RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 Q8N9L7 120 aa7.01□□□□□ -1.29
CTHRC1-201ENST00000330295 KRTAP3-1Q9BYR8 98 aa7.01□□□□□ -1.29
CTHRC1-201ENST00000330295 HCG22E2RYF7 251 aa6.97□□□□□ -1.29
CTHRC1-201ENST00000330295 CXCL6P80162 114 aa6.96□□□□□ -1.3
CTHRC1-201ENST00000330295 SPRR2EP22531 72 aa6.95□□□□□ -1.3
CTHRC1-201ENST00000330295 SPRR2BP35325 72 aa6.95□□□□□ -1.3
CTHRC1-201ENST00000330295 SPRR2AP35326 72 aa6.95□□□□□ -1.3
CTHRC1-201ENST00000330295 ACYP1P07311 99 aa6.94□□□□□ -1.3
CTHRC1-201ENST00000330295 IGKV2D-30A0A075B6S6 120 aa6.93□□□□□ -1.3
CTHRC1-201ENST00000330295 IGKV2-30P06310 120 aa6.93□□□□□ -1.3
CTHRC1-201ENST00000330295 C7orf65Q6ZTY9 151 aa6.93□□□□□ -1.3
CTHRC1-201ENST00000330295 Q5W150 140 aa6.89□□□□□ -1.31
CTHRC1-201ENST00000330295 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
CTHRC1-201ENST00000330295 FAM240AA0A1B0GVK7 77 aa6.87□□□□□ -1.31
CTHRC1-201ENST00000330295 ATP5EP2Q5VTU8 51 aa6.85□□□□□ -1.31
CTHRC1-201ENST00000330295 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
CTHRC1-201ENST00000330295 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
CTHRC1-201ENST00000330295 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
CTHRC1-201ENST00000330295 MT1BP07438 61 aa6.8□□□□□ -1.32
CTHRC1-201ENST00000330295 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
CTHRC1-201ENST00000330295 A0A1B0GV90 55 aa6.77□□□□□ -1.33
CTHRC1-201ENST00000330295 C4orf26Q17RF5 130 aa6.76□□□□□ -1.33
CTHRC1-201ENST00000330295 LINC00643Q86TS7 51 aa6.75□□□□□ -1.33
CTHRC1-201ENST00000330295 J3QR89 54 aa6.74□□□□□ -1.33
CTHRC1-201ENST00000330295 SPRR2DP22532 72 aa6.73□□□□□ -1.33
CTHRC1-201ENST00000330295 LCE1AQ5T7P2 110 aa6.73□□□□□ -1.33
CTHRC1-201ENST00000330295 Q5VV11 94 aa6.72□□□□□ -1.33
CTHRC1-201ENST00000330295 TRAV22A0A0B4J277 110 aa6.7□□□□□ -1.34
CTHRC1-201ENST00000330295 LOC101927531A0A1B0GV80 90 aa6.69□□□□□ -1.34
CTHRC1-201ENST00000330295 UQCRQO14949 82 aa6.69□□□□□ -1.34
CTHRC1-201ENST00000330295 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
CTHRC1-201ENST00000330295 ATOX1O00244 68 aa6.67□□□□□ -1.34
CTHRC1-201ENST00000330295 CYP4F30PQ9H0H9 118 aa6.65□□□□□ -1.34
CTHRC1-201ENST00000330295 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
CTHRC1-201ENST00000330295 S4R3F8 94 aa6.63□□□□□ -1.35
CTHRC1-201ENST00000330295 H0Y9P7 68 aa6.62□□□□□ -1.35
CTHRC1-201ENST00000330295 A0A087WVE0 104 aa6.61□□□□□ -1.35
CTHRC1-201ENST00000330295 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
CTHRC1-201ENST00000330295 C5orf47Q569G3 176 aa6.59□□□□□ -1.35
CTHRC1-201ENST00000330295 MP68P56378 58 aa6.57□□□□□ -1.36
CTHRC1-201ENST00000330295 SCGB1A1P11684 91 aa6.54□□□□□ -1.36
CTHRC1-201ENST00000330295 FAM236AA0A1B0GUQ0 79 aa6.53□□□□□ -1.36
CTHRC1-201ENST00000330295 FAM236BA0A1B0GV22 79 aa6.53□□□□□ -1.36
CTHRC1-201ENST00000330295 LCA10Q71F78 164 aa6.53□□□□□ -1.36
CTHRC1-201ENST00000330295 LINC00208Q96KT6 92 aa6.53□□□□□ -1.36
CTHRC1-201ENST00000330295 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
CTHRC1-201ENST00000330295 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
CTHRC1-201ENST00000330295 DSTQ03001 7570 aaKnown RBP6.5□□□□□ -1.37
CTHRC1-201ENST00000330295 OCR1Q9BZK8 76 aa6.5□□□□□ -1.37
CTHRC1-201ENST00000330295 K7ERU9 68 aa6.49□□□□□ -1.37
CTHRC1-201ENST00000330295 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
CTHRC1-201ENST00000330295 A8MUN3 132 aa6.48□□□□□ -1.37
CTHRC1-201ENST00000330295 H3BPC8 53 aa6.48□□□□□ -1.37
CTHRC1-201ENST00000330295 NDUFC1O43677 76 aa6.45□□□□□ -1.38
CTHRC1-201ENST00000330295 KLKP1Q107X0 134 aa6.4□□□□□ -1.38
CTHRC1-201ENST00000330295 SMIM20Q8N5G0 67 aa6.39□□□□□ -1.39
CTHRC1-201ENST00000330295 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
CTHRC1-201ENST00000330295 KRTAP15-1Q3LI76 137 aa6.35□□□□□ -1.39
CTHRC1-201ENST00000330295 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
CTHRC1-201ENST00000330295 TRAV7A0A075B6U4 112 aa6.31□□□□□ -1.4
CTHRC1-201ENST00000330295 H0YAA0 97 aa6.31□□□□□ -1.4
CTHRC1-201ENST00000330295 DMAC1Q96GE9 116 aa6.27□□□□□ -1.41
CTHRC1-201ENST00000330295 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
CTHRC1-201ENST00000330295 ADM2Q7Z4H4 148 aa6.23□□□□□ -1.41
CTHRC1-201ENST00000330295 C20orf197Q8N268 126 aa6.23□□□□□ -1.41
CTHRC1-201ENST00000330295 ACYP2P14621 99 aa6.22□□□□□ -1.41
CTHRC1-201ENST00000330295 KRTAP5-10Q6L8G5 202 aa6.19□□□□□ -1.42
CTHRC1-201ENST00000330295 SPTSSBQ8NFR3 76 aa6.19□□□□□ -1.42
CTHRC1-201ENST00000330295 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
CTHRC1-201ENST00000330295 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
CTHRC1-201ENST00000330295 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
CTHRC1-201ENST00000330295 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
CTHRC1-201ENST00000330295 CHKB-CPT1BH3BT56 60 aa6.14□□□□□ -1.43
CTHRC1-201ENST00000330295 MT1XP80297 61 aa6.14□□□□□ -1.43
CTHRC1-201ENST00000330295 SERP2Q8N6R1 65 aa6.14□□□□□ -1.43
CTHRC1-201ENST00000330295 SNURFQ9Y675 71 aa6.13□□□□□ -1.43
CTHRC1-201ENST00000330295 R4GN34 69 aa6.12□□□□□ -1.43
CTHRC1-201ENST00000330295 KRTAP5-7Q6L8G8 165 aa6.08□□□□□ -1.44
CTHRC1-201ENST00000330295 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
CTHRC1-201ENST00000330295 M0QZ58 72 aa6.05□□□□□ -1.44
CTHRC1-201ENST00000330295 P0C880 135 aa6.05□□□□□ -1.44
CTHRC1-201ENST00000330295 PLAC4Q8WY50 150 aa6.05□□□□□ -1.44
CTHRC1-201ENST00000330295 COX7CP15954 63 aa5.97□□□□□ -1.45
CTHRC1-201ENST00000330295 MT4P47944 62 aa5.97□□□□□ -1.45
CTHRC1-201ENST00000330295 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
CTHRC1-201ENST00000330295 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
CTHRC1-201ENST00000330295 COA5Q86WW8 74 aa5.89□□□□□ -1.47
CTHRC1-201ENST00000330295 SEC61GP60059 68 aa5.87□□□□□ -1.47
CTHRC1-201ENST00000330295 PCP4P48539 62 aa5.85□□□□□ -1.47
CTHRC1-201ENST00000330295 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
CTHRC1-201ENST00000330295 ANAPC13Q9BS18 74 aa5.85□□□□□ -1.47
CTHRC1-201ENST00000330295 SERP1Q9Y6X1 66 aa5.83□□□□□ -1.48
CTHRC1-201ENST00000330295 H7BZZ5 65 aa5.82□□□□□ -1.48
CTHRC1-201ENST00000330295 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
CTHRC1-201ENST00000330295 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.73□□□□□ -1.49
CTHRC1-201ENST00000330295 CYSTM1Q9H1C7 97 aa5.73□□□□□ -1.49
CTHRC1-201ENST00000330295 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
CTHRC1-201ENST00000330295 A0A1B0GU33 70 aa5.66□□□□□ -1.5
CTHRC1-201ENST00000330295 ATP5EP56381 51 aaPredicted RBP5.66□□□□□ -1.5
CTHRC1-201ENST00000330295 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms