RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
EFCAB13-201ENST00000331493 KRTAP10-8P60410 259 aa6.11□□□□□ -1.43
EFCAB13-201ENST00000331493 XP32Q5T750 250 aa6.08□□□□□ -1.44
EFCAB13-201ENST00000331493 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
EFCAB13-201ENST00000331493 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
EFCAB13-201ENST00000331493 HSPG2P98160 4391 aa6.06□□□□□ -1.44
EFCAB13-201ENST00000331493 KRTAP21-3Q3LHN1 58 aa6.06□□□□□ -1.44
EFCAB13-201ENST00000331493 P0C880 135 aa6.05□□□□□ -1.44
EFCAB13-201ENST00000331493 KIAA1109Q2LD37 5005 aa6.05□□□□□ -1.44
EFCAB13-201ENST00000331493 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
EFCAB13-201ENST00000331493 RYR2Q92736 4967 aa6□□□□□ -1.45
EFCAB13-201ENST00000331493 ROMO1P60602 79 aa6□□□□□ -1.45
EFCAB13-201ENST00000331493 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
EFCAB13-201ENST00000331493 PKHD1L1Q86WI1 4243 aa5.99□□□□□ -1.45
EFCAB13-201ENST00000331493 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
EFCAB13-201ENST00000331493 KRTAP3-3Q9BYR6 98 aa5.97□□□□□ -1.45
EFCAB13-201ENST00000331493 RYR3Q15413 4870 aa5.97□□□□□ -1.45
EFCAB13-201ENST00000331493 H3BS24 57 aa5.97□□□□□ -1.45
EFCAB13-201ENST00000331493 RYR1P21817 5038 aa5.96□□□□□ -1.46
EFCAB13-201ENST00000331493 LRP2P98164 4655 aa5.95□□□□□ -1.46
EFCAB13-201ENST00000331493 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
EFCAB13-201ENST00000331493 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.47
EFCAB13-201ENST00000331493 LPAP08519 4548 aa5.87□□□□□ -1.47
EFCAB13-201ENST00000331493 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
EFCAB13-201ENST00000331493 M0QZ58 72 aa5.85□□□□□ -1.47
EFCAB13-201ENST00000331493 TNXBP22105 4242 aa5.84□□□□□ -1.47
EFCAB13-201ENST00000331493 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
EFCAB13-201ENST00000331493 J3QL48 77 aa5.84□□□□□ -1.47
EFCAB13-201ENST00000331493 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
EFCAB13-201ENST00000331493 R4GN34 69 aa5.82□□□□□ -1.48
EFCAB13-201ENST00000331493 KRTAP4-5Q9BYR2 181 aa5.77□□□□□ -1.49
EFCAB13-201ENST00000331493 KRTAP12-1P59990 96 aa5.75□□□□□ -1.49
EFCAB13-201ENST00000331493 EPPK1P58107 5090 aaKnown RBP5.72□□□□□ -1.49
EFCAB13-201ENST00000331493 ABCA13Q86UQ4 5058 aa5.71□□□□□ -1.5
EFCAB13-201ENST00000331493 LCE2DQ5TA82 110 aaPredicted RBP5.7□□□□□ -1.5
EFCAB13-201ENST00000331493 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
EFCAB13-201ENST00000331493 NDUFAF8A1L188 74 aa5.66□□□□□ -1.5
EFCAB13-201ENST00000331493 CAMK2N1Q7Z7J9 78 aa5.64□□□□□ -1.51
EFCAB13-201ENST00000331493 LORP23490 312 aaPredicted RBP5.61□□□□□ -1.51
EFCAB13-201ENST00000331493 MUC2Q02817 5179 aa5.58□□□□□ -1.52
EFCAB13-201ENST00000331493 KRTAP4-1Q9BYQ7 146 aa5.53□□□□□ -1.52
EFCAB13-201ENST00000331493 HERC2O95714 4834 aa5.52□□□□□ -1.53
EFCAB13-201ENST00000331493 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
EFCAB13-201ENST00000331493 M0R2T5 61 aa5.42□□□□□ -1.54
EFCAB13-201ENST00000331493 PLAC4Q8WY50 150 aa5.39□□□□□ -1.55
EFCAB13-201ENST00000331493 HERC1Q15751 4861 aa5.33□□□□□ -1.56
EFCAB13-201ENST00000331493 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
EFCAB13-201ENST00000331493 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
EFCAB13-201ENST00000331493 LUZP6Q538Z0 58 aa5.31□□□□□ -1.56
EFCAB13-201ENST00000331493 TNP1P09430 55 aa5.24□□□□□ -1.57
EFCAB13-201ENST00000331493 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
EFCAB13-201ENST00000331493 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
EFCAB13-201ENST00000331493 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.59
EFCAB13-201ENST00000331493 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
EFCAB13-201ENST00000331493 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
EFCAB13-201ENST00000331493 KRTAP10-10P60014 251 aa5.13□□□□□ -1.59
EFCAB13-201ENST00000331493 UBR4Q5T4S7 5183 aa5.07□□□□□ -1.6
EFCAB13-201ENST00000331493 BIRC6Q9NR09 4857 aa5.07□□□□□ -1.6
EFCAB13-201ENST00000331493 HMCN2Q8NDA2 5059 aa5□□□□□ -1.61
EFCAB13-201ENST00000331493 A0A0A0MQY5 61 aa5□□□□□ -1.61
EFCAB13-201ENST00000331493 LCE2CQ5TA81 110 aa4.93□□□□□ -1.62
EFCAB13-201ENST00000331493 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
EFCAB13-201ENST00000331493 KRTAP19-1Q8IUB9 90 aa4.92□□□□□ -1.62
EFCAB13-201ENST00000331493 MT1HP80294 61 aa4.91□□□□□ -1.62
EFCAB13-201ENST00000331493 MT1FP04733 61 aa4.9□□□□□ -1.63
EFCAB13-201ENST00000331493 MT2AP02795 61 aa4.86□□□□□ -1.63
EFCAB13-201ENST00000331493 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
EFCAB13-201ENST00000331493 LCE2BO14633 110 aa4.78□□□□□ -1.64
EFCAB13-201ENST00000331493 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
EFCAB13-201ENST00000331493 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
EFCAB13-201ENST00000331493 USH2AO75445 5202 aa4.71□□□□□ -1.66
EFCAB13-201ENST00000331493 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
EFCAB13-201ENST00000331493 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
EFCAB13-201ENST00000331493 MT1BP07438 61 aa4.65□□□□□ -1.66
EFCAB13-201ENST00000331493 MT1XP80297 61 aa4.64□□□□□ -1.67
EFCAB13-201ENST00000331493 KMT2DO14686 5537 aa4.64□□□□□ -1.67
EFCAB13-201ENST00000331493 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
EFCAB13-201ENST00000331493 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
EFCAB13-201ENST00000331493 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
EFCAB13-201ENST00000331493 FSIP2Q5CZC0 6907 aa4.6□□□□□ -1.67
EFCAB13-201ENST00000331493 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
EFCAB13-201ENST00000331493 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.68
EFCAB13-201ENST00000331493 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
EFCAB13-201ENST00000331493 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
EFCAB13-201ENST00000331493 KRTAP19-5Q3LI72 72 aa4.47□□□□□ -1.69
EFCAB13-201ENST00000331493 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
EFCAB13-201ENST00000331493 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.7
EFCAB13-201ENST00000331493 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.7
EFCAB13-201ENST00000331493 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
EFCAB13-201ENST00000331493 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
EFCAB13-201ENST00000331493 INE1O15225 51 aa4.24□□□□□ -1.73
EFCAB13-201ENST00000331493 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
EFCAB13-201ENST00000331493 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
EFCAB13-201ENST00000331493 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
EFCAB13-201ENST00000331493 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
EFCAB13-201ENST00000331493 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
EFCAB13-201ENST00000331493 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
EFCAB13-201ENST00000331493 KRTAP19-7Q3SYF9 63 aa4.11□□□□□ -1.75
EFCAB13-201ENST00000331493 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
EFCAB13-201ENST00000331493 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms