RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
SS18L1-201ENST00000331758 KMT2AQ03164 3969 aa4.78□□□□□ -1.65
SS18L1-201ENST00000331758 FAT1Q14517 4588 aa4.77□□□□□ -1.65
SS18L1-201ENST00000331758 DNAH17Q9UFH2 4485 aa4.76□□□□□ -1.65
SS18L1-201ENST00000331758 ALMS1Q8TCU4 4167 aa4.75□□□□□ -1.65
SS18L1-201ENST00000331758 CMYA5Q8N3K9 4069 aa4.75□□□□□ -1.65
SS18L1-201ENST00000331758 LRP1BQ9NZR2 4599 aa4.73□□□□□ -1.65
SS18L1-201ENST00000331758 DYNC1H1Q14204 4646 aaKnown RBP4.73□□□□□ -1.65
SS18L1-201ENST00000331758 LYSTQ99698 3801 aa4.71□□□□□ -1.66
SS18L1-201ENST00000331758 DNAH2Q9P225 4427 aa4.71□□□□□ -1.66
SS18L1-201ENST00000331758 TNP1P09430 55 aa4.66□□□□□ -1.66
SS18L1-201ENST00000331758 DNAH8Q96JB1 4490 aa4.65□□□□□ -1.66
SS18L1-201ENST00000331758 DYNC2H1Q8NCM8 4307 aaKnown RBP4.63□□□□□ -1.67
SS18L1-201ENST00000331758 DNAH7Q8WXX0 4024 aa4.62□□□□□ -1.67
SS18L1-201ENST00000331758 KIAA1109Q2LD37 5005 aa4.62□□□□□ -1.67
SS18L1-201ENST00000331758 HECTD4Q9Y4D8 3996 aa4.61□□□□□ -1.67
SS18L1-201ENST00000331758 LCE2BO14633 110 aa4.61□□□□□ -1.67
SS18L1-201ENST00000331758 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
SS18L1-201ENST00000331758 RYR1P21817 5038 aa4.6□□□□□ -1.67
SS18L1-201ENST00000331758 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
SS18L1-201ENST00000331758 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
SS18L1-201ENST00000331758 KRTAP13-4Q3LI77 160 aa4.56□□□□□ -1.68
SS18L1-201ENST00000331758 KRTAP12-2P59991 146 aa4.55□□□□□ -1.68
SS18L1-201ENST00000331758 VPS13BQ7Z7G8 4022 aa4.55□□□□□ -1.68
SS18L1-201ENST00000331758 LCE2AQ5TA79 106 aaPredicted RBP4.54□□□□□ -1.68
SS18L1-201ENST00000331758 FAT2Q9NYQ8 4349 aa4.54□□□□□ -1.68
SS18L1-201ENST00000331758 SACSQ9NZJ4 4579 aa4.54□□□□□ -1.68
SS18L1-201ENST00000331758 HYDINQ4G0P3 5121 aa4.53□□□□□ -1.68
SS18L1-201ENST00000331758 RYR3Q15413 4870 aa4.53□□□□□ -1.68
SS18L1-201ENST00000331758 MYCBP2O75592 4640 aa4.52□□□□□ -1.69
SS18L1-201ENST00000331758 PKHD1L1Q86WI1 4243 aa4.52□□□□□ -1.69
SS18L1-201ENST00000331758 KRTAP12-1P59990 96 aa4.5□□□□□ -1.69
SS18L1-201ENST00000331758 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
SS18L1-201ENST00000331758 APOBP04114 4563 aaKnown RBP4.5□□□□□ -1.69
SS18L1-201ENST00000331758 FRAS1Q86XX4 4008 aa4.5□□□□□ -1.69
SS18L1-201ENST00000331758 LRP1Q07954 4544 aaKnown RBP4.48□□□□□ -1.69
SS18L1-201ENST00000331758 PRO2289Q9P1D8 64 aa4.47□□□□□ -1.69
SS18L1-201ENST00000331758 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
SS18L1-201ENST00000331758 PKHD1P08F94 4074 aa4.44□□□□□ -1.7
SS18L1-201ENST00000331758 RYR2Q92736 4967 aa4.43□□□□□ -1.7
SS18L1-201ENST00000331758 FAT3Q8TDW7 4589 aa4.42□□□□□ -1.7
SS18L1-201ENST00000331758 KMT2CQ8NEZ4 4911 aaKnown RBP4.4□□□□□ -1.7
SS18L1-201ENST00000331758 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
SS18L1-201ENST00000331758 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
SS18L1-201ENST00000331758 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
SS18L1-201ENST00000331758 PKD1P98161 4303 aa4.29□□□□□ -1.72
SS18L1-201ENST00000331758 HERC2O95714 4834 aa4.28□□□□□ -1.72
SS18L1-201ENST00000331758 LRP2P98164 4655 aa4.25□□□□□ -1.73
SS18L1-201ENST00000331758 HSPG2P98160 4391 aa4.25□□□□□ -1.73
SS18L1-201ENST00000331758 BIRC6Q9NR09 4857 aa4.19□□□□□ -1.74
SS18L1-201ENST00000331758 TNXBP22105 4242 aa4.19□□□□□ -1.74
SS18L1-201ENST00000331758 EPPK1P58107 5090 aaKnown RBP4.16□□□□□ -1.74
SS18L1-201ENST00000331758 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
SS18L1-201ENST00000331758 MT1HP80294 61 aa4.1□□□□□ -1.75
SS18L1-201ENST00000331758 LPAP08519 4548 aa4.08□□□□□ -1.76
SS18L1-201ENST00000331758 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
SS18L1-201ENST00000331758 MT2AP02795 61 aa4.03□□□□□ -1.76
SS18L1-201ENST00000331758 KRTAP10-12P60413 245 aa4□□□□□ -1.77
SS18L1-201ENST00000331758 MT1FP04733 61 aa3.99□□□□□ -1.77
SS18L1-201ENST00000331758 PCLOQ9Y6V0 5065 aa3.96□□□□□ -1.77
SS18L1-201ENST00000331758 SPRR2GQ9BYE4 73 aa3.96□□□□□ -1.78
SS18L1-201ENST00000331758 HERC1Q15751 4861 aa3.95□□□□□ -1.78
SS18L1-201ENST00000331758 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
SS18L1-201ENST00000331758 INE1O15225 51 aa3.9□□□□□ -1.79
SS18L1-201ENST00000331758 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
SS18L1-201ENST00000331758 KRTAP19-1Q8IUB9 90 aa3.88□□□□□ -1.79
SS18L1-201ENST00000331758 KRTAP19-2Q3LHN2 52 aa3.84□□□□□ -1.8
SS18L1-201ENST00000331758 KRTAP9-8Q9BYQ0 159 aa3.8□□□□□ -1.8
SS18L1-201ENST00000331758 MUC2Q02817 5179 aa3.8□□□□□ -1.8
SS18L1-201ENST00000331758 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
SS18L1-201ENST00000331758 MUC17Q685J3 4493 aa3.78□□□□□ -1.8
SS18L1-201ENST00000331758 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
SS18L1-201ENST00000331758 UBR4Q5T4S7 5183 aa3.72□□□□□ -1.81
SS18L1-201ENST00000331758 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
SS18L1-201ENST00000331758 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.82
SS18L1-201ENST00000331758 MT1BP07438 61 aa3.71□□□□□ -1.82
SS18L1-201ENST00000331758 CRCT1Q9UGL9 99 aa3.7□□□□□ -1.82
SS18L1-201ENST00000331758 HMCN2Q8NDA2 5059 aa3.69□□□□□ -1.82
SS18L1-201ENST00000331758 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
SS18L1-201ENST00000331758 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
SS18L1-201ENST00000331758 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
SS18L1-201ENST00000331758 MT1XP80297 61 aa3.67□□□□□ -1.82
SS18L1-201ENST00000331758 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
SS18L1-201ENST00000331758 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
SS18L1-201ENST00000331758 KRTAP19-5Q3LI72 72 aa3.63□□□□□ -1.83
SS18L1-201ENST00000331758 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
SS18L1-201ENST00000331758 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
SS18L1-201ENST00000331758 KRTAP4-8Q9BYQ9 185 aa3.54□□□□□ -1.84
SS18L1-201ENST00000331758 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
SS18L1-201ENST00000331758 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
SS18L1-201ENST00000331758 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
SS18L1-201ENST00000331758 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
SS18L1-201ENST00000331758 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
SS18L1-201ENST00000331758 KRTAP4-7Q9BYR0 210 aa3.3□□□□□ -1.88
SS18L1-201ENST00000331758 USH2AO75445 5202 aa3.29□□□□□ -1.88
SS18L1-201ENST00000331758 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
SS18L1-201ENST00000331758 MT1GP13640 62 aa3.26□□□□□ -1.89
SS18L1-201ENST00000331758 MT1EP04732 61 aa3.25□□□□□ -1.89
SS18L1-201ENST00000331758 MT1LQ93083 61 aa3.24□□□□□ -1.89
SS18L1-201ENST00000331758 KRTAP9-2Q9BYQ4 174 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms