RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 LRP1Q07954 4544 aaKnown RBP9.74□□□□□ -0.85
PKP3-201ENST00000331563 COX6B2Q6YFQ2 88 aa9.74□□□□□ -0.85
PKP3-201ENST00000331563 C9orf92A6NGG3 77 aa9.73□□□□□ -0.85
PKP3-201ENST00000331563 TPRXLQ17RH7 258 aa9.71□□□□□ -0.85
PKP3-201ENST00000331563 KIAA1109Q2LD37 5005 aa9.68□□□□□ -0.86
PKP3-201ENST00000331563 HSPG2P98160 4391 aa9.67□□□□□ -0.86
PKP3-201ENST00000331563 KRTAP10-4P60372 401 aaPredicted RBP9.67□□□□□ -0.86
PKP3-201ENST00000331563 DMBT1Q9UGM3 2413 aaPredicted RBP9.66□□□□□ -0.86
PKP3-201ENST00000331563 EPPK1P58107 5090 aaKnown RBP9.66□□□□□ -0.86
PKP3-201ENST00000331563 PKHD1L1Q86WI1 4243 aa9.65□□□□□ -0.86
PKP3-201ENST00000331563 A0A0D9SG42 100 aa9.62□□□□□ -0.87
PKP3-201ENST00000331563 RPL37P61927 97 aaKnown RBP9.6□□□□□ -0.87
PKP3-201ENST00000331563 MYCBP2O75592 4640 aa9.58□□□□□ -0.88
PKP3-201ENST00000331563 C10orf95Q9H7T3 257 aa9.57□□□□□ -0.88
PKP3-201ENST00000331563 RYR1P21817 5038 aa9.56□□□□□ -0.88
PKP3-201ENST00000331563 KRTAP17-1Q9BYP8 105 aa9.55□□□□□ -0.88
PKP3-201ENST00000331563 Q5VSD8 79 aa9.47□□□□□ -0.89
PKP3-201ENST00000331563 TNXBP22105 4242 aa9.47□□□□□ -0.89
PKP3-201ENST00000331563 RPS29P62273 56 aaKnown RBP9.45□□□□□ -0.9
PKP3-201ENST00000331563 KRTAP13-4Q3LI77 160 aa9.44□□□□□ -0.9
PKP3-201ENST00000331563 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
PKP3-201ENST00000331563 LUZP6Q538Z0 58 aa9.37□□□□□ -0.91
PKP3-201ENST00000331563 FAT3Q8TDW7 4589 aa9.37□□□□□ -0.91
PKP3-201ENST00000331563 S4R3F8 94 aa9.28□□□□□ -0.92
PKP3-201ENST00000331563 KRTAP3-3Q9BYR6 98 aa9.26□□□□□ -0.93
PKP3-201ENST00000331563 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
PKP3-201ENST00000331563 KRTAP3-2Q9BYR7 98 aa9.26□□□□□ -0.93
PKP3-201ENST00000331563 KRTAP12-2P59991 146 aa9.22□□□□□ -0.93
PKP3-201ENST00000331563 KRTAP4-5Q9BYR2 181 aa9.2□□□□□ -0.94
PKP3-201ENST00000331563 ABCA13Q86UQ4 5058 aa9.19□□□□□ -0.94
PKP3-201ENST00000331563 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
PKP3-201ENST00000331563 XP32Q5T750 250 aa9.1□□□□□ -0.95
PKP3-201ENST00000331563 LPAP08519 4548 aa9.1□□□□□ -0.95
PKP3-201ENST00000331563 LRP2P98164 4655 aa9.08□□□□□ -0.96
PKP3-201ENST00000331563 KRTAP12-1P59990 96 aa9.06□□□□□ -0.96
PKP3-201ENST00000331563 HERC2O95714 4834 aa9.04□□□□□ -0.96
PKP3-201ENST00000331563 PLAC4Q8WY50 150 aa8.91□□□□□ -0.98
PKP3-201ENST00000331563 BIRC6Q9NR09 4857 aa8.89□□□□□ -0.99
PKP3-201ENST00000331563 M0QZ58 72 aa8.86□□□□□ -0.99
PKP3-201ENST00000331563 PCLOQ9Y6V0 5065 aa8.78□□□□□ -1
PKP3-201ENST00000331563 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
PKP3-201ENST00000331563 HERC1Q15751 4861 aa8.77□□□□□ -1.01
PKP3-201ENST00000331563 J3QL48 77 aa8.75□□□□□ -1.01
PKP3-201ENST00000331563 MUC2Q02817 5179 aa8.71□□□□□ -1.02
PKP3-201ENST00000331563 R4GN34 69 aa8.65□□□□□ -1.03
PKP3-201ENST00000331563 MUC17Q685J3 4493 aa8.5□□□□□ -1.05
PKP3-201ENST00000331563 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
PKP3-201ENST00000331563 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
PKP3-201ENST00000331563 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
PKP3-201ENST00000331563 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
PKP3-201ENST00000331563 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
PKP3-201ENST00000331563 RNF213Q63HN8 5207 aa8.31□□□□□ -1.08
PKP3-201ENST00000331563 FAT4Q6V0I7 4981 aa8.27□□□□□ -1.09
PKP3-201ENST00000331563 UBR4Q5T4S7 5183 aa8.27□□□□□ -1.09
PKP3-201ENST00000331563 PRO2289Q9P1D8 64 aa8.18□□□□□ -1.1
PKP3-201ENST00000331563 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.11
PKP3-201ENST00000331563 SPRR5A0A1B0GTR4 108 aa8.12□□□□□ -1.11
PKP3-201ENST00000331563 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
PKP3-201ENST00000331563 TNP1P09430 55 aa8□□□□□ -1.13
PKP3-201ENST00000331563 INE1O15225 51 aa7.88□□□□□ -1.15
PKP3-201ENST00000331563 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
PKP3-201ENST00000331563 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
PKP3-201ENST00000331563 M0R2T5 61 aa7.75□□□□□ -1.17
PKP3-201ENST00000331563 MT1HP80294 61 aa7.68□□□□□ -1.18
PKP3-201ENST00000331563 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
PKP3-201ENST00000331563 MT1FP04733 61 aa7.47□□□□□ -1.21
PKP3-201ENST00000331563 KRTAP10-10P60014 251 aa7.47□□□□□ -1.21
PKP3-201ENST00000331563 MT2AP02795 61 aa7.45□□□□□ -1.22
PKP3-201ENST00000331563 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
PKP3-201ENST00000331563 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
PKP3-201ENST00000331563 SPRR2GQ9BYE4 73 aa7.34□□□□□ -1.23
PKP3-201ENST00000331563 USH2AO75445 5202 aa7.26□□□□□ -1.25
PKP3-201ENST00000331563 KRTAP8-1Q8IUC2 63 aa7.18□□□□□ -1.26
PKP3-201ENST00000331563 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
PKP3-201ENST00000331563 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
PKP3-201ENST00000331563 MT1BP07438 61 aa7.09□□□□□ -1.27
PKP3-201ENST00000331563 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
PKP3-201ENST00000331563 KRTAP19-8Q3LI54 63 aa7.05□□□□□ -1.28
PKP3-201ENST00000331563 FSIP2Q5CZC0 6907 aa7.05□□□□□ -1.28
PKP3-201ENST00000331563 LCE2BO14633 110 aa6.98□□□□□ -1.29
PKP3-201ENST00000331563 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
PKP3-201ENST00000331563 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
PKP3-201ENST00000331563 MT1XP80297 61 aa6.95□□□□□ -1.3
PKP3-201ENST00000331563 KMT2DO14686 5537 aa6.91□□□□□ -1.3
PKP3-201ENST00000331563 KRTAP10-7P60409 375 aaPredicted RBP6.8□□□□□ -1.32
PKP3-201ENST00000331563 SSPOA2VEC9 5147 aa6.71□□□□□ -1.33
PKP3-201ENST00000331563 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
PKP3-201ENST00000331563 KRTAP19-5Q3LI72 72 aa6.61□□□□□ -1.35
PKP3-201ENST00000331563 KRTAP4-8A0A0G2JLE6 195 aa6.56□□□□□ -1.36
PKP3-201ENST00000331563 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
PKP3-201ENST00000331563 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
PKP3-201ENST00000331563 KRTAP2-3P0C7H8 128 aa6.45□□□□□ -1.38
PKP3-201ENST00000331563 KRTAP2-4Q9BYR9 128 aa6.45□□□□□ -1.38
PKP3-201ENST00000331563 KRTAP2-1Q9BYU5 128 aa6.45□□□□□ -1.38
PKP3-201ENST00000331563 FCGBPQ9Y6R7 5405 aaPredicted RBP6.32□□□□□ -1.4
PKP3-201ENST00000331563 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
PKP3-201ENST00000331563 KRTAP19-6Q3LI70 58 aa6.28□□□□□ -1.4
PKP3-201ENST00000331563 MUC12Q9UKN1 5478 aa6.21□□□□□ -1.42
PKP3-201ENST00000331563 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
PKP3-201ENST00000331563 LCE2DQ5TA82 110 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms