RNA–Protein interactions for RNA: ENST00000325942.10

FRAS1-201, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene FRAS1, Length 7,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-201ENST00000325942 FBN3Q75N90 2809 aa4.09□□□□□ -1.75
FRAS1-201ENST00000325942 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
FRAS1-201ENST00000325942 SPRR2EP22531 72 aa4.02□□□□□ -1.77
FRAS1-201ENST00000325942 SPRR2BP35325 72 aa4.02□□□□□ -1.77
FRAS1-201ENST00000325942 SPRR2AP35326 72 aa4.02□□□□□ -1.77
FRAS1-201ENST00000325942 ZNF469Q96JG9 3925 aaPredicted RBP3.99□□□□□ -1.77
FRAS1-201ENST00000325942 FRAS1Q86XX4 4008 aa3.95□□□□□ -1.78
FRAS1-201ENST00000325942 OTOGQ6ZRI0 2925 aa3.94□□□□□ -1.78
FRAS1-201ENST00000325942 KRTAP3-2Q9BYR7 98 aa3.91□□□□□ -1.78
FRAS1-201ENST00000325942 KRTAP3-3Q9BYR6 98 aa3.89□□□□□ -1.79
FRAS1-201ENST00000325942 MT1HP80294 61 aa3.87□□□□□ -1.79
FRAS1-201ENST00000325942 SPRR2DP22532 72 aa3.86□□□□□ -1.79
FRAS1-201ENST00000325942 KRTAP10-4P60372 401 aaPredicted RBP3.86□□□□□ -1.79
FRAS1-201ENST00000325942 DNAH1Q9P2D7 4330 aa3.83□□□□□ -1.8
FRAS1-201ENST00000325942 ANK2Q01484 3957 aa3.83□□□□□ -1.8
FRAS1-201ENST00000325942 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
FRAS1-201ENST00000325942 KMT2AQ03164 3969 aa3.81□□□□□ -1.8
FRAS1-201ENST00000325942 VPS13BQ7Z7G8 4022 aa3.81□□□□□ -1.8
FRAS1-201ENST00000325942 DNAH2Q9P225 4427 aa3.79□□□□□ -1.8
FRAS1-201ENST00000325942 LYSTQ99698 3801 aa3.79□□□□□ -1.8
FRAS1-201ENST00000325942 KRTAP23-1A1A580 65 aa3.78□□□□□ -1.8
FRAS1-201ENST00000325942 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
FRAS1-201ENST00000325942 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
FRAS1-201ENST00000325942 KRTAP4-1Q9BYQ7 146 aa3.76□□□□□ -1.81
FRAS1-201ENST00000325942 DNAH9Q9NYC9 4486 aa3.73□□□□□ -1.81
FRAS1-201ENST00000325942 CMYA5Q8N3K9 4069 aa3.72□□□□□ -1.81
FRAS1-201ENST00000325942 LCE2BO14633 110 aa3.71□□□□□ -1.81
FRAS1-201ENST00000325942 DNAH7Q8WXX0 4024 aa3.71□□□□□ -1.82
FRAS1-201ENST00000325942 DNAH3Q8TD57 4116 aa3.71□□□□□ -1.82
FRAS1-201ENST00000325942 MT2AP02795 61 aa3.68□□□□□ -1.82
FRAS1-201ENST00000325942 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
FRAS1-201ENST00000325942 DNAH10Q8IVF4 4471 aa3.65□□□□□ -1.82
FRAS1-201ENST00000325942 MT1FP04733 61 aa3.64□□□□□ -1.83
FRAS1-201ENST00000325942 MT4P47944 62 aa3.62□□□□□ -1.83
FRAS1-201ENST00000325942 MT1GP13640 62 aa3.6□□□□□ -1.83
FRAS1-201ENST00000325942 LCE2CQ5TA81 110 aa3.59□□□□□ -1.84
FRAS1-201ENST00000325942 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
FRAS1-201ENST00000325942 DNAH6Q9C0G6 4158 aa3.58□□□□□ -1.84
FRAS1-201ENST00000325942 PRKDCP78527 4128 aaKnown RBP3.56□□□□□ -1.84
FRAS1-201ENST00000325942 LCE2DQ5TA82 110 aaPredicted RBP3.56□□□□□ -1.84
FRAS1-201ENST00000325942 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
FRAS1-201ENST00000325942 DNAH8Q96JB1 4490 aa3.53□□□□□ -1.84
FRAS1-201ENST00000325942 KRTAP17-1Q9BYP8 105 aa3.51□□□□□ -1.85
FRAS1-201ENST00000325942 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
FRAS1-201ENST00000325942 DNAH17Q9UFH2 4485 aa3.48□□□□□ -1.85
FRAS1-201ENST00000325942 DNAH11Q96DT5 4516 aa3.47□□□□□ -1.85
FRAS1-201ENST00000325942 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
FRAS1-201ENST00000325942 SPRR2GQ9BYE4 73 aa3.43□□□□□ -1.86
FRAS1-201ENST00000325942 PLECQ15149 4684 aaKnown RBP3.42□□□□□ -1.86
FRAS1-201ENST00000325942 KRTAP4-8A0A0G2JLE6 195 aa3.41□□□□□ -1.86
FRAS1-201ENST00000325942 KRTAP4-8Q9BYQ9 185 aa3.41□□□□□ -1.86
FRAS1-201ENST00000325942 VPS13DQ5THJ4 4388 aa3.4□□□□□ -1.87
FRAS1-201ENST00000325942 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
FRAS1-201ENST00000325942 STARD9Q9P2P6 4700 aa3.39□□□□□ -1.87
FRAS1-201ENST00000325942 DYNC2H1Q8NCM8 4307 aaKnown RBP3.39□□□□□ -1.87
FRAS1-201ENST00000325942 LRP1BQ9NZR2 4599 aa3.36□□□□□ -1.87
FRAS1-201ENST00000325942 LPAP08519 4548 aa3.34□□□□□ -1.87
FRAS1-201ENST00000325942 KRTAP9-2Q9BYQ4 174 aa3.33□□□□□ -1.88
FRAS1-201ENST00000325942 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
FRAS1-201ENST00000325942 LCE1DQ5T752 114 aa3.33□□□□□ -1.88
FRAS1-201ENST00000325942 DYNC1H1Q14204 4646 aaKnown RBP3.33□□□□□ -1.88
FRAS1-201ENST00000325942 FAT1Q14517 4588 aa3.32□□□□□ -1.88
FRAS1-201ENST00000325942 HECTD4Q9Y4D8 3996 aa3.32□□□□□ -1.88
FRAS1-201ENST00000325942 DNHD1Q96M86 4753 aa3.28□□□□□ -1.88
FRAS1-201ENST00000325942 PKHD1P08F94 4074 aa3.28□□□□□ -1.88
FRAS1-201ENST00000325942 PKD1P98161 4303 aa3.28□□□□□ -1.88
FRAS1-201ENST00000325942 SACSQ9NZJ4 4579 aa3.26□□□□□ -1.89
FRAS1-201ENST00000325942 PKHD1L1Q86WI1 4243 aa3.26□□□□□ -1.89
FRAS1-201ENST00000325942 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
FRAS1-201ENST00000325942 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
FRAS1-201ENST00000325942 RYR1P21817 5038 aa3.22□□□□□ -1.89
FRAS1-201ENST00000325942 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
FRAS1-201ENST00000325942 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
FRAS1-201ENST00000325942 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
FRAS1-201ENST00000325942 MT1XP80297 61 aa3.19□□□□□ -1.9
FRAS1-201ENST00000325942 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
FRAS1-201ENST00000325942 FAT3Q8TDW7 4589 aa3.18□□□□□ -1.9
FRAS1-201ENST00000325942 HSPG2P98160 4391 aa3.17□□□□□ -1.9
FRAS1-201ENST00000325942 APOBP04114 4563 aaKnown RBP3.17□□□□□ -1.9
FRAS1-201ENST00000325942 TNXBP22105 4242 aa3.16□□□□□ -1.9
FRAS1-201ENST00000325942 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
FRAS1-201ENST00000325942 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
FRAS1-201ENST00000325942 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
FRAS1-201ENST00000325942 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
FRAS1-201ENST00000325942 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
FRAS1-201ENST00000325942 KRTAP19-6Q3LI70 58 aa3.12□□□□□ -1.91
FRAS1-201ENST00000325942 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
FRAS1-201ENST00000325942 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.91
FRAS1-201ENST00000325942 KRTAP9-8Q9BYQ0 159 aa3.09□□□□□ -1.92
FRAS1-201ENST00000325942 RYR3Q15413 4870 aa3.08□□□□□ -1.92
FRAS1-201ENST00000325942 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
FRAS1-201ENST00000325942 MT1BP07438 61 aa3.07□□□□□ -1.92
FRAS1-201ENST00000325942 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
FRAS1-201ENST00000325942 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
FRAS1-201ENST00000325942 RYR2Q92736 4967 aa3.03□□□□□ -1.92
FRAS1-201ENST00000325942 SYNE2Q8WXH0 6885 aaKnown RBP3.03□□□□□ -1.92
FRAS1-201ENST00000325942 KRTAP9-7A8MTY7 169 aa3.03□□□□□ -1.92
FRAS1-201ENST00000325942 HERC1Q15751 4861 aa3.03□□□□□ -1.92
FRAS1-201ENST00000325942 PRM1P04553 51 aa3.03□□□□□ -1.92
FRAS1-201ENST00000325942 KRTAP19-4Q3LI73 84 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms