RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 COX6B2Q6YFQ2 88 aa4.65□□□□□ -1.67
CPNE8-201ENST00000331366 LRP1Q07954 4544 aaKnown RBP4.64□□□□□ -1.67
CPNE8-201ENST00000331366 H1FX-AS1Q4G0G2 97 aa4.64□□□□□ -1.67
CPNE8-201ENST00000331366 KRTAP10-8P60410 259 aa4.62□□□□□ -1.67
CPNE8-201ENST00000331366 KRTAP3-3Q9BYR6 98 aa4.6□□□□□ -1.67
CPNE8-201ENST00000331366 RYR2Q92736 4967 aa4.57□□□□□ -1.68
CPNE8-201ENST00000331366 KRTAP10-6P60371 365 aaPredicted RBP4.56□□□□□ -1.68
CPNE8-201ENST00000331366 RPL37P61927 97 aaKnown RBP4.56□□□□□ -1.68
CPNE8-201ENST00000331366 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
CPNE8-201ENST00000331366 KRTAP3-2Q9BYR7 98 aa4.56□□□□□ -1.68
CPNE8-201ENST00000331366 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
CPNE8-201ENST00000331366 A0A1B0GU33 70 aa4.55□□□□□ -1.68
CPNE8-201ENST00000331366 XP32Q5T750 250 aa4.51□□□□□ -1.69
CPNE8-201ENST00000331366 Q8N1X5 172 aa4.49□□□□□ -1.69
CPNE8-201ENST00000331366 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
CPNE8-201ENST00000331366 MYCBP2O75592 4640 aa4.45□□□□□ -1.7
CPNE8-201ENST00000331366 KIAA1109Q2LD37 5005 aa4.44□□□□□ -1.7
CPNE8-201ENST00000331366 C9orf92A6NGG3 77 aa4.42□□□□□ -1.7
CPNE8-201ENST00000331366 TPRXLQ17RH7 258 aa4.4□□□□□ -1.7
CPNE8-201ENST00000331366 MT1HL1P0DM35 61 aa4.4□□□□□ -1.71
CPNE8-201ENST00000331366 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
CPNE8-201ENST00000331366 A0A0D9SG42 100 aa4.37□□□□□ -1.71
CPNE8-201ENST00000331366 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
CPNE8-201ENST00000331366 S4R3F8 94 aa4.37□□□□□ -1.71
CPNE8-201ENST00000331366 RYR1P21817 5038 aa4.37□□□□□ -1.71
CPNE8-201ENST00000331366 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
CPNE8-201ENST00000331366 M0QZ58 72 aa4.36□□□□□ -1.71
CPNE8-201ENST00000331366 Q5VSD8 79 aa4.36□□□□□ -1.71
CPNE8-201ENST00000331366 SEC61BP60468 96 aaKnown RBP4.35□□□□□ -1.71
CPNE8-201ENST00000331366 RYR3Q15413 4870 aa4.34□□□□□ -1.71
CPNE8-201ENST00000331366 KRTAP12-1P59990 96 aa4.3□□□□□ -1.72
CPNE8-201ENST00000331366 EPPK1P58107 5090 aaKnown RBP4.29□□□□□ -1.72
CPNE8-201ENST00000331366 J3QL48 77 aa4.28□□□□□ -1.72
CPNE8-201ENST00000331366 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
CPNE8-201ENST00000331366 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
CPNE8-201ENST00000331366 KRTAP17-1Q9BYP8 105 aa4.25□□□□□ -1.73
CPNE8-201ENST00000331366 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
CPNE8-201ENST00000331366 KRTAP4-5Q9BYR2 181 aa4.23□□□□□ -1.73
CPNE8-201ENST00000331366 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
CPNE8-201ENST00000331366 HERC1Q15751 4861 aa4.17□□□□□ -1.74
CPNE8-201ENST00000331366 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
CPNE8-201ENST00000331366 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.76
CPNE8-201ENST00000331366 HERC2O95714 4834 aa4.08□□□□□ -1.76
CPNE8-201ENST00000331366 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
CPNE8-201ENST00000331366 MUC2Q02817 5179 aa4.07□□□□□ -1.76
CPNE8-201ENST00000331366 LRP2P98164 4655 aa4.07□□□□□ -1.76
CPNE8-201ENST00000331366 BIRC6Q9NR09 4857 aa4.05□□□□□ -1.76
CPNE8-201ENST00000331366 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
CPNE8-201ENST00000331366 ABCA13Q86UQ4 5058 aa4.05□□□□□ -1.76
CPNE8-201ENST00000331366 LPAP08519 4548 aa4.02□□□□□ -1.77
CPNE8-201ENST00000331366 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
CPNE8-201ENST00000331366 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
CPNE8-201ENST00000331366 PCLOQ9Y6V0 5065 aa4□□□□□ -1.77
CPNE8-201ENST00000331366 KRTAP4-1Q9BYQ7 146 aa3.98□□□□□ -1.77
CPNE8-201ENST00000331366 UBR4Q5T4S7 5183 aa3.93□□□□□ -1.78
CPNE8-201ENST00000331366 LORP23490 312 aaPredicted RBP3.91□□□□□ -1.78
CPNE8-201ENST00000331366 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
CPNE8-201ENST00000331366 R4GN34 69 aa3.9□□□□□ -1.79
CPNE8-201ENST00000331366 M0R2T5 61 aa3.87□□□□□ -1.79
CPNE8-201ENST00000331366 FAT4Q6V0I7 4981 aa3.87□□□□□ -1.79
CPNE8-201ENST00000331366 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
CPNE8-201ENST00000331366 LCE2CQ5TA81 110 aa3.85□□□□□ -1.79
CPNE8-201ENST00000331366 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
CPNE8-201ENST00000331366 KRTAP19-8Q3LI54 63 aa3.79□□□□□ -1.8
CPNE8-201ENST00000331366 KRTAP19-1Q8IUB9 90 aa3.75□□□□□ -1.81
CPNE8-201ENST00000331366 TNP1P09430 55 aa3.75□□□□□ -1.81
CPNE8-201ENST00000331366 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
CPNE8-201ENST00000331366 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
CPNE8-201ENST00000331366 INE1O15225 51 aa3.67□□□□□ -1.82
CPNE8-201ENST00000331366 KRTAP9-8Q9BYQ0 159 aa3.64□□□□□ -1.83
CPNE8-201ENST00000331366 MT1HP80294 61 aa3.63□□□□□ -1.83
CPNE8-201ENST00000331366 KRTAP19-4Q3LI73 84 aa3.6□□□□□ -1.83
CPNE8-201ENST00000331366 MT2AP02795 61 aa3.59□□□□□ -1.83
CPNE8-201ENST00000331366 MT1BP07438 61 aa3.56□□□□□ -1.84
CPNE8-201ENST00000331366 USH2AO75445 5202 aa3.56□□□□□ -1.84
CPNE8-201ENST00000331366 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
CPNE8-201ENST00000331366 MT1FP04733 61 aa3.54□□□□□ -1.84
CPNE8-201ENST00000331366 MT1XP80297 61 aa3.54□□□□□ -1.84
CPNE8-201ENST00000331366 KRTAP10-10P60014 251 aa3.52□□□□□ -1.85
CPNE8-201ENST00000331366 KRTAP9-3Q9BYQ3 159 aa3.5□□□□□ -1.85
CPNE8-201ENST00000331366 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
CPNE8-201ENST00000331366 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
CPNE8-201ENST00000331366 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
CPNE8-201ENST00000331366 KMT2DO14686 5537 aa3.3□□□□□ -1.88
CPNE8-201ENST00000331366 LCE2AQ5TA79 106 aaPredicted RBP3.3□□□□□ -1.88
CPNE8-201ENST00000331366 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
CPNE8-201ENST00000331366 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
CPNE8-201ENST00000331366 KRTAP2-3P0C7H8 128 aa3.26□□□□□ -1.89
CPNE8-201ENST00000331366 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
CPNE8-201ENST00000331366 KRTAP2-4Q9BYR9 128 aa3.26□□□□□ -1.89
CPNE8-201ENST00000331366 KRTAP2-1Q9BYU5 128 aa3.26□□□□□ -1.89
CPNE8-201ENST00000331366 LCE2BO14633 110 aa3.22□□□□□ -1.89
CPNE8-201ENST00000331366 KRTAP19-5Q3LI72 72 aa3.21□□□□□ -1.89
CPNE8-201ENST00000331366 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
CPNE8-201ENST00000331366 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
CPNE8-201ENST00000331366 MT1EP04732 61 aa3.13□□□□□ -1.91
CPNE8-201ENST00000331366 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
CPNE8-201ENST00000331366 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
CPNE8-201ENST00000331366 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
CPNE8-201ENST00000331366 KRTAP19-6Q3LI70 58 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms