RNA–Protein interactions for RNA: ENST00000326427.10

ITM2C-202, Transcript of integral membrane protein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2C, Length 2,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-202ENST00000326427 Q5VSD8 79 aa11.37□□□□□ -0.59
ITM2C-202ENST00000326427 XP32Q5T750 250 aa11.33□□□□□ -0.6
ITM2C-202ENST00000326427 HSPG2P98160 4391 aa11.33□□□□□ -0.6
ITM2C-202ENST00000326427 KRTAP3-3Q9BYR6 98 aa11.32□□□□□ -0.6
ITM2C-202ENST00000326427 EPPK1P58107 5090 aaKnown RBP11.29□□□□□ -0.6
ITM2C-202ENST00000326427 KRTAP10-6P60371 365 aaPredicted RBP11.24□□□□□ -0.61
ITM2C-202ENST00000326427 K7ERS5 55 aa11.2□□□□□ -0.62
ITM2C-202ENST00000326427 S4R3F8 94 aa11.19□□□□□ -0.62
ITM2C-202ENST00000326427 KRTAP3-2Q9BYR7 98 aa11.16□□□□□ -0.62
ITM2C-202ENST00000326427 KRTAP17-1Q9BYP8 105 aa11.15□□□□□ -0.63
ITM2C-202ENST00000326427 DMBT1Q9UGM3 2413 aaPredicted RBP11.15□□□□□ -0.63
ITM2C-202ENST00000326427 KRTAP25-1Q3LHN0 102 aa11.14□□□□□ -0.63
ITM2C-202ENST00000326427 MT1HL1P0DM35 61 aa11.12□□□□□ -0.63
ITM2C-202ENST00000326427 RYR1P21817 5038 aa11.11□□□□□ -0.63
ITM2C-202ENST00000326427 KRTAP13-4Q3LI77 160 aa11.1□□□□□ -0.63
ITM2C-202ENST00000326427 MYCBP2O75592 4640 aa11.06□□□□□ -0.64
ITM2C-202ENST00000326427 P0C880 135 aa10.97□□□□□ -0.65
ITM2C-202ENST00000326427 ROMO1P60602 79 aa10.97□□□□□ -0.65
ITM2C-202ENST00000326427 A0A0D9SG42 100 aa10.94□□□□□ -0.66
ITM2C-202ENST00000326427 BIRC6Q9NR09 4857 aa10.94□□□□□ -0.66
ITM2C-202ENST00000326427 TPRXLQ17RH7 258 aa10.92□□□□□ -0.66
ITM2C-202ENST00000326427 KIAA1109Q2LD37 5005 aa10.91□□□□□ -0.66
ITM2C-202ENST00000326427 CRIPTQ9P021 101 aa10.86□□□□□ -0.67
ITM2C-202ENST00000326427 LPAP08519 4548 aa10.8□□□□□ -0.68
ITM2C-202ENST00000326427 LRP2P98164 4655 aa10.75□□□□□ -0.69
ITM2C-202ENST00000326427 KRTAP12-2P59991 146 aa10.74□□□□□ -0.69
ITM2C-202ENST00000326427 KRTAP12-1P59990 96 aa10.69□□□□□ -0.7
ITM2C-202ENST00000326427 M0QZ58 72 aa10.68□□□□□ -0.7
ITM2C-202ENST00000326427 HERC2O95714 4834 aa10.67□□□□□ -0.7
ITM2C-202ENST00000326427 SPINT4Q6UDR6 99 aa10.58□□□□□ -0.72
ITM2C-202ENST00000326427 PCLOQ9Y6V0 5065 aa10.58□□□□□ -0.72
ITM2C-202ENST00000326427 ABCA13Q86UQ4 5058 aa10.54□□□□□ -0.72
ITM2C-202ENST00000326427 KRTAP4-5Q9BYR2 181 aa10.53□□□□□ -0.72
ITM2C-202ENST00000326427 C10orf95Q9H7T3 257 aa10.52□□□□□ -0.73
ITM2C-202ENST00000326427 SEC61BP60468 96 aaKnown RBP10.48□□□□□ -0.73
ITM2C-202ENST00000326427 MUC17Q685J3 4493 aa10.41□□□□□ -0.74
ITM2C-202ENST00000326427 R4GN34 69 aa10.35□□□□□ -0.75
ITM2C-202ENST00000326427 KRTAP4-1Q9BYQ7 146 aa10.33□□□□□ -0.76
ITM2C-202ENST00000326427 H3BS24 57 aa10.31□□□□□ -0.76
ITM2C-202ENST00000326427 LORP23490 312 aaPredicted RBP10.23□□□□□ -0.77
ITM2C-202ENST00000326427 KRTAP19-2Q3LHN2 52 aa10.22□□□□□ -0.77
ITM2C-202ENST00000326427 J3QL48 77 aa10.2□□□□□ -0.78
ITM2C-202ENST00000326427 KRTAP15-1Q3LI76 137 aa10.18□□□□□ -0.78
ITM2C-202ENST00000326427 HERC1Q15751 4861 aa10.12□□□□□ -0.79
ITM2C-202ENST00000326427 FLGP20930 4061 aaPredicted RBP9.86□□□□□ -0.83
ITM2C-202ENST00000326427 NDUFAF8A1L188 74 aa9.84□□□□□ -0.83
ITM2C-202ENST00000326427 CAMK2N1Q7Z7J9 78 aa9.81□□□□□ -0.84
ITM2C-202ENST00000326427 PP632Q6XCG6 107 aa9.75□□□□□ -0.85
ITM2C-202ENST00000326427 MUC2Q02817 5179 aa9.72□□□□□ -0.85
ITM2C-202ENST00000326427 HMCN2Q8NDA2 5059 aa9.71□□□□□ -0.85
ITM2C-202ENST00000326427 PLAC4Q8WY50 150 aa9.7□□□□□ -0.86
ITM2C-202ENST00000326427 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
ITM2C-202ENST00000326427 UBR4Q5T4S7 5183 aa9.55□□□□□ -0.88
ITM2C-202ENST00000326427 TNP1P09430 55 aa9.49□□□□□ -0.89
ITM2C-202ENST00000326427 KRTAP23-1A1A580 65 aa9.48□□□□□ -0.89
ITM2C-202ENST00000326427 SPRR2GQ9BYE4 73 aa9.44□□□□□ -0.9
ITM2C-202ENST00000326427 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
ITM2C-202ENST00000326427 KRTAP19-1Q8IUB9 90 aa9.36□□□□□ -0.91
ITM2C-202ENST00000326427 MT1HP80294 61 aa9.28□□□□□ -0.92
ITM2C-202ENST00000326427 FAT4Q6V0I7 4981 aa9.28□□□□□ -0.92
ITM2C-202ENST00000326427 M0R2T5 61 aa9.24□□□□□ -0.93
ITM2C-202ENST00000326427 LUZP6Q538Z0 58 aa9.24□□□□□ -0.93
ITM2C-202ENST00000326427 MT2AP02795 61 aa9.16□□□□□ -0.94
ITM2C-202ENST00000326427 MT1FP04733 61 aa9.15□□□□□ -0.94
ITM2C-202ENST00000326427 SPRR5A0A1B0GTR4 108 aa9.13□□□□□ -0.95
ITM2C-202ENST00000326427 KRTAP10-10P60014 251 aa9.09□□□□□ -0.95
ITM2C-202ENST00000326427 KRTAP9-8Q9BYQ0 159 aa9.09□□□□□ -0.95
ITM2C-202ENST00000326427 KRTAP19-8Q3LI54 63 aa9.03□□□□□ -0.96
ITM2C-202ENST00000326427 LCE3AQ5TA76 89 aa8.98□□□□□ -0.97
ITM2C-202ENST00000326427 MT1BP07438 61 aa8.88□□□□□ -0.99
ITM2C-202ENST00000326427 KRTAP10-5P60370 271 aa8.84□□□□□ -0.99
ITM2C-202ENST00000326427 MT1XP80297 61 aa8.82□□□□□ -1
ITM2C-202ENST00000326427 KRTAP8-1Q8IUC2 63 aa8.82□□□□□ -1
ITM2C-202ENST00000326427 A0A0A0MQY5 61 aa8.77□□□□□ -1
ITM2C-202ENST00000326427 KRTAP9-3Q9BYQ3 159 aa8.71□□□□□ -1.01
ITM2C-202ENST00000326427 KRTAP10-12P60413 245 aa8.64□□□□□ -1.03
ITM2C-202ENST00000326427 LCE2AQ5TA79 106 aaPredicted RBP8.6□□□□□ -1.03
ITM2C-202ENST00000326427 KRTAP12-3P60328 96 aa8.57□□□□□ -1.04
ITM2C-202ENST00000326427 KRTAP10-7P60409 375 aaPredicted RBP8.54□□□□□ -1.04
ITM2C-202ENST00000326427 PRO2289Q9P1D8 64 aa8.48□□□□□ -1.05
ITM2C-202ENST00000326427 LCE2BO14633 110 aa8.33□□□□□ -1.08
ITM2C-202ENST00000326427 KRTAP19-5Q3LI72 72 aa8.19□□□□□ -1.1
ITM2C-202ENST00000326427 KRTAP9-2Q9BYQ4 174 aa8.12□□□□□ -1.11
ITM2C-202ENST00000326427 LCE2DQ5TA82 110 aaPredicted RBP8.1□□□□□ -1.11
ITM2C-202ENST00000326427 LCE3CQ5T5A8 94 aa8.08□□□□□ -1.12
ITM2C-202ENST00000326427 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
ITM2C-202ENST00000326427 INE1O15225 51 aa8.02□□□□□ -1.13
ITM2C-202ENST00000326427 KRTAP4-8A0A0G2JLE6 195 aa7.98□□□□□ -1.13
ITM2C-202ENST00000326427 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
ITM2C-202ENST00000326427 USH2AO75445 5202 aa7.97□□□□□ -1.13
ITM2C-202ENST00000326427 KMT2DO14686 5537 aa7.89□□□□□ -1.15
ITM2C-202ENST00000326427 KRTAP19-7Q3SYF9 63 aa7.86□□□□□ -1.15
ITM2C-202ENST00000326427 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
ITM2C-202ENST00000326427 KRTAP9-6A8MVA2 160 aa7.78□□□□□ -1.16
ITM2C-202ENST00000326427 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
ITM2C-202ENST00000326427 CRCT1Q9UGL9 99 aa7.72□□□□□ -1.17
ITM2C-202ENST00000326427 SSPOA2VEC9 5147 aa7.64□□□□□ -1.19
ITM2C-202ENST00000326427 MT1LQ93083 61 aa7.64□□□□□ -1.19
ITM2C-202ENST00000326427 MT1EP04732 61 aa7.63□□□□□ -1.19
ITM2C-202ENST00000326427 KRTAP4-7Q9BYR0 210 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms