RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 Q5VSD8 79 aa10.15□□□□□ -0.78
LAMP1-201ENST00000332556 KRTAP3-1Q9BYR8 98 aa10.15□□□□□ -0.78
LAMP1-201ENST00000332556 RYR1P21817 5038 aa10.1□□□□□ -0.79
LAMP1-201ENST00000332556 A0A1B0GU33 70 aa10.09□□□□□ -0.79
LAMP1-201ENST00000332556 EPPK1P58107 5090 aaKnown RBP10.04□□□□□ -0.8
LAMP1-201ENST00000332556 H1FX-AS1Q4G0G2 97 aa10.02□□□□□ -0.81
LAMP1-201ENST00000332556 LPAP08519 4548 aa10□□□□□ -0.81
LAMP1-201ENST00000332556 KRTAP10-8P60410 259 aa10□□□□□ -0.81
LAMP1-201ENST00000332556 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
LAMP1-201ENST00000332556 KRTAP25-1Q3LHN0 102 aa9.93□□□□□ -0.82
LAMP1-201ENST00000332556 COX6B2Q6YFQ2 88 aa9.89□□□□□ -0.83
LAMP1-201ENST00000332556 LRP2P98164 4655 aa9.87□□□□□ -0.83
LAMP1-201ENST00000332556 XP32Q5T750 250 aa9.87□□□□□ -0.83
LAMP1-201ENST00000332556 ABCA13Q86UQ4 5058 aa9.86□□□□□ -0.83
LAMP1-201ENST00000332556 H3BS24 57 aa9.85□□□□□ -0.83
LAMP1-201ENST00000332556 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
LAMP1-201ENST00000332556 RPL37P61927 97 aaKnown RBP9.79□□□□□ -0.84
LAMP1-201ENST00000332556 K7ERS5 55 aa9.77□□□□□ -0.85
LAMP1-201ENST00000332556 KRTAP4-5Q9BYR2 181 aa9.74□□□□□ -0.85
LAMP1-201ENST00000332556 A0A0D9SG42 100 aa9.74□□□□□ -0.85
LAMP1-201ENST00000332556 ROMO1P60602 79 aa9.72□□□□□ -0.85
LAMP1-201ENST00000332556 KRTAP13-4Q3LI77 160 aa9.71□□□□□ -0.86
LAMP1-201ENST00000332556 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
LAMP1-201ENST00000332556 KRTAP10-6P60371 365 aaPredicted RBP9.69□□□□□ -0.86
LAMP1-201ENST00000332556 A0A0A0MQY5 61 aa9.6□□□□□ -0.87
LAMP1-201ENST00000332556 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.88
LAMP1-201ENST00000332556 S4R3F8 94 aa9.58□□□□□ -0.88
LAMP1-201ENST00000332556 P0C880 135 aa9.54□□□□□ -0.88
LAMP1-201ENST00000332556 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
LAMP1-201ENST00000332556 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
LAMP1-201ENST00000332556 KRTAP12-2P59991 146 aa9.4□□□□□ -0.9
LAMP1-201ENST00000332556 SPINT4Q6UDR6 99 aa9.4□□□□□ -0.9
LAMP1-201ENST00000332556 HERC2O95714 4834 aa9.38□□□□□ -0.91
LAMP1-201ENST00000332556 MUC2Q02817 5179 aa9.37□□□□□ -0.91
LAMP1-201ENST00000332556 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
LAMP1-201ENST00000332556 KRTAP12-1P59990 96 aa9.26□□□□□ -0.93
LAMP1-201ENST00000332556 MUC17Q685J3 4493 aa9.25□□□□□ -0.93
LAMP1-201ENST00000332556 KRTAP4-1Q9BYQ7 146 aa9.25□□□□□ -0.93
LAMP1-201ENST00000332556 HERC1Q15751 4861 aa9.12□□□□□ -0.95
LAMP1-201ENST00000332556 KRTAP15-1Q3LI76 137 aa9.11□□□□□ -0.95
LAMP1-201ENST00000332556 NDUFAF8A1L188 74 aa9.1□□□□□ -0.95
LAMP1-201ENST00000332556 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
LAMP1-201ENST00000332556 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
LAMP1-201ENST00000332556 M0QZ58 72 aa9.03□□□□□ -0.96
LAMP1-201ENST00000332556 PCLOQ9Y6V0 5065 aa9.03□□□□□ -0.96
LAMP1-201ENST00000332556 BIRC6Q9NR09 4857 aa8.99□□□□□ -0.97
LAMP1-201ENST00000332556 R4GN34 69 aa8.92□□□□□ -0.98
LAMP1-201ENST00000332556 FAT4Q6V0I7 4981 aa8.88□□□□□ -0.99
LAMP1-201ENST00000332556 KRTAP19-2Q3LHN2 52 aa8.87□□□□□ -0.99
LAMP1-201ENST00000332556 RNF213Q63HN8 5207 aa8.79□□□□□ -1
LAMP1-201ENST00000332556 HMCN2Q8NDA2 5059 aa8.78□□□□□ -1
LAMP1-201ENST00000332556 FLGP20930 4061 aaPredicted RBP8.71□□□□□ -1.02
LAMP1-201ENST00000332556 UBR4Q5T4S7 5183 aa8.65□□□□□ -1.03
LAMP1-201ENST00000332556 PLAC4Q8WY50 150 aa8.62□□□□□ -1.03
LAMP1-201ENST00000332556 CAMK2N1Q7Z7J9 78 aa8.5□□□□□ -1.05
LAMP1-201ENST00000332556 LCE2CQ5TA81 110 aa8.47□□□□□ -1.05
LAMP1-201ENST00000332556 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
LAMP1-201ENST00000332556 M0R2T5 61 aa8.38□□□□□ -1.07
LAMP1-201ENST00000332556 LCE2BO14633 110 aa8.36□□□□□ -1.07
LAMP1-201ENST00000332556 PP632Q6XCG6 107 aa8.3□□□□□ -1.08
LAMP1-201ENST00000332556 LUZP6Q538Z0 58 aa8.26□□□□□ -1.09
LAMP1-201ENST00000332556 MT1HP80294 61 aa8.24□□□□□ -1.09
LAMP1-201ENST00000332556 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
LAMP1-201ENST00000332556 MT1FP04733 61 aa8.13□□□□□ -1.11
LAMP1-201ENST00000332556 TNP1P09430 55 aa8.13□□□□□ -1.11
LAMP1-201ENST00000332556 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
LAMP1-201ENST00000332556 MT2AP02795 61 aa8.07□□□□□ -1.12
LAMP1-201ENST00000332556 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
LAMP1-201ENST00000332556 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
LAMP1-201ENST00000332556 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.14
LAMP1-201ENST00000332556 SPRR5A0A1B0GTR4 108 aa7.88□□□□□ -1.15
LAMP1-201ENST00000332556 USH2AO75445 5202 aa7.82□□□□□ -1.16
LAMP1-201ENST00000332556 LCE3AQ5TA76 89 aa7.78□□□□□ -1.16
LAMP1-201ENST00000332556 MT1BP07438 61 aa7.75□□□□□ -1.17
LAMP1-201ENST00000332556 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
LAMP1-201ENST00000332556 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
LAMP1-201ENST00000332556 MT1XP80297 61 aa7.67□□□□□ -1.18
LAMP1-201ENST00000332556 KRTAP9-3Q9BYQ3 159 aa7.65□□□□□ -1.18
LAMP1-201ENST00000332556 KMT2DO14686 5537 aa7.61□□□□□ -1.19
LAMP1-201ENST00000332556 KRTAP10-7P60409 375 aaPredicted RBP7.55□□□□□ -1.2
LAMP1-201ENST00000332556 KRTAP10-12P60413 245 aa7.44□□□□□ -1.22
LAMP1-201ENST00000332556 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
LAMP1-201ENST00000332556 FSIP2Q5CZC0 6907 aa7.35□□□□□ -1.23
LAMP1-201ENST00000332556 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
LAMP1-201ENST00000332556 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
LAMP1-201ENST00000332556 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
LAMP1-201ENST00000332556 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
LAMP1-201ENST00000332556 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
LAMP1-201ENST00000332556 INE1O15225 51 aa7.08□□□□□ -1.28
LAMP1-201ENST00000332556 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
LAMP1-201ENST00000332556 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
LAMP1-201ENST00000332556 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
LAMP1-201ENST00000332556 KRTAP19-7Q3SYF9 63 aa6.83□□□□□ -1.32
LAMP1-201ENST00000332556 KRTAP9-6A8MVA2 160 aa6.78□□□□□ -1.32
LAMP1-201ENST00000332556 FCGBPQ9Y6R7 5405 aaPredicted RBP6.75□□□□□ -1.33
LAMP1-201ENST00000332556 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.34
LAMP1-201ENST00000332556 MT1EP04732 61 aa6.61□□□□□ -1.35
LAMP1-201ENST00000332556 MT1LQ93083 61 aa6.59□□□□□ -1.35
LAMP1-201ENST00000332556 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
LAMP1-201ENST00000332556 DSTQ03001 7570 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms