RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 DYNC2H1Q8NCM8 4307 aaKnown RBP2.52□□□□□ -2.01
SDR42E1-201ENST00000328945 PLECQ15149 4684 aaKnown RBP2.52□□□□□ -2.01
SDR42E1-201ENST00000328945 DNHD1Q96M86 4753 aa2.51□□□□□ -2.01
SDR42E1-201ENST00000328945 HUWE1Q7Z6Z7 4374 aaKnown RBP2.51□□□□□ -2.01
SDR42E1-201ENST00000328945 DNAH17Q9UFH2 4485 aa2.5□□□□□ -2.01
SDR42E1-201ENST00000328945 DNAH6Q9C0G6 4158 aa2.49□□□□□ -2.01
SDR42E1-201ENST00000328945 VPS13DQ5THJ4 4388 aa2.49□□□□□ -2.01
SDR42E1-201ENST00000328945 DNAH9Q9NYC9 4486 aa2.48□□□□□ -2.01
SDR42E1-201ENST00000328945 KRTAP3-2Q9BYR7 98 aa2.48□□□□□ -2.01
SDR42E1-201ENST00000328945 DNAH2Q9P225 4427 aa2.47□□□□□ -2.01
SDR42E1-201ENST00000328945 CRCT1Q9UGL9 99 aa2.47□□□□□ -2.01
SDR42E1-201ENST00000328945 DNAH10Q8IVF4 4471 aa2.45□□□□□ -2.02
SDR42E1-201ENST00000328945 RYR2Q92736 4967 aa2.43□□□□□ -2.02
SDR42E1-201ENST00000328945 VPS13BQ7Z7G8 4022 aa2.43□□□□□ -2.02
SDR42E1-201ENST00000328945 KRTAP3-3Q9BYR6 98 aa2.43□□□□□ -2.02
SDR42E1-201ENST00000328945 KMT2AQ03164 3969 aa2.42□□□□□ -2.02
SDR42E1-201ENST00000328945 PRKDCP78527 4128 aaKnown RBP2.42□□□□□ -2.02
SDR42E1-201ENST00000328945 KRTAP19-4Q3LI73 84 aa2.41□□□□□ -2.02
SDR42E1-201ENST00000328945 KRTAP10-12P60413 245 aa2.41□□□□□ -2.02
SDR42E1-201ENST00000328945 FRAS1Q86XX4 4008 aa2.41□□□□□ -2.02
SDR42E1-201ENST00000328945 KRTAP4-5Q9BYR2 181 aa2.39□□□□□ -2.03
SDR42E1-201ENST00000328945 RYR1P21817 5038 aa2.38□□□□□ -2.03
SDR42E1-201ENST00000328945 STARD9Q9P2P6 4700 aa2.38□□□□□ -2.03
SDR42E1-201ENST00000328945 DYNC1H1Q14204 4646 aaKnown RBP2.37□□□□□ -2.03
SDR42E1-201ENST00000328945 DNAH11Q96DT5 4516 aa2.37□□□□□ -2.03
SDR42E1-201ENST00000328945 LORP23490 312 aaPredicted RBP2.36□□□□□ -2.03
SDR42E1-201ENST00000328945 MT1HL1P0DM35 61 aa2.34□□□□□ -2.03
SDR42E1-201ENST00000328945 DNAH8Q96JB1 4490 aa2.34□□□□□ -2.03
SDR42E1-201ENST00000328945 KRTAP12-3P60328 96 aa2.34□□□□□ -2.04
SDR42E1-201ENST00000328945 KIAA1109Q2LD37 5005 aa2.33□□□□□ -2.04
SDR42E1-201ENST00000328945 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
SDR42E1-201ENST00000328945 PKHD1P08F94 4074 aa2.29□□□□□ -2.04
SDR42E1-201ENST00000328945 MT3P25713 68 aa2.28□□□□□ -2.04
SDR42E1-201ENST00000328945 BIRC6Q9NR09 4857 aa2.28□□□□□ -2.04
SDR42E1-201ENST00000328945 LCE3AQ5TA76 89 aa2.28□□□□□ -2.05
SDR42E1-201ENST00000328945 KRTAP8-1Q8IUC2 63 aa2.28□□□□□ -2.05
SDR42E1-201ENST00000328945 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
SDR42E1-201ENST00000328945 KRTAP10-4P60372 401 aaPredicted RBP2.27□□□□□ -2.05
SDR42E1-201ENST00000328945 SACSQ9NZJ4 4579 aa2.26□□□□□ -2.05
SDR42E1-201ENST00000328945 RYR3Q15413 4870 aa2.26□□□□□ -2.05
SDR42E1-201ENST00000328945 HYDINQ4G0P3 5121 aa2.26□□□□□ -2.05
SDR42E1-201ENST00000328945 PKHD1L1Q86WI1 4243 aa2.26□□□□□ -2.05
SDR42E1-201ENST00000328945 KRTAP10-5P60370 271 aa2.24□□□□□ -2.05
SDR42E1-201ENST00000328945 ABCA13Q86UQ4 5058 aa2.23□□□□□ -2.05
SDR42E1-201ENST00000328945 FAT2Q9NYQ8 4349 aa2.23□□□□□ -2.05
SDR42E1-201ENST00000328945 LRP1BQ9NZR2 4599 aa2.23□□□□□ -2.05
SDR42E1-201ENST00000328945 PKD1P98161 4303 aa2.21□□□□□ -2.06
SDR42E1-201ENST00000328945 APOBP04114 4563 aaKnown RBP2.21□□□□□ -2.06
SDR42E1-201ENST00000328945 HERC2O95714 4834 aa2.21□□□□□ -2.06
SDR42E1-201ENST00000328945 KMT2CQ8NEZ4 4911 aaKnown RBP2.19□□□□□ -2.06
SDR42E1-201ENST00000328945 PCLOQ9Y6V0 5065 aa2.17□□□□□ -2.06
SDR42E1-201ENST00000328945 RNF213Q63HN8 5207 aa2.17□□□□□ -2.06
SDR42E1-201ENST00000328945 FAT1Q14517 4588 aa2.16□□□□□ -2.06
SDR42E1-201ENST00000328945 KRTAP10-7P60409 375 aaPredicted RBP2.15□□□□□ -2.06
SDR42E1-201ENST00000328945 EPPK1P58107 5090 aaKnown RBP2.15□□□□□ -2.07
SDR42E1-201ENST00000328945 MYCBP2O75592 4640 aa2.14□□□□□ -2.07
SDR42E1-201ENST00000328945 SPRR2FQ96RM1 72 aa2.13□□□□□ -2.07
SDR42E1-201ENST00000328945 FAT3Q8TDW7 4589 aa2.13□□□□□ -2.07
SDR42E1-201ENST00000328945 LRP1Q07954 4544 aaKnown RBP2.12□□□□□ -2.07
SDR42E1-201ENST00000328945 HERC1Q15751 4861 aa2.12□□□□□ -2.07
SDR42E1-201ENST00000328945 MT1HP80294 61 aa2.07□□□□□ -2.08
SDR42E1-201ENST00000328945 KRTAP17-1Q9BYP8 105 aa2.07□□□□□ -2.08
SDR42E1-201ENST00000328945 HSPG2P98160 4391 aa2.07□□□□□ -2.08
SDR42E1-201ENST00000328945 KRTAP4-1Q9BYQ7 146 aa2.07□□□□□ -2.08
SDR42E1-201ENST00000328945 LCE3CQ5T5A8 94 aa2.07□□□□□ -2.08
SDR42E1-201ENST00000328945 HMCN2Q8NDA2 5059 aa2.05□□□□□ -2.08
SDR42E1-201ENST00000328945 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
SDR42E1-201ENST00000328945 SPRR2EP22531 72 aa2.04□□□□□ -2.08
SDR42E1-201ENST00000328945 SPRR2BP35325 72 aa2.04□□□□□ -2.08
SDR42E1-201ENST00000328945 SPRR2AP35326 72 aa2.04□□□□□ -2.08
SDR42E1-201ENST00000328945 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
SDR42E1-201ENST00000328945 TNXBP22105 4242 aa2.03□□□□□ -2.08
SDR42E1-201ENST00000328945 MT2AP02795 61 aa2.03□□□□□ -2.08
SDR42E1-201ENST00000328945 UBR4Q5T4S7 5183 aa2.03□□□□□ -2.08
SDR42E1-201ENST00000328945 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
SDR42E1-201ENST00000328945 MT1FP04733 61 aa2□□□□□ -2.09
SDR42E1-201ENST00000328945 SPRR2DP22532 72 aa1.98□□□□□ -2.09
SDR42E1-201ENST00000328945 KRTAP12-4P60329 112 aa1.96□□□□□ -2.1
SDR42E1-201ENST00000328945 MUC17Q685J3 4493 aa1.93□□□□□ -2.1
SDR42E1-201ENST00000328945 LCE3BQ5TA77 95 aa1.92□□□□□ -2.1
SDR42E1-201ENST00000328945 LRP2P98164 4655 aa1.92□□□□□ -2.1
SDR42E1-201ENST00000328945 LCE2BO14633 110 aa1.92□□□□□ -2.1
SDR42E1-201ENST00000328945 KRTAP19-2Q3LHN2 52 aa1.9□□□□□ -2.11
SDR42E1-201ENST00000328945 KRTAP19-1Q8IUB9 90 aa1.86□□□□□ -2.11
SDR42E1-201ENST00000328945 FAT4Q6V0I7 4981 aa1.85□□□□□ -2.11
SDR42E1-201ENST00000328945 MT1GP13640 62 aa1.85□□□□□ -2.11
SDR42E1-201ENST00000328945 LCE2CQ5TA81 110 aa1.85□□□□□ -2.11
SDR42E1-201ENST00000328945 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.11
SDR42E1-201ENST00000328945 MT1XP80297 61 aa1.83□□□□□ -2.12
SDR42E1-201ENST00000328945 USH2AO75445 5202 aa1.82□□□□□ -2.12
SDR42E1-201ENST00000328945 MT4P47944 62 aa1.81□□□□□ -2.12
SDR42E1-201ENST00000328945 LCE2DQ5TA82 110 aaPredicted RBP1.81□□□□□ -2.12
SDR42E1-201ENST00000328945 LCE3DQ9BYE3 92 aa1.8□□□□□ -2.12
SDR42E1-201ENST00000328945 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
SDR42E1-201ENST00000328945 KRTAP9-2Q9BYQ4 174 aa1.77□□□□□ -2.13
SDR42E1-201ENST00000328945 KRTAP4-8A0A0G2JLE6 195 aa1.75□□□□□ -2.13
SDR42E1-201ENST00000328945 KRTAP4-8Q9BYQ9 185 aa1.75□□□□□ -2.13
SDR42E1-201ENST00000328945 KRTAP9-8Q9BYQ0 159 aa1.73□□□□□ -2.13
SDR42E1-201ENST00000328945 MT1BP07438 61 aa1.73□□□□□ -2.13
SDR42E1-201ENST00000328945 KRTAP9-3Q9BYQ3 159 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms