RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 A0A1B0GU33 70 aa9.95□□□□□ -0.82
SPSB1-201ENST00000328089 CRIPTQ9P021 101 aa9.95□□□□□ -0.82
SPSB1-201ENST00000328089 KRTAP17-1Q9BYP8 105 aa9.9□□□□□ -0.82
SPSB1-201ENST00000328089 LPAP08519 4548 aa9.89□□□□□ -0.83
SPSB1-201ENST00000328089 A0A0D9SG42 100 aa9.88□□□□□ -0.83
SPSB1-201ENST00000328089 KRTAP21-3Q3LHN1 58 aa9.88□□□□□ -0.83
SPSB1-201ENST00000328089 COX6B2Q6YFQ2 88 aa9.87□□□□□ -0.83
SPSB1-201ENST00000328089 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
SPSB1-201ENST00000328089 RYR1P21817 5038 aa9.85□□□□□ -0.83
SPSB1-201ENST00000328089 TNXBP22105 4242 aa9.83□□□□□ -0.84
SPSB1-201ENST00000328089 LRP2P98164 4655 aa9.82□□□□□ -0.84
SPSB1-201ENST00000328089 H1FX-AS1Q4G0G2 97 aa9.81□□□□□ -0.84
SPSB1-201ENST00000328089 ROMO1P60602 79 aa9.78□□□□□ -0.84
SPSB1-201ENST00000328089 XP32Q5T750 250 aa9.77□□□□□ -0.85
SPSB1-201ENST00000328089 EPPK1P58107 5090 aaKnown RBP9.74□□□□□ -0.85
SPSB1-201ENST00000328089 RPL37P61927 97 aaKnown RBP9.69□□□□□ -0.86
SPSB1-201ENST00000328089 ABCA13Q86UQ4 5058 aa9.68□□□□□ -0.86
SPSB1-201ENST00000328089 S4R3F8 94 aa9.63□□□□□ -0.87
SPSB1-201ENST00000328089 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
SPSB1-201ENST00000328089 KRTAP13-4Q3LI77 160 aa9.62□□□□□ -0.87
SPSB1-201ENST00000328089 P0C880 135 aa9.61□□□□□ -0.87
SPSB1-201ENST00000328089 K7ERS5 55 aa9.59□□□□□ -0.87
SPSB1-201ENST00000328089 MT1HL1P0DM35 61 aa9.56□□□□□ -0.88
SPSB1-201ENST00000328089 KRTAP10-6P60371 365 aaPredicted RBP9.55□□□□□ -0.88
SPSB1-201ENST00000328089 KRTAP4-5Q9BYR2 181 aa9.52□□□□□ -0.89
SPSB1-201ENST00000328089 SPINT4Q6UDR6 99 aa9.48□□□□□ -0.89
SPSB1-201ENST00000328089 KRTAP25-1Q3LHN0 102 aa9.47□□□□□ -0.89
SPSB1-201ENST00000328089 KRTAP3-2Q9BYR7 98 aa9.45□□□□□ -0.9
SPSB1-201ENST00000328089 MUC2Q02817 5179 aa9.45□□□□□ -0.9
SPSB1-201ENST00000328089 NDUFAF8A1L188 74 aa9.41□□□□□ -0.9
SPSB1-201ENST00000328089 C10orf95Q9H7T3 257 aa9.39□□□□□ -0.91
SPSB1-201ENST00000328089 KRTAP12-2P59991 146 aa9.31□□□□□ -0.92
SPSB1-201ENST00000328089 J3QL48 77 aa9.23□□□□□ -0.93
SPSB1-201ENST00000328089 HERC2O95714 4834 aa9.21□□□□□ -0.94
SPSB1-201ENST00000328089 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
SPSB1-201ENST00000328089 M0QZ58 72 aa9.16□□□□□ -0.94
SPSB1-201ENST00000328089 KRTAP12-1P59990 96 aa9.11□□□□□ -0.95
SPSB1-201ENST00000328089 R4GN34 69 aa9.09□□□□□ -0.95
SPSB1-201ENST00000328089 KRTAP4-1Q9BYQ7 146 aa9.06□□□□□ -0.96
SPSB1-201ENST00000328089 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
SPSB1-201ENST00000328089 LUZP6Q538Z0 58 aa9.04□□□□□ -0.96
SPSB1-201ENST00000328089 HERC1Q15751 4861 aa9.01□□□□□ -0.97
SPSB1-201ENST00000328089 SEC61BP60468 96 aaKnown RBP8.98□□□□□ -0.97
SPSB1-201ENST00000328089 FAT4Q6V0I7 4981 aa8.94□□□□□ -0.98
SPSB1-201ENST00000328089 MUC17Q685J3 4493 aa8.89□□□□□ -0.99
SPSB1-201ENST00000328089 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
SPSB1-201ENST00000328089 KRTAP15-1Q3LI76 137 aa8.83□□□□□ -1
SPSB1-201ENST00000328089 PCLOQ9Y6V0 5065 aa8.78□□□□□ -1
SPSB1-201ENST00000328089 CAMK2N1Q7Z7J9 78 aa8.73□□□□□ -1.01
SPSB1-201ENST00000328089 UBR4Q5T4S7 5183 aa8.59□□□□□ -1.03
SPSB1-201ENST00000328089 BIRC6Q9NR09 4857 aa8.56□□□□□ -1.04
SPSB1-201ENST00000328089 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
SPSB1-201ENST00000328089 M0R2T5 61 aa8.51□□□□□ -1.05
SPSB1-201ENST00000328089 HMCN2Q8NDA2 5059 aa8.48□□□□□ -1.05
SPSB1-201ENST00000328089 FLGP20930 4061 aaPredicted RBP8.46□□□□□ -1.06
SPSB1-201ENST00000328089 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
SPSB1-201ENST00000328089 LCE2CQ5TA81 110 aa8.16□□□□□ -1.1
SPSB1-201ENST00000328089 TNP1P09430 55 aa8.15□□□□□ -1.11
SPSB1-201ENST00000328089 KRTAP10-10P60014 251 aa8.14□□□□□ -1.11
SPSB1-201ENST00000328089 MT1HP80294 61 aa8.03□□□□□ -1.12
SPSB1-201ENST00000328089 KRTAP19-1Q8IUB9 90 aa8.01□□□□□ -1.13
SPSB1-201ENST00000328089 PP632Q6XCG6 107 aa8□□□□□ -1.13
SPSB1-201ENST00000328089 MT1FP04733 61 aa7.98□□□□□ -1.13
SPSB1-201ENST00000328089 USH2AO75445 5202 aa7.96□□□□□ -1.14
SPSB1-201ENST00000328089 MT2AP02795 61 aa7.91□□□□□ -1.14
SPSB1-201ENST00000328089 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
SPSB1-201ENST00000328089 LCE3AQ5TA76 89 aa7.83□□□□□ -1.16
SPSB1-201ENST00000328089 KRTAP9-8Q9BYQ0 159 aa7.78□□□□□ -1.16
SPSB1-201ENST00000328089 KMT2DO14686 5537 aa7.74□□□□□ -1.17
SPSB1-201ENST00000328089 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
SPSB1-201ENST00000328089 MT1BP07438 61 aa7.58□□□□□ -1.2
SPSB1-201ENST00000328089 PRO2289Q9P1D8 64 aa7.55□□□□□ -1.2
SPSB1-201ENST00000328089 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
SPSB1-201ENST00000328089 MT1XP80297 61 aa7.54□□□□□ -1.2
SPSB1-201ENST00000328089 KRTAP10-7P60409 375 aaPredicted RBP7.51□□□□□ -1.21
SPSB1-201ENST00000328089 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
SPSB1-201ENST00000328089 KRTAP10-12P60413 245 aa7.45□□□□□ -1.22
SPSB1-201ENST00000328089 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
SPSB1-201ENST00000328089 KRTAP9-3Q9BYQ3 159 aa7.42□□□□□ -1.22
SPSB1-201ENST00000328089 KRTAP12-3P60328 96 aa7.38□□□□□ -1.23
SPSB1-201ENST00000328089 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
SPSB1-201ENST00000328089 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
SPSB1-201ENST00000328089 LCE2BO14633 110 aa7.29□□□□□ -1.24
SPSB1-201ENST00000328089 KRTAP4-8A0A0G2JLE6 195 aa7.23□□□□□ -1.25
SPSB1-201ENST00000328089 KRTAP4-8Q9BYQ9 185 aa7.23□□□□□ -1.25
SPSB1-201ENST00000328089 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.26
SPSB1-201ENST00000328089 INE1O15225 51 aa7.07□□□□□ -1.28
SPSB1-201ENST00000328089 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
SPSB1-201ENST00000328089 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
SPSB1-201ENST00000328089 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
SPSB1-201ENST00000328089 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
SPSB1-201ENST00000328089 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
SPSB1-201ENST00000328089 MUC12Q9UKN1 5478 aa6.82□□□□□ -1.32
SPSB1-201ENST00000328089 KRTAP9-6A8MVA2 160 aa6.76□□□□□ -1.33
SPSB1-201ENST00000328089 FCGBPQ9Y6R7 5405 aaPredicted RBP6.75□□□□□ -1.33
SPSB1-201ENST00000328089 KRTAP19-7Q3SYF9 63 aa6.7□□□□□ -1.34
SPSB1-201ENST00000328089 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
SPSB1-201ENST00000328089 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
SPSB1-201ENST00000328089 MT1LQ93083 61 aa6.5□□□□□ -1.37
SPSB1-201ENST00000328089 SYNE1Q8NF91 8797 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms