RNA–Protein interactions for RNA: ENST00000338356.7

CPM-201, Transcript of carboxypeptidase M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPM, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-201ENST00000338356 DYNC2H1Q8NCM8 4307 aaKnown RBP3.7□□□□□ -1.82
CPM-201ENST00000338356 DNAH11Q96DT5 4516 aa3.69□□□□□ -1.82
CPM-201ENST00000338356 TENM3Q9P273 2699 aa3.69□□□□□ -1.82
CPM-201ENST00000338356 DNAH8Q96JB1 4490 aa3.68□□□□□ -1.82
CPM-201ENST00000338356 FBN3Q75N90 2809 aa3.67□□□□□ -1.82
CPM-201ENST00000338356 TGP01266 2768 aa3.66□□□□□ -1.82
CPM-201ENST00000338356 KRTAP12-3P60328 96 aa3.65□□□□□ -1.82
CPM-201ENST00000338356 MXRA5Q9NR99 2828 aa3.63□□□□□ -1.83
CPM-201ENST00000338356 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
CPM-201ENST00000338356 LYSTQ99698 3801 aa3.63□□□□□ -1.83
CPM-201ENST00000338356 NF1P21359 2839 aa3.62□□□□□ -1.83
CPM-201ENST00000338356 DNAH17Q9UFH2 4485 aa3.6□□□□□ -1.83
CPM-201ENST00000338356 CELSR2Q9HCU4 2923 aa3.58□□□□□ -1.84
CPM-201ENST00000338356 MT1HP80294 61 aa3.58□□□□□ -1.84
CPM-201ENST00000338356 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
CPM-201ENST00000338356 KMT2AQ03164 3969 aa3.57□□□□□ -1.84
CPM-201ENST00000338356 KRTAP23-1A1A580 65 aa3.57□□□□□ -1.84
CPM-201ENST00000338356 OTOGQ6ZRI0 2925 aa3.56□□□□□ -1.84
CPM-201ENST00000338356 FAT2Q9NYQ8 4349 aa3.54□□□□□ -1.84
CPM-201ENST00000338356 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
CPM-201ENST00000338356 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
CPM-201ENST00000338356 PLECQ15149 4684 aaKnown RBP3.52□□□□□ -1.85
CPM-201ENST00000338356 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
CPM-201ENST00000338356 PKD1L1Q8TDX9 2849 aa3.47□□□□□ -1.85
CPM-201ENST00000338356 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
CPM-201ENST00000338356 PKHD1L1Q86WI1 4243 aa3.46□□□□□ -1.86
CPM-201ENST00000338356 SPRR2EP22531 72 aa3.46□□□□□ -1.86
CPM-201ENST00000338356 SPRR2BP35325 72 aa3.46□□□□□ -1.86
CPM-201ENST00000338356 SPRR2AP35326 72 aa3.46□□□□□ -1.86
CPM-201ENST00000338356 FBN1P35555 2871 aaKnown RBP3.46□□□□□ -1.86
CPM-201ENST00000338356 STARD9Q9P2P6 4700 aa3.46□□□□□ -1.86
CPM-201ENST00000338356 ZANQ9Y493 2812 aa3.46□□□□□ -1.86
CPM-201ENST00000338356 MT2AP02795 61 aa3.41□□□□□ -1.86
CPM-201ENST00000338356 KRTAP17-1Q9BYP8 105 aa3.4□□□□□ -1.86
CPM-201ENST00000338356 KRTAP4-1Q9BYQ7 146 aa3.4□□□□□ -1.86
CPM-201ENST00000338356 SPRR2DP22532 72 aa3.38□□□□□ -1.87
CPM-201ENST00000338356 SACSQ9NZJ4 4579 aa3.38□□□□□ -1.87
CPM-201ENST00000338356 DNAH5Q8TE73 4624 aa3.37□□□□□ -1.87
CPM-201ENST00000338356 VWFP04275 2813 aa3.34□□□□□ -1.88
CPM-201ENST00000338356 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
CPM-201ENST00000338356 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
CPM-201ENST00000338356 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
CPM-201ENST00000338356 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
CPM-201ENST00000338356 LRP1BQ9NZR2 4599 aa3.29□□□□□ -1.88
CPM-201ENST00000338356 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
CPM-201ENST00000338356 APOBP04114 4563 aaKnown RBP3.28□□□□□ -1.88
CPM-201ENST00000338356 MT1FP04733 61 aa3.28□□□□□ -1.88
CPM-201ENST00000338356 LCE2BO14633 110 aa3.28□□□□□ -1.88
CPM-201ENST00000338356 PKD1P98161 4303 aa3.28□□□□□ -1.88
CPM-201ENST00000338356 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
CPM-201ENST00000338356 KRTAP9-2Q9BYQ4 174 aa3.26□□□□□ -1.89
CPM-201ENST00000338356 COL7A1Q02388 2944 aa3.26□□□□□ -1.89
CPM-201ENST00000338356 MEGF8Q7Z7M0 2845 aa3.24□□□□□ -1.89
CPM-201ENST00000338356 TNXBP22105 4242 aa3.23□□□□□ -1.89
CPM-201ENST00000338356 PKHD1P08F94 4074 aa3.23□□□□□ -1.89
CPM-201ENST00000338356 FAT1Q14517 4588 aa3.21□□□□□ -1.9
CPM-201ENST00000338356 HERC1Q15751 4861 aa3.21□□□□□ -1.9
CPM-201ENST00000338356 KRTAP19-1Q8IUB9 90 aa3.19□□□□□ -1.9
CPM-201ENST00000338356 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
CPM-201ENST00000338356 LCE2DQ5TA82 110 aaPredicted RBP3.18□□□□□ -1.9
CPM-201ENST00000338356 MUC17Q685J3 4493 aa3.16□□□□□ -1.9
CPM-201ENST00000338356 MYCBP2O75592 4640 aa3.15□□□□□ -1.9
CPM-201ENST00000338356 HSPG2P98160 4391 aa3.15□□□□□ -1.91
CPM-201ENST00000338356 LCE2CQ5TA81 110 aa3.14□□□□□ -1.91
CPM-201ENST00000338356 FAT3Q8TDW7 4589 aa3.14□□□□□ -1.91
CPM-201ENST00000338356 SRRM2Q9UQ35 2752 aaKnown RBP3.11□□□□□ -1.91
CPM-201ENST00000338356 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
CPM-201ENST00000338356 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
CPM-201ENST00000338356 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
CPM-201ENST00000338356 LPAP08519 4548 aa3.09□□□□□ -1.92
CPM-201ENST00000338356 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
CPM-201ENST00000338356 MT1GP13640 62 aa3.04□□□□□ -1.92
CPM-201ENST00000338356 FLGP20930 4061 aaPredicted RBP3.02□□□□□ -1.93
CPM-201ENST00000338356 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
CPM-201ENST00000338356 MT1XP80297 61 aa3□□□□□ -1.93
CPM-201ENST00000338356 DNHD1Q96M86 4753 aa3□□□□□ -1.93
CPM-201ENST00000338356 KRTAP9-8Q9BYQ0 159 aa2.98□□□□□ -1.93
CPM-201ENST00000338356 KRTAP9-3Q9BYQ3 159 aa2.97□□□□□ -1.93
CPM-201ENST00000338356 LRP1Q07954 4544 aaKnown RBP2.96□□□□□ -1.94
CPM-201ENST00000338356 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
CPM-201ENST00000338356 RYR1P21817 5038 aa2.95□□□□□ -1.94
CPM-201ENST00000338356 KRTAP19-6Q3LI70 58 aa2.94□□□□□ -1.94
CPM-201ENST00000338356 RYR3Q15413 4870 aa2.93□□□□□ -1.94
CPM-201ENST00000338356 KRTAP4-8A0A0G2JLE6 195 aa2.91□□□□□ -1.94
CPM-201ENST00000338356 KRTAP2-3P0C7H8 128 aa2.91□□□□□ -1.94
CPM-201ENST00000338356 KRTAP4-8Q9BYQ9 185 aa2.91□□□□□ -1.94
CPM-201ENST00000338356 KRTAP2-4Q9BYR9 128 aa2.91□□□□□ -1.94
CPM-201ENST00000338356 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.95
CPM-201ENST00000338356 MT1BP07438 61 aa2.9□□□□□ -1.95
CPM-201ENST00000338356 HERC2O95714 4834 aa2.89□□□□□ -1.95
CPM-201ENST00000338356 HYDINQ4G0P3 5121 aa2.89□□□□□ -1.95
CPM-201ENST00000338356 MT4P47944 62 aa2.86□□□□□ -1.95
CPM-201ENST00000338356 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
CPM-201ENST00000338356 RYR2Q92736 4967 aa2.85□□□□□ -1.95
CPM-201ENST00000338356 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
CPM-201ENST00000338356 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
CPM-201ENST00000338356 LCE2AQ5TA79 106 aaPredicted RBP2.81□□□□□ -1.96
CPM-201ENST00000338356 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
CPM-201ENST00000338356 PCLOQ9Y6V0 5065 aa2.79□□□□□ -1.96
CPM-201ENST00000338356 LOC100996750A0A140TA64 210 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms