RNA–Protein interactions for RNA: ENST00000328834.9

CNOT10-201, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT10, Length 2,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-201ENST00000328834 KRTAP10-8P60410 259 aa7.73□□□□□ -1.17
CNOT10-201ENST00000328834 COX6B2Q6YFQ2 88 aa7.72□□□□□ -1.17
CNOT10-201ENST00000328834 A0A0D9SG42 100 aa7.72□□□□□ -1.17
CNOT10-201ENST00000328834 RYR3Q15413 4870 aa7.72□□□□□ -1.17
CNOT10-201ENST00000328834 KRTAP17-1Q9BYP8 105 aa7.69□□□□□ -1.18
CNOT10-201ENST00000328834 KIAA1109Q2LD37 5005 aa7.68□□□□□ -1.18
CNOT10-201ENST00000328834 KRTAP13-4Q3LI77 160 aa7.66□□□□□ -1.18
CNOT10-201ENST00000328834 LRP2P98164 4655 aa7.64□□□□□ -1.19
CNOT10-201ENST00000328834 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
CNOT10-201ENST00000328834 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.19
CNOT10-201ENST00000328834 Q5VSD8 79 aa7.59□□□□□ -1.19
CNOT10-201ENST00000328834 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
CNOT10-201ENST00000328834 RYR1P21817 5038 aa7.58□□□□□ -1.2
CNOT10-201ENST00000328834 P0C880 135 aa7.56□□□□□ -1.2
CNOT10-201ENST00000328834 XP32Q5T750 250 aa7.56□□□□□ -1.2
CNOT10-201ENST00000328834 ABCA13Q86UQ4 5058 aa7.53□□□□□ -1.2
CNOT10-201ENST00000328834 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
CNOT10-201ENST00000328834 RPL37P61927 97 aaKnown RBP7.51□□□□□ -1.21
CNOT10-201ENST00000328834 S4R3F8 94 aa7.5□□□□□ -1.21
CNOT10-201ENST00000328834 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
CNOT10-201ENST00000328834 K7ERS5 55 aa7.47□□□□□ -1.21
CNOT10-201ENST00000328834 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
CNOT10-201ENST00000328834 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.21
CNOT10-201ENST00000328834 H3BS24 57 aa7.41□□□□□ -1.22
CNOT10-201ENST00000328834 ROMO1P60602 79 aa7.4□□□□□ -1.22
CNOT10-201ENST00000328834 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
CNOT10-201ENST00000328834 KRTAP12-2P59991 146 aa7.39□□□□□ -1.23
CNOT10-201ENST00000328834 SPINT4Q6UDR6 99 aa7.37□□□□□ -1.23
CNOT10-201ENST00000328834 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
CNOT10-201ENST00000328834 MUC2Q02817 5179 aa7.25□□□□□ -1.25
CNOT10-201ENST00000328834 KRTAP4-5Q9BYR2 181 aa7.24□□□□□ -1.25
CNOT10-201ENST00000328834 KRTAP12-1P59990 96 aa7.23□□□□□ -1.25
CNOT10-201ENST00000328834 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
CNOT10-201ENST00000328834 M0QZ58 72 aa7.1□□□□□ -1.27
CNOT10-201ENST00000328834 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
CNOT10-201ENST00000328834 KRTAP4-1Q9BYQ7 146 aa7.05□□□□□ -1.28
CNOT10-201ENST00000328834 R4GN34 69 aa7.01□□□□□ -1.29
CNOT10-201ENST00000328834 NDUFAF8A1L188 74 aa6.99□□□□□ -1.29
CNOT10-201ENST00000328834 HERC2O95714 4834 aa6.99□□□□□ -1.29
CNOT10-201ENST00000328834 KRTAP15-1Q3LI76 137 aa6.95□□□□□ -1.3
CNOT10-201ENST00000328834 HERC1Q15751 4861 aa6.85□□□□□ -1.31
CNOT10-201ENST00000328834 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
CNOT10-201ENST00000328834 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.31
CNOT10-201ENST00000328834 J3QL48 77 aa6.82□□□□□ -1.32
CNOT10-201ENST00000328834 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
CNOT10-201ENST00000328834 KRTAP19-2Q3LHN2 52 aa6.74□□□□□ -1.33
CNOT10-201ENST00000328834 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
CNOT10-201ENST00000328834 RNF213Q63HN8 5207 aa6.7□□□□□ -1.34
CNOT10-201ENST00000328834 FLGP20930 4061 aaPredicted RBP6.68□□□□□ -1.34
CNOT10-201ENST00000328834 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
CNOT10-201ENST00000328834 BIRC6Q9NR09 4857 aa6.6□□□□□ -1.35
CNOT10-201ENST00000328834 HMCN2Q8NDA2 5059 aa6.54□□□□□ -1.36
CNOT10-201ENST00000328834 UBR4Q5T4S7 5183 aa6.51□□□□□ -1.37
CNOT10-201ENST00000328834 M0R2T5 61 aa6.34□□□□□ -1.39
CNOT10-201ENST00000328834 LCE2CQ5TA81 110 aa6.34□□□□□ -1.4
CNOT10-201ENST00000328834 TNP1P09430 55 aa6.33□□□□□ -1.4
CNOT10-201ENST00000328834 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
CNOT10-201ENST00000328834 LUZP6Q538Z0 58 aa6.27□□□□□ -1.41
CNOT10-201ENST00000328834 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
CNOT10-201ENST00000328834 MT1FP04733 61 aa6.17□□□□□ -1.42
CNOT10-201ENST00000328834 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
CNOT10-201ENST00000328834 MT1HP80294 61 aa6.17□□□□□ -1.42
CNOT10-201ENST00000328834 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
CNOT10-201ENST00000328834 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
CNOT10-201ENST00000328834 MT2AP02795 61 aa6.1□□□□□ -1.43
CNOT10-201ENST00000328834 USH2AO75445 5202 aa6.06□□□□□ -1.44
CNOT10-201ENST00000328834 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
CNOT10-201ENST00000328834 KMT2DO14686 5537 aa6.01□□□□□ -1.45
CNOT10-201ENST00000328834 SPRR5A0A1B0GTR4 108 aa5.98□□□□□ -1.45
CNOT10-201ENST00000328834 A0A0A0MQY5 61 aa5.95□□□□□ -1.46
CNOT10-201ENST00000328834 KRTAP23-1A1A580 65 aa5.93□□□□□ -1.46
CNOT10-201ENST00000328834 MT1BP07438 61 aa5.92□□□□□ -1.46
CNOT10-201ENST00000328834 KRTAP10-5P60370 271 aa5.91□□□□□ -1.46
CNOT10-201ENST00000328834 MT1XP80297 61 aa5.9□□□□□ -1.46
CNOT10-201ENST00000328834 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
CNOT10-201ENST00000328834 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
CNOT10-201ENST00000328834 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
CNOT10-201ENST00000328834 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
CNOT10-201ENST00000328834 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
CNOT10-201ENST00000328834 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
CNOT10-201ENST00000328834 LCE2BO14633 110 aa5.61□□□□□ -1.51
CNOT10-201ENST00000328834 KRTAP4-8A0A0G2JLE6 195 aa5.6□□□□□ -1.51
CNOT10-201ENST00000328834 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
CNOT10-201ENST00000328834 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
CNOT10-201ENST00000328834 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
CNOT10-201ENST00000328834 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
CNOT10-201ENST00000328834 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
CNOT10-201ENST00000328834 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
CNOT10-201ENST00000328834 LCE3CQ5T5A8 94 aa5.4□□□□□ -1.55
CNOT10-201ENST00000328834 SSPOA2VEC9 5147 aa5.31□□□□□ -1.56
CNOT10-201ENST00000328834 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
CNOT10-201ENST00000328834 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
CNOT10-201ENST00000328834 INE1O15225 51 aa5.23□□□□□ -1.57
CNOT10-201ENST00000328834 MUC12Q9UKN1 5478 aa5.22□□□□□ -1.57
CNOT10-201ENST00000328834 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
CNOT10-201ENST00000328834 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
CNOT10-201ENST00000328834 KRTAP4-3Q9BYR4 195 aa5.1□□□□□ -1.59
CNOT10-201ENST00000328834 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
CNOT10-201ENST00000328834 MT1LQ93083 61 aa5.08□□□□□ -1.6
CNOT10-201ENST00000328834 MT1EP04732 61 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms