4 4911 aaKnown RBP4.78□□□□□ -1.64
SEC24C-201ENST00000339365 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
SEC24C-201ENST00000339365 DNAH8Q96JB1 4490 aa4.76□□□□□ -1.65
SEC24C-201ENST00000339365 DNAH7Q8WXX0 4024 aa4.75□□□□□ -1.65
SEC24C-201ENST00000339365 MT2AP02795 61 aa4.72□□□□□ -1.65
SEC24C-201ENST00000339365 LRP1Q07954 4544 aaKnown RBP4.71□□□□□ -1.65
SEC24C-201ENST00000339365 HSPG2P98160 4391 aa4.68□□□□□ -1.66
SEC24C-201ENST00000339365 MYCBP2O75592 4640 aa4.66□□□□□ -1.66
SEC24C-201ENST00000339365 A0A0A0MQY5 61 aa4.65□□□□□ -1.66
SEC24C-201ENST00000339365 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.67
SEC24C-201ENST00000339365 LORP23490 312 aaPredicted RBP4.65□□□□□ -1.67
SEC24C-201ENST00000339365 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
SEC24C-201ENST00000339365 MT1FP04733 61 aa4.62□□□□□ -1.67
SEC24C-201ENST00000339365 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
SEC24C-201ENST00000339365 PKHD1P08F94 4074 aa4.61□□□□□ -1.67
SEC24C-201ENST00000339365 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
SEC24C-201ENST00000339365 HERC1Q15751 4861 aa4.59□□□□□ -1.67
SEC24C-201ENST00000339365 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
SEC24C-201ENST00000339365 HECTD4Q9Y4D8 3996 aa4.54□□□□□ -1.68
SEC24C-201ENST00000339365 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
SEC24C-201ENST00000339365 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
SEC24C-201ENST00000339365 LRP2P98164 4655 aa4.52□□□□□ -1.69
SEC24C-201ENST00000339365 ABCA13Q86UQ4 5058 aa4.5□□□□□ -1.69
SEC24C-201ENST00000339365 PKD1P98161 4303 aa4.5□□□□□ -1.69
SEC24C-201ENST00000339365 LCE2CQ5TA81 110 aa4.46□□□□□ -1.7
SEC24C-201ENST00000339365 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
SEC24C-201ENST00000339365 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
SEC24C-201ENST00000339365 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
SEC24C-201ENST00000339365 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
SEC24C-201ENST00000339365 H3BS24 57 aa4.39□□□□□ -1.71
SEC24C-201ENST00000339365 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
SEC24C-201ENST00000339365 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
SEC24C-201ENST00000339365 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
SEC24C-201ENST00000339365 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
SEC24C-201ENST00000339365 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
SEC24C-201ENST00000339365 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
SEC24C-201ENST00000339365 KRTAP19-2Q3LHN2 52 aa4.31□□□□□ -1.72
SEC24C-201ENST00000339365 KRTAP9-3Q9BYQ3 159 aa4.29□□□□□ -1.72
SEC24C-201ENST00000339365 CRCT1Q9UGL9 99 aa4.29□□□□□ -1.72
SEC24C-201ENST00000339365 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
SEC24C-201ENST00000339365 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
SEC24C-201ENST00000339365 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
SEC24C-201ENST00000339365 LCE2AQ5TA79 106 aaPredicted RBP4.25□□□□□ -1.73
SEC24C-201ENST00000339365 LPAP08519 4548 aa4.23□□□□□ -1.73
SEC24C-201ENST00000339365 MT1BP07438 61 aa4.22□□□□□ -1.73
SEC24C-201ENST00000339365 TNXBP22105 4242 aa4.2□□□□□ -1.74
SEC24C-201ENST00000339365 RNF213Q63HN8 5207 aa4.2□□□□□ -1.74
SEC24C-201ENST00000339365 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
SEC24C-201ENST00000339365 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
SEC24C-201ENST00000339365 LCE2BO14633 110 aa4.14□□□□□ -1.75
SEC24C-201ENST00000339365 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
SEC24C-201ENST00000339365 MT1XP80297 61 aa4.13□□□□□ -1.75
SEC24C-201ENST00000339365 SPRR2EP22531 72 aa4.11□□□□□ -1.75
SEC24C-201ENST00000339365 SPRR2BP35325 72 aa4.11□□□□□ -1.75
SEC24C-201ENST00000339365 SPRR2AP35326 72 aa4.11□□□□□ -1.75
SEC24C-201ENST00000339365 MUC17Q685J3 4493 aa4.1□□□□□ -1.75
SEC24C-201ENST00000339365 KRTAP10-7P60409 375 aaPredicted RBP4.09□□□□□ -1.75
SEC24C-201ENST00000339365 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
SEC24C-201ENST00000339365 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.75
SEC24C-201ENST00000339365 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
SEC24C-201ENST00000339365 FLGP20930 4061 aaPredicted RBP4.05□□□□□ -1.76
SEC24C-201ENST00000339365 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
SEC24C-201ENST00000339365 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
SEC24C-201ENST00000339365 SPRR2DP22532 72 aa3.98□□□□□ -1.77
SEC24C-201ENST00000339365 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
SEC24C-201ENST00000339365 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
SEC24C-201ENST00000339365 MT1GP13640 62 aa3.9□□□□□ -1.79
SEC24C-201ENST00000339365 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
SEC24C-201ENST00000339365 KRTAP9-7A8MTY7 169 aa3.8□□□□□ -1.8
SEC24C-201ENST00000339365 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
SEC24C-201ENST00000339365 MUC2Q02817 5179 aa3.77□□□□□ -1.81
SEC24C-201ENST00000339365 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms