RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
NUDCD3-201ENST00000338427 GTF2H5Q6ZYL4 71 aa5.89□□□□□ -1.47
NUDCD3-201ENST00000338427 TRAV22A0A0B4J277 110 aa5.82□□□□□ -1.48
NUDCD3-201ENST00000338427 LOC101927531A0A1B0GV80 90 aa5.8□□□□□ -1.48
NUDCD3-201ENST00000338427 HIST1H4AP62805 103 aaKnown RBP5.78□□□□□ -1.48
NUDCD3-201ENST00000338427 MDN1Q9NU22 5596 aa5.77□□□□□ -1.49
NUDCD3-201ENST00000338427 H0Y9P7 68 aa5.77□□□□□ -1.49
NUDCD3-201ENST00000338427 IMUPQ9GZP8 106 aa5.76□□□□□ -1.49
NUDCD3-201ENST00000338427 KMT2DO14686 5537 aa5.76□□□□□ -1.49
NUDCD3-201ENST00000338427 CRIPTQ9P021 101 aa5.75□□□□□ -1.49
NUDCD3-201ENST00000338427 UQCRQO14949 82 aa5.74□□□□□ -1.49
NUDCD3-201ENST00000338427 NDUFC1O43677 76 aa5.74□□□□□ -1.49
NUDCD3-201ENST00000338427 ACYP1P07311 99 aa5.73□□□□□ -1.49
NUDCD3-201ENST00000338427 KRTAP5-9P26371 169 aa5.72□□□□□ -1.49
NUDCD3-201ENST00000338427 ADM2Q7Z4H4 148 aa5.72□□□□□ -1.49
NUDCD3-201ENST00000338427 K7ERU9 68 aa5.68□□□□□ -1.5
NUDCD3-201ENST00000338427 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
NUDCD3-201ENST00000338427 LINC00208Q96KT6 92 aa5.68□□□□□ -1.5
NUDCD3-201ENST00000338427 FAM240AA0A1B0GVK7 77 aa5.67□□□□□ -1.5
NUDCD3-201ENST00000338427 H0YAA0 97 aa5.67□□□□□ -1.5
NUDCD3-201ENST00000338427 ATOX1O00244 68 aa5.67□□□□□ -1.5
NUDCD3-201ENST00000338427 SCGB1A1P11684 91 aa5.67□□□□□ -1.5
NUDCD3-201ENST00000338427 ATP5EP2Q5VTU8 51 aa5.66□□□□□ -1.5
NUDCD3-201ENST00000338427 A8MUN3 132 aa5.63□□□□□ -1.51
NUDCD3-201ENST00000338427 MT1XP80297 61 aa5.63□□□□□ -1.51
NUDCD3-201ENST00000338427 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
NUDCD3-201ENST00000338427 P0C880 135 aa5.61□□□□□ -1.51
NUDCD3-201ENST00000338427 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
NUDCD3-201ENST00000338427 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
NUDCD3-201ENST00000338427 MP68P56378 58 aa5.56□□□□□ -1.52
NUDCD3-201ENST00000338427 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
NUDCD3-201ENST00000338427 KRTAP3-2Q9BYR7 98 aa5.54□□□□□ -1.52
NUDCD3-201ENST00000338427 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
NUDCD3-201ENST00000338427 R4GN34 69 aa5.52□□□□□ -1.53
NUDCD3-201ENST00000338427 M0QZ58 72 aa5.51□□□□□ -1.53
NUDCD3-201ENST00000338427 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
NUDCD3-201ENST00000338427 SPRR2EP22531 72 aa5.51□□□□□ -1.53
NUDCD3-201ENST00000338427 SPRR2BP35325 72 aa5.51□□□□□ -1.53
NUDCD3-201ENST00000338427 SPRR2AP35326 72 aa5.51□□□□□ -1.53
NUDCD3-201ENST00000338427 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
NUDCD3-201ENST00000338427 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
NUDCD3-201ENST00000338427 J3QR89 54 aa5.5□□□□□ -1.53
NUDCD3-201ENST00000338427 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
NUDCD3-201ENST00000338427 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
NUDCD3-201ENST00000338427 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
NUDCD3-201ENST00000338427 DMAC1Q96GE9 116 aa5.46□□□□□ -1.54
NUDCD3-201ENST00000338427 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
NUDCD3-201ENST00000338427 LCE1AQ5T7P2 110 aa5.44□□□□□ -1.54
NUDCD3-201ENST00000338427 H3BPC8 53 aa5.43□□□□□ -1.54
NUDCD3-201ENST00000338427 C20orf197Q8N268 126 aa5.41□□□□□ -1.54
NUDCD3-201ENST00000338427 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
NUDCD3-201ENST00000338427 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
NUDCD3-201ENST00000338427 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
NUDCD3-201ENST00000338427 ACYP2P14621 99 aa5.32□□□□□ -1.56
NUDCD3-201ENST00000338427 SPRR2DP22532 72 aa5.32□□□□□ -1.56
NUDCD3-201ENST00000338427 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
NUDCD3-201ENST00000338427 TRAV7A0A075B6U4 112 aa5.31□□□□□ -1.56
NUDCD3-201ENST00000338427 MT-ATP8P03928 68 aa5.29□□□□□ -1.56
NUDCD3-201ENST00000338427 ANAPC13Q9BS18 74 aa5.26□□□□□ -1.57
NUDCD3-201ENST00000338427 SNURFQ9Y675 71 aa5.22□□□□□ -1.57
NUDCD3-201ENST00000338427 CHKB-CPT1BH3BT56 60 aa5.21□□□□□ -1.58
NUDCD3-201ENST00000338427 KRTAP13-4Q3LI77 160 aa5.21□□□□□ -1.58
NUDCD3-201ENST00000338427 SPTSSBQ8NFR3 76 aa5.21□□□□□ -1.58
NUDCD3-201ENST00000338427 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
NUDCD3-201ENST00000338427 SMIM20Q8N5G0 67 aa5.18□□□□□ -1.58
NUDCD3-201ENST00000338427 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
NUDCD3-201ENST00000338427 CCDC179H3BU77 68 aa5.08□□□□□ -1.6
NUDCD3-201ENST00000338427 CAMK2N1Q7Z7J9 78 aa5.07□□□□□ -1.6
NUDCD3-201ENST00000338427 SPANXA2-OT1Q8N9U9 137 aa5.06□□□□□ -1.6
NUDCD3-201ENST00000338427 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
NUDCD3-201ENST00000338427 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
NUDCD3-201ENST00000338427 DSTQ03001 7570 aaKnown RBP5.02□□□□□ -1.61
NUDCD3-201ENST00000338427 A0A0D9SG42 100 aa5.02□□□□□ -1.61
NUDCD3-201ENST00000338427 TMEM258P61165 79 aa5□□□□□ -1.61
NUDCD3-201ENST00000338427 SERP2Q8N6R1 65 aa5□□□□□ -1.61
NUDCD3-201ENST00000338427 COA5Q86WW8 74 aa4.99□□□□□ -1.61
NUDCD3-201ENST00000338427 MT1EP04732 61 aa4.98□□□□□ -1.61
NUDCD3-201ENST00000338427 COX7CP15954 63 aa4.98□□□□□ -1.61
NUDCD3-201ENST00000338427 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
NUDCD3-201ENST00000338427 SPATA8Q6RVD6 105 aa4.98□□□□□ -1.61
NUDCD3-201ENST00000338427 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
NUDCD3-201ENST00000338427 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
NUDCD3-201ENST00000338427 KRTAP19-3Q7Z4W3 81 aa4.94□□□□□ -1.62
NUDCD3-201ENST00000338427 PRO0628Q9UI54 55 aa4.94□□□□□ -1.62
NUDCD3-201ENST00000338427 SERP1Q9Y6X1 66 aa4.91□□□□□ -1.62
NUDCD3-201ENST00000338427 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.63
NUDCD3-201ENST00000338427 A0A1B0GU33 70 aa4.88□□□□□ -1.63
NUDCD3-201ENST00000338427 KRTAP12-1P59990 96 aa4.88□□□□□ -1.63
NUDCD3-201ENST00000338427 SEC61GP60059 68 aa4.88□□□□□ -1.63
NUDCD3-201ENST00000338427 CYSTM1Q9H1C7 97 aa4.87□□□□□ -1.63
NUDCD3-201ENST00000338427 SMIM26A0A096LP01 95 aa4.83□□□□□ -1.64
NUDCD3-201ENST00000338427 V9GYY9 64 aa4.83□□□□□ -1.64
NUDCD3-201ENST00000338427 ATP5EP56381 51 aaPredicted RBP4.82□□□□□ -1.64
NUDCD3-201ENST00000338427 MT1GP13640 62 aa4.81□□□□□ -1.64
NUDCD3-201ENST00000338427 H7BZZ5 65 aa4.8□□□□□ -1.64
NUDCD3-201ENST00000338427 A8MU10 97 aa4.79□□□□□ -1.64
NUDCD3-201ENST00000338427 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
NUDCD3-201ENST00000338427 MT1MQ8N339 61 aa4.76□□□□□ -1.65
NUDCD3-201ENST00000338427 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
NUDCD3-201ENST00000338427 MT1LQ93083 61 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms