RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 KRTAP3-3Q9BYR6 98 aa5.28□□□□□ -1.56
LRAT-201ENST00000336356 PLECQ15149 4684 aaKnown RBP5.27□□□□□ -1.57
LRAT-201ENST00000336356 BIRC6Q9NR09 4857 aa5.25□□□□□ -1.57
LRAT-201ENST00000336356 DYNC2H1Q8NCM8 4307 aaKnown RBP5.23□□□□□ -1.57
LRAT-201ENST00000336356 VPS13CQ709C8 3753 aa5.19□□□□□ -1.58
LRAT-201ENST00000336356 DNAH5Q8TE73 4624 aa5.16□□□□□ -1.58
LRAT-201ENST00000336356 VPS13DQ5THJ4 4388 aa5.16□□□□□ -1.58
LRAT-201ENST00000336356 PRKDCP78527 4128 aaKnown RBP5.15□□□□□ -1.58
LRAT-201ENST00000336356 DYNC1H1Q14204 4646 aaKnown RBP5.12□□□□□ -1.59
LRAT-201ENST00000336356 DNAH3Q8TD57 4116 aa5.1□□□□□ -1.59
LRAT-201ENST00000336356 DNAH6Q9C0G6 4158 aa5.09□□□□□ -1.59
LRAT-201ENST00000336356 INE1O15225 51 aa5.08□□□□□ -1.6
LRAT-201ENST00000336356 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
LRAT-201ENST00000336356 DNAH17Q9UFH2 4485 aa5.03□□□□□ -1.6
LRAT-201ENST00000336356 RYR2Q92736 4967 aa5.02□□□□□ -1.61
LRAT-201ENST00000336356 STARD9Q9P2P6 4700 aa5□□□□□ -1.61
LRAT-201ENST00000336356 FAT2Q9NYQ8 4349 aa4.99□□□□□ -1.61
LRAT-201ENST00000336356 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
LRAT-201ENST00000336356 LRP1BQ9NZR2 4599 aa4.96□□□□□ -1.62
LRAT-201ENST00000336356 RYR1P21817 5038 aa4.95□□□□□ -1.62
LRAT-201ENST00000336356 RYR3Q15413 4870 aa4.95□□□□□ -1.62
LRAT-201ENST00000336356 SACSQ9NZJ4 4579 aa4.91□□□□□ -1.62
LRAT-201ENST00000336356 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.62
LRAT-201ENST00000336356 CSMD3Q7Z407 3707 aa4.88□□□□□ -1.63
LRAT-201ENST00000336356 CMYA5Q8N3K9 4069 aa4.86□□□□□ -1.63
LRAT-201ENST00000336356 DNAH2Q9P225 4427 aa4.86□□□□□ -1.63
LRAT-201ENST00000336356 MT1HP80294 61 aa4.85□□□□□ -1.63
LRAT-201ENST00000336356 HERC2O95714 4834 aa4.83□□□□□ -1.64
LRAT-201ENST00000336356 DNAH8Q96JB1 4490 aa4.8□□□□□ -1.64
LRAT-201ENST00000336356 DNAH7Q8WXX0 4024 aa4.8□□□□□ -1.64
LRAT-201ENST00000336356 LORP23490 312 aaPredicted RBP4.73□□□□□ -1.65
LRAT-201ENST00000336356 FAT1Q14517 4588 aa4.73□□□□□ -1.65
LRAT-201ENST00000336356 KRTAP4-1Q9BYQ7 146 aa4.72□□□□□ -1.65
LRAT-201ENST00000336356 PCLOQ9Y6V0 5065 aa4.71□□□□□ -1.66
LRAT-201ENST00000336356 APOBP04114 4563 aaKnown RBP4.68□□□□□ -1.66
LRAT-201ENST00000336356 KMT2AQ03164 3969 aa4.65□□□□□ -1.66
LRAT-201ENST00000336356 HECTD4Q9Y4D8 3996 aa4.64□□□□□ -1.67
LRAT-201ENST00000336356 HERC1Q15751 4861 aa4.63□□□□□ -1.67
LRAT-201ENST00000336356 MT2AP02795 61 aa4.63□□□□□ -1.67
LRAT-201ENST00000336356 KMT2CQ8NEZ4 4911 aaKnown RBP4.63□□□□□ -1.67
LRAT-201ENST00000336356 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
LRAT-201ENST00000336356 HSPG2P98160 4391 aa4.62□□□□□ -1.67
LRAT-201ENST00000336356 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
LRAT-201ENST00000336356 FAT3Q8TDW7 4589 aa4.59□□□□□ -1.67
LRAT-201ENST00000336356 PKHD1P08F94 4074 aa4.57□□□□□ -1.68
LRAT-201ENST00000336356 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
LRAT-201ENST00000336356 LYSTQ99698 3801 aa4.56□□□□□ -1.68
LRAT-201ENST00000336356 LCE2DQ5TA82 110 aaPredicted RBP4.56□□□□□ -1.68
LRAT-201ENST00000336356 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
LRAT-201ENST00000336356 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
LRAT-201ENST00000336356 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.69
LRAT-201ENST00000336356 HYDINQ4G0P3 5121 aa4.51□□□□□ -1.69
LRAT-201ENST00000336356 EPPK1P58107 5090 aaKnown RBP4.5□□□□□ -1.69
LRAT-201ENST00000336356 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
LRAT-201ENST00000336356 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
LRAT-201ENST00000336356 VPS13BQ7Z7G8 4022 aa4.49□□□□□ -1.69
LRAT-201ENST00000336356 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
LRAT-201ENST00000336356 ABCA13Q86UQ4 5058 aa4.49□□□□□ -1.69
LRAT-201ENST00000336356 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
LRAT-201ENST00000336356 FRAS1Q86XX4 4008 aa4.49□□□□□ -1.69
LRAT-201ENST00000336356 MT1FP04733 61 aa4.48□□□□□ -1.69
LRAT-201ENST00000336356 KRTAP9-6A0A140TA67 174 aa4.48□□□□□ -1.69
LRAT-201ENST00000336356 LCE2AQ5TA79 106 aaPredicted RBP4.42□□□□□ -1.7
LRAT-201ENST00000336356 PKD1P98161 4303 aa4.41□□□□□ -1.7
LRAT-201ENST00000336356 LCE2CQ5TA81 110 aa4.4□□□□□ -1.7
LRAT-201ENST00000336356 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
LRAT-201ENST00000336356 LRP1Q07954 4544 aaKnown RBP4.35□□□□□ -1.71
LRAT-201ENST00000336356 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
LRAT-201ENST00000336356 KRTAP10-5P60370 271 aa4.28□□□□□ -1.72
LRAT-201ENST00000336356 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
LRAT-201ENST00000336356 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
LRAT-201ENST00000336356 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
LRAT-201ENST00000336356 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
LRAT-201ENST00000336356 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
LRAT-201ENST00000336356 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
LRAT-201ENST00000336356 LRP2P98164 4655 aa4.2□□□□□ -1.74
LRAT-201ENST00000336356 MUC17Q685J3 4493 aa4.17□□□□□ -1.74
LRAT-201ENST00000336356 SPRR2EP22531 72 aa4.16□□□□□ -1.74
LRAT-201ENST00000336356 SPRR2BP35325 72 aa4.16□□□□□ -1.74
LRAT-201ENST00000336356 SPRR2AP35326 72 aa4.16□□□□□ -1.74
LRAT-201ENST00000336356 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
LRAT-201ENST00000336356 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
LRAT-201ENST00000336356 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
LRAT-201ENST00000336356 TNXBP22105 4242 aa4.12□□□□□ -1.75
LRAT-201ENST00000336356 MT1BP07438 61 aa4.09□□□□□ -1.75
LRAT-201ENST00000336356 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.76
LRAT-201ENST00000336356 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
LRAT-201ENST00000336356 LCE2BO14633 110 aa4.06□□□□□ -1.76
LRAT-201ENST00000336356 SPRR2DP22532 72 aa4.06□□□□□ -1.76
LRAT-201ENST00000336356 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
LRAT-201ENST00000336356 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
LRAT-201ENST00000336356 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
LRAT-201ENST00000336356 FAT4Q6V0I7 4981 aa3.99□□□□□ -1.77
LRAT-201ENST00000336356 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
LRAT-201ENST00000336356 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
LRAT-201ENST00000336356 MT1XP80297 61 aa3.95□□□□□ -1.78
LRAT-201ENST00000336356 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
LRAT-201ENST00000336356 LPAP08519 4548 aa3.9□□□□□ -1.79
LRAT-201ENST00000336356 MT1GP13640 62 aa3.89□□□□□ -1.79
LRAT-201ENST00000336356 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms