RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 KIAA1109Q2LD37 5005 aa7.59□□□□□ -1.19
SNX20-202ENST00000330943 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
SNX20-202ENST00000330943 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
SNX20-202ENST00000330943 A0A1B0GVY2 172 aa7.51□□□□□ -1.21
SNX20-202ENST00000330943 A0A0D9SG42 100 aa7.5□□□□□ -1.21
SNX20-202ENST00000330943 RPL37P61927 97 aaKnown RBP7.5□□□□□ -1.21
SNX20-202ENST00000330943 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
SNX20-202ENST00000330943 KRTAP10-6P60371 365 aaPredicted RBP7.48□□□□□ -1.21
SNX20-202ENST00000330943 HSPG2P98160 4391 aa7.48□□□□□ -1.21
SNX20-202ENST00000330943 EPPK1P58107 5090 aaKnown RBP7.46□□□□□ -1.22
SNX20-202ENST00000330943 P0C880 135 aa7.45□□□□□ -1.22
SNX20-202ENST00000330943 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
SNX20-202ENST00000330943 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
SNX20-202ENST00000330943 KRTAP17-1Q9BYP8 105 aa7.41□□□□□ -1.22
SNX20-202ENST00000330943 TPRXLQ17RH7 258 aa7.4□□□□□ -1.22
SNX20-202ENST00000330943 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.23
SNX20-202ENST00000330943 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
SNX20-202ENST00000330943 RYR1P21817 5038 aa7.38□□□□□ -1.23
SNX20-202ENST00000330943 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
SNX20-202ENST00000330943 S4R3F8 94 aa7.36□□□□□ -1.23
SNX20-202ENST00000330943 TNXBP22105 4242 aa7.34□□□□□ -1.23
SNX20-202ENST00000330943 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
SNX20-202ENST00000330943 Q5VSD8 79 aa7.33□□□□□ -1.24
SNX20-202ENST00000330943 LPAP08519 4548 aa7.32□□□□□ -1.24
SNX20-202ENST00000330943 ABCA13Q86UQ4 5058 aa7.28□□□□□ -1.24
SNX20-202ENST00000330943 KRTAP12-2P59991 146 aa7.27□□□□□ -1.25
SNX20-202ENST00000330943 LRP2P98164 4655 aa7.25□□□□□ -1.25
SNX20-202ENST00000330943 XP32Q5T750 250 aa7.24□□□□□ -1.25
SNX20-202ENST00000330943 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
SNX20-202ENST00000330943 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
SNX20-202ENST00000330943 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
SNX20-202ENST00000330943 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
SNX20-202ENST00000330943 MUC2Q02817 5179 aa7.05□□□□□ -1.28
SNX20-202ENST00000330943 M0QZ58 72 aa7.04□□□□□ -1.28
SNX20-202ENST00000330943 A0A0A0MQY5 61 aa7.03□□□□□ -1.28
SNX20-202ENST00000330943 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
SNX20-202ENST00000330943 HERC2O95714 4834 aa6.98□□□□□ -1.29
SNX20-202ENST00000330943 HERC1Q15751 4861 aa6.87□□□□□ -1.31
SNX20-202ENST00000330943 R4GN34 69 aa6.87□□□□□ -1.31
SNX20-202ENST00000330943 PCLOQ9Y6V0 5065 aa6.78□□□□□ -1.32
SNX20-202ENST00000330943 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
SNX20-202ENST00000330943 J3QL48 77 aa6.74□□□□□ -1.33
SNX20-202ENST00000330943 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
SNX20-202ENST00000330943 RNF213Q63HN8 5207 aa6.68□□□□□ -1.34
SNX20-202ENST00000330943 FAT4Q6V0I7 4981 aa6.68□□□□□ -1.34
SNX20-202ENST00000330943 LUZP6Q538Z0 58 aa6.65□□□□□ -1.34
SNX20-202ENST00000330943 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
SNX20-202ENST00000330943 MUC17Q685J3 4493 aa6.62□□□□□ -1.35
SNX20-202ENST00000330943 BIRC6Q9NR09 4857 aa6.62□□□□□ -1.35
SNX20-202ENST00000330943 CAMK2N1Q7Z7J9 78 aa6.57□□□□□ -1.36
SNX20-202ENST00000330943 SEC61BP60468 96 aaKnown RBP6.56□□□□□ -1.36
SNX20-202ENST00000330943 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
SNX20-202ENST00000330943 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
SNX20-202ENST00000330943 HMCN2Q8NDA2 5059 aa6.45□□□□□ -1.38
SNX20-202ENST00000330943 KRTAP19-2Q3LHN2 52 aa6.39□□□□□ -1.39
SNX20-202ENST00000330943 TNP1P09430 55 aa6.32□□□□□ -1.4
SNX20-202ENST00000330943 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
SNX20-202ENST00000330943 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
SNX20-202ENST00000330943 SPRR5A0A1B0GTR4 108 aa6.19□□□□□ -1.42
SNX20-202ENST00000330943 M0R2T5 61 aa6.12□□□□□ -1.43
SNX20-202ENST00000330943 LCE2CQ5TA81 110 aa6.04□□□□□ -1.44
SNX20-202ENST00000330943 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
SNX20-202ENST00000330943 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
SNX20-202ENST00000330943 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.46
SNX20-202ENST00000330943 USH2AO75445 5202 aa5.95□□□□□ -1.46
SNX20-202ENST00000330943 MT1HP80294 61 aa5.91□□□□□ -1.46
SNX20-202ENST00000330943 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
SNX20-202ENST00000330943 MT1FP04733 61 aa5.83□□□□□ -1.48
SNX20-202ENST00000330943 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
SNX20-202ENST00000330943 MT2AP02795 61 aa5.78□□□□□ -1.48
SNX20-202ENST00000330943 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
SNX20-202ENST00000330943 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
SNX20-202ENST00000330943 KRTAP9-8Q9BYQ0 159 aa5.73□□□□□ -1.49
SNX20-202ENST00000330943 KMT2DO14686 5537 aa5.71□□□□□ -1.5
SNX20-202ENST00000330943 INE1O15225 51 aa5.67□□□□□ -1.5
SNX20-202ENST00000330943 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
SNX20-202ENST00000330943 KRTAP10-5P60370 271 aa5.65□□□□□ -1.5
SNX20-202ENST00000330943 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.51
SNX20-202ENST00000330943 MT1XP80297 61 aa5.64□□□□□ -1.51
SNX20-202ENST00000330943 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
SNX20-202ENST00000330943 MT1BP07438 61 aa5.61□□□□□ -1.51
SNX20-202ENST00000330943 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
SNX20-202ENST00000330943 KRTAP9-3Q9BYQ3 159 aa5.46□□□□□ -1.54
SNX20-202ENST00000330943 LCE2BO14633 110 aa5.4□□□□□ -1.55
SNX20-202ENST00000330943 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
SNX20-202ENST00000330943 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
SNX20-202ENST00000330943 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
SNX20-202ENST00000330943 SSPOA2VEC9 5147 aa5.26□□□□□ -1.57
SNX20-202ENST00000330943 KRTAP4-8A0A0G2JLE6 195 aa5.24□□□□□ -1.57
SNX20-202ENST00000330943 KRTAP4-8Q9BYQ9 185 aa5.24□□□□□ -1.57
SNX20-202ENST00000330943 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
SNX20-202ENST00000330943 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
SNX20-202ENST00000330943 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
SNX20-202ENST00000330943 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
SNX20-202ENST00000330943 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
SNX20-202ENST00000330943 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
SNX20-202ENST00000330943 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
SNX20-202ENST00000330943 FCGBPQ9Y6R7 5405 aaPredicted RBP5.05□□□□□ -1.6
SNX20-202ENST00000330943 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
SNX20-202ENST00000330943 MT1LQ93083 61 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms