RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 SPRR2GQ9BYE4 73 aa9.4□□□□□ -0.91
RAB28-203ENST00000338176 KLKP1Q107X0 134 aa9.38□□□□□ -0.91
RAB28-203ENST00000338176 LINC00208Q96KT6 92 aa9.38□□□□□ -0.91
RAB28-203ENST00000338176 OCR1Q9BZK8 76 aa9.37□□□□□ -0.91
RAB28-203ENST00000338176 KRTAP19-8Q3LI54 63 aa9.35□□□□□ -0.91
RAB28-203ENST00000338176 Q5VV11 94 aa9.33□□□□□ -0.92
RAB28-203ENST00000338176 NDUFC1O43677 76 aa9.28□□□□□ -0.92
RAB28-203ENST00000338176 MP68P56378 58 aa9.27□□□□□ -0.92
RAB28-203ENST00000338176 J3QR89 54 aa9.25□□□□□ -0.93
RAB28-203ENST00000338176 IMUPQ9GZP8 106 aa9.24□□□□□ -0.93
RAB28-203ENST00000338176 A6NN06 94 aa9.23□□□□□ -0.93
RAB28-203ENST00000338176 A8MUN3 132 aa9.23□□□□□ -0.93
RAB28-203ENST00000338176 CRIPTQ9P021 101 aa9.17□□□□□ -0.94
RAB28-203ENST00000338176 H0YAA0 97 aa9.17□□□□□ -0.94
RAB28-203ENST00000338176 ADM2Q7Z4H4 148 aa9.16□□□□□ -0.94
RAB28-203ENST00000338176 SCGB1A1P11684 91 aa9.15□□□□□ -0.94
RAB28-203ENST00000338176 KRTAP10-5P60370 271 aa9.14□□□□□ -0.95
RAB28-203ENST00000338176 KRTAP6-3Q3LI67 103 aa9.14□□□□□ -0.95
RAB28-203ENST00000338176 H3BPC8 53 aa9.11□□□□□ -0.95
RAB28-203ENST00000338176 MT-ATP8P03928 68 aa9.07□□□□□ -0.96
RAB28-203ENST00000338176 DMAC1Q96GE9 116 aa9.04□□□□□ -0.96
RAB28-203ENST00000338176 P0C880 135 aa8.99□□□□□ -0.97
RAB28-203ENST00000338176 K7ERU9 68 aa8.94□□□□□ -0.98
RAB28-203ENST00000338176 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
RAB28-203ENST00000338176 TRAV7A0A075B6U4 112 aa8.91□□□□□ -0.98
RAB28-203ENST00000338176 MUC12Q9UKN1 5478 aa8.89□□□□□ -0.99
RAB28-203ENST00000338176 R4GN34 69 aa8.87□□□□□ -0.99
RAB28-203ENST00000338176 M0QZ58 72 aa8.84□□□□□ -0.99
RAB28-203ENST00000338176 NEBP20929 6669 aa8.84□□□□□ -0.99
RAB28-203ENST00000338176 SMIM20Q8N5G0 67 aa8.84□□□□□ -1
RAB28-203ENST00000338176 MT1XP80297 61 aa8.82□□□□□ -1
RAB28-203ENST00000338176 C20orf197Q8N268 126 aa8.82□□□□□ -1
RAB28-203ENST00000338176 ACYP2P14621 99 aa8.81□□□□□ -1
RAB28-203ENST00000338176 PLAC4Q8WY50 150 aa8.8□□□□□ -1
RAB28-203ENST00000338176 SNURFQ9Y675 71 aa8.8□□□□□ -1
RAB28-203ENST00000338176 KMT2DO14686 5537 aa8.77□□□□□ -1.01
RAB28-203ENST00000338176 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
RAB28-203ENST00000338176 KRTAP5-9P26371 169 aa8.73□□□□□ -1.01
RAB28-203ENST00000338176 PRO2289Q9P1D8 64 aa8.72□□□□□ -1.01
RAB28-203ENST00000338176 MDN1Q9NU22 5596 aa8.67□□□□□ -1.02
RAB28-203ENST00000338176 CHKB-CPT1BH3BT56 60 aa8.66□□□□□ -1.02
RAB28-203ENST00000338176 SPTSSBQ8NFR3 76 aa8.64□□□□□ -1.03
RAB28-203ENST00000338176 SERP2Q8N6R1 65 aa8.61□□□□□ -1.03
RAB28-203ENST00000338176 SPANXA2-OT1Q8N9U9 137 aa8.57□□□□□ -1.04
RAB28-203ENST00000338176 KRTAP12-2P59991 146 aa8.53□□□□□ -1.04
RAB28-203ENST00000338176 SPRR2FQ96RM1 72 aa8.53□□□□□ -1.04
RAB28-203ENST00000338176 KRTAP8-1Q8IUC2 63 aa8.48□□□□□ -1.05
RAB28-203ENST00000338176 KRTAP4-8A0A0G2JLE6 195 aa8.48□□□□□ -1.05
RAB28-203ENST00000338176 KRTAP4-8Q9BYQ9 185 aa8.48□□□□□ -1.05
RAB28-203ENST00000338176 KRTAP20-1Q3LI63 56 aa8.45□□□□□ -1.06
RAB28-203ENST00000338176 KRTAP10-7P60409 375 aaPredicted RBP8.45□□□□□ -1.06
RAB28-203ENST00000338176 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
RAB28-203ENST00000338176 SPRR2EP22531 72 aa8.4□□□□□ -1.07
RAB28-203ENST00000338176 SPRR2BP35325 72 aa8.4□□□□□ -1.07
RAB28-203ENST00000338176 SPRR2AP35326 72 aa8.4□□□□□ -1.07
RAB28-203ENST00000338176 COA5Q86WW8 74 aa8.4□□□□□ -1.07
RAB28-203ENST00000338176 COX7CP15954 63 aa8.35□□□□□ -1.07
RAB28-203ENST00000338176 CYSTM1Q9H1C7 97 aa8.35□□□□□ -1.07
RAB28-203ENST00000338176 KRTAP10-12P60413 245 aa8.34□□□□□ -1.07
RAB28-203ENST00000338176 LCE1AQ5T7P2 110 aa8.29□□□□□ -1.08
RAB28-203ENST00000338176 H7BZZ5 65 aa8.25□□□□□ -1.09
RAB28-203ENST00000338176 KRTAP2-3P0C7H8 128 aa8.22□□□□□ -1.09
RAB28-203ENST00000338176 KRTAP2-4Q9BYR9 128 aa8.22□□□□□ -1.09
RAB28-203ENST00000338176 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
RAB28-203ENST00000338176 A0A0D9SG42 100 aa8.16□□□□□ -1.1
RAB28-203ENST00000338176 SERP1Q9Y6X1 66 aa8.16□□□□□ -1.1
RAB28-203ENST00000338176 SEC61GP60059 68 aa8.15□□□□□ -1.1
RAB28-203ENST00000338176 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.1
RAB28-203ENST00000338176 SPRR2DP22532 72 aa8.1□□□□□ -1.11
RAB28-203ENST00000338176 A0A1B0GU33 70 aa8.07□□□□□ -1.12
RAB28-203ENST00000338176 ANAPC13Q9BS18 74 aa8.07□□□□□ -1.12
RAB28-203ENST00000338176 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
RAB28-203ENST00000338176 CCDC179H3BU77 68 aa7.99□□□□□ -1.13
RAB28-203ENST00000338176 KRTAP12-1P59990 96 aa7.97□□□□□ -1.13
RAB28-203ENST00000338176 KRTAP2-2Q9BYT5 123 aa7.97□□□□□ -1.13
RAB28-203ENST00000338176 KRTAP2-1Q9BYU5 128 aa7.97□□□□□ -1.13
RAB28-203ENST00000338176 A0A1B0GU69 56 aa7.93□□□□□ -1.14
RAB28-203ENST00000338176 KRTAP19-7Q3SYF9 63 aa7.89□□□□□ -1.15
RAB28-203ENST00000338176 LCE3BQ5TA77 95 aa7.88□□□□□ -1.15
RAB28-203ENST00000338176 A8MU10 97 aa7.87□□□□□ -1.15
RAB28-203ENST00000338176 SMIM26A0A096LP01 95 aa7.8□□□□□ -1.16
RAB28-203ENST00000338176 MT1EP04732 61 aa7.8□□□□□ -1.16
RAB28-203ENST00000338176 ATP5EP56381 51 aaPredicted RBP7.73□□□□□ -1.17
RAB28-203ENST00000338176 LCE5AQ5TCM9 118 aa7.73□□□□□ -1.17
RAB28-203ENST00000338176 KRTAP19-5Q3LI72 72 aa7.71□□□□□ -1.18
RAB28-203ENST00000338176 KRTAP19-3Q7Z4W3 81 aa7.71□□□□□ -1.18
RAB28-203ENST00000338176 DSTQ03001 7570 aaKnown RBP7.65□□□□□ -1.18
RAB28-203ENST00000338176 PRR15LQ9BU68 103 aa7.64□□□□□ -1.19
RAB28-203ENST00000338176 C10orf95Q9H7T3 257 aa7.64□□□□□ -1.19
RAB28-203ENST00000338176 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
RAB28-203ENST00000338176 TMEM258P61165 79 aa7.57□□□□□ -1.2
RAB28-203ENST00000338176 LCE3AQ5TA76 89 aa7.56□□□□□ -1.2
RAB28-203ENST00000338176 PCP4P48539 62 aa7.53□□□□□ -1.2
RAB28-203ENST00000338176 TNP1P09430 55 aa7.52□□□□□ -1.21
RAB28-203ENST00000338176 MT1GP13640 62 aa7.5□□□□□ -1.21
RAB28-203ENST00000338176 MT1LQ93083 61 aa7.46□□□□□ -1.21
RAB28-203ENST00000338176 MT1MQ8N339 61 aa7.43□□□□□ -1.22
RAB28-203ENST00000338176 UQCR11O14957 56 aa7.42□□□□□ -1.22
RAB28-203ENST00000338176 PP632Q6XCG6 107 aa7.4□□□□□ -1.23
RAB28-203ENST00000338176 KRTAP4-9Q9BYQ8 210 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms