RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 S4R3F8 94 aa6.06□□□□□ -1.44
CSPG4P4Y-201ENST00000333235 RYR3Q15413 4870 aa6.04□□□□□ -1.44
CSPG4P4Y-201ENST00000333235 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
CSPG4P4Y-201ENST00000333235 A0A0D9SG42 100 aa6.01□□□□□ -1.45
CSPG4P4Y-201ENST00000333235 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
CSPG4P4Y-201ENST00000333235 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
CSPG4P4Y-201ENST00000333235 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
CSPG4P4Y-201ENST00000333235 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
CSPG4P4Y-201ENST00000333235 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
CSPG4P4Y-201ENST00000333235 TNXBP22105 4242 aa5.92□□□□□ -1.46
CSPG4P4Y-201ENST00000333235 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
CSPG4P4Y-201ENST00000333235 ROMO1P60602 79 aa5.91□□□□□ -1.46
CSPG4P4Y-201ENST00000333235 HSPG2P98160 4391 aa5.9□□□□□ -1.46
CSPG4P4Y-201ENST00000333235 MT1HL1P0DM35 61 aa5.89□□□□□ -1.47
CSPG4P4Y-201ENST00000333235 P0C880 135 aa5.88□□□□□ -1.47
CSPG4P4Y-201ENST00000333235 RYR1P21817 5038 aa5.88□□□□□ -1.47
CSPG4P4Y-201ENST00000333235 KRTAP13-4Q3LI77 160 aa5.86□□□□□ -1.47
CSPG4P4Y-201ENST00000333235 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
CSPG4P4Y-201ENST00000333235 TPRXLQ17RH7 258 aa5.85□□□□□ -1.47
CSPG4P4Y-201ENST00000333235 H3BS24 57 aa5.85□□□□□ -1.47
CSPG4P4Y-201ENST00000333235 KIAA1109Q2LD37 5005 aa5.84□□□□□ -1.47
CSPG4P4Y-201ENST00000333235 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
CSPG4P4Y-201ENST00000333235 EPPK1P58107 5090 aaKnown RBP5.83□□□□□ -1.48
CSPG4P4Y-201ENST00000333235 KRTAP17-1Q9BYP8 105 aa5.8□□□□□ -1.48
CSPG4P4Y-201ENST00000333235 M0QZ58 72 aa5.76□□□□□ -1.49
CSPG4P4Y-201ENST00000333235 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
CSPG4P4Y-201ENST00000333235 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
CSPG4P4Y-201ENST00000333235 J3QL48 77 aa5.71□□□□□ -1.5
CSPG4P4Y-201ENST00000333235 LRP2P98164 4655 aa5.71□□□□□ -1.5
CSPG4P4Y-201ENST00000333235 R4GN34 69 aa5.69□□□□□ -1.5
CSPG4P4Y-201ENST00000333235 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
CSPG4P4Y-201ENST00000333235 C10orf95Q9H7T3 257 aa5.66□□□□□ -1.5
CSPG4P4Y-201ENST00000333235 LPAP08519 4548 aa5.64□□□□□ -1.51
CSPG4P4Y-201ENST00000333235 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
CSPG4P4Y-201ENST00000333235 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
CSPG4P4Y-201ENST00000333235 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
CSPG4P4Y-201ENST00000333235 HERC2O95714 4834 aa5.51□□□□□ -1.53
CSPG4P4Y-201ENST00000333235 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
CSPG4P4Y-201ENST00000333235 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
CSPG4P4Y-201ENST00000333235 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
CSPG4P4Y-201ENST00000333235 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
CSPG4P4Y-201ENST00000333235 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
CSPG4P4Y-201ENST00000333235 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
CSPG4P4Y-201ENST00000333235 NDUFAF8A1L188 74 aa5.34□□□□□ -1.55
CSPG4P4Y-201ENST00000333235 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
CSPG4P4Y-201ENST00000333235 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
CSPG4P4Y-201ENST00000333235 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
CSPG4P4Y-201ENST00000333235 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
CSPG4P4Y-201ENST00000333235 MUC2Q02817 5179 aa5.24□□□□□ -1.57
CSPG4P4Y-201ENST00000333235 HERC1Q15751 4861 aa5.23□□□□□ -1.57
CSPG4P4Y-201ENST00000333235 M0R2T5 61 aa5.21□□□□□ -1.58
CSPG4P4Y-201ENST00000333235 TNP1P09430 55 aa5.19□□□□□ -1.58
CSPG4P4Y-201ENST00000333235 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
CSPG4P4Y-201ENST00000333235 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
CSPG4P4Y-201ENST00000333235 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
CSPG4P4Y-201ENST00000333235 KRTAP10-10P60014 251 aa5□□□□□ -1.61
CSPG4P4Y-201ENST00000333235 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
CSPG4P4Y-201ENST00000333235 FAT4Q6V0I7 4981 aa4.99□□□□□ -1.61
CSPG4P4Y-201ENST00000333235 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
CSPG4P4Y-201ENST00000333235 SPRR2GQ9BYE4 73 aa4.98□□□□□ -1.61
CSPG4P4Y-201ENST00000333235 UBR4Q5T4S7 5183 aa4.94□□□□□ -1.62
CSPG4P4Y-201ENST00000333235 MT1HP80294 61 aa4.93□□□□□ -1.62
CSPG4P4Y-201ENST00000333235 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
CSPG4P4Y-201ENST00000333235 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
CSPG4P4Y-201ENST00000333235 MT2AP02795 61 aa4.86□□□□□ -1.63
CSPG4P4Y-201ENST00000333235 MT1FP04733 61 aa4.86□□□□□ -1.63
CSPG4P4Y-201ENST00000333235 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
CSPG4P4Y-201ENST00000333235 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CSPG4P4Y-201ENST00000333235 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
CSPG4P4Y-201ENST00000333235 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
CSPG4P4Y-201ENST00000333235 MT1BP07438 61 aa4.67□□□□□ -1.66
CSPG4P4Y-201ENST00000333235 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
CSPG4P4Y-201ENST00000333235 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
CSPG4P4Y-201ENST00000333235 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
CSPG4P4Y-201ENST00000333235 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
CSPG4P4Y-201ENST00000333235 MT1XP80297 61 aa4.64□□□□□ -1.67
CSPG4P4Y-201ENST00000333235 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
CSPG4P4Y-201ENST00000333235 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.68
CSPG4P4Y-201ENST00000333235 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
CSPG4P4Y-201ENST00000333235 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
CSPG4P4Y-201ENST00000333235 LCE2BO14633 110 aa4.4□□□□□ -1.7
CSPG4P4Y-201ENST00000333235 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
CSPG4P4Y-201ENST00000333235 USH2AO75445 5202 aa4.35□□□□□ -1.71
CSPG4P4Y-201ENST00000333235 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
CSPG4P4Y-201ENST00000333235 INE1O15225 51 aa4.3□□□□□ -1.72
CSPG4P4Y-201ENST00000333235 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
CSPG4P4Y-201ENST00000333235 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
CSPG4P4Y-201ENST00000333235 KMT2DO14686 5537 aa4.26□□□□□ -1.73
CSPG4P4Y-201ENST00000333235 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
CSPG4P4Y-201ENST00000333235 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
CSPG4P4Y-201ENST00000333235 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
CSPG4P4Y-201ENST00000333235 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
CSPG4P4Y-201ENST00000333235 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
CSPG4P4Y-201ENST00000333235 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
CSPG4P4Y-201ENST00000333235 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
CSPG4P4Y-201ENST00000333235 MT1EP04732 61 aa4.04□□□□□ -1.76
CSPG4P4Y-201ENST00000333235 MT1LQ93083 61 aa4.04□□□□□ -1.76
CSPG4P4Y-201ENST00000333235 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
CSPG4P4Y-201ENST00000333235 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.77
CSPG4P4Y-201ENST00000333235 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms