RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
USP9X-201ENST00000324545 HUWE1Q7Z6Z7 4374 aaKnown RBP3.5□□□□□ -1.85
USP9X-201ENST00000324545 FRAS1Q86XX4 4008 aa3.48□□□□□ -1.85
USP9X-201ENST00000324545 KRTAP10-6P60371 365 aaPredicted RBP3.47□□□□□ -1.85
USP9X-201ENST00000324545 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.86
USP9X-201ENST00000324545 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
USP9X-201ENST00000324545 ANK3Q12955 4377 aaKnown RBP3.45□□□□□ -1.86
USP9X-201ENST00000324545 KRTAP3-1Q9BYR8 98 aa3.37□□□□□ -1.87
USP9X-201ENST00000324545 PRKDCP78527 4128 aaKnown RBP3.35□□□□□ -1.87
USP9X-201ENST00000324545 VPS13DQ5THJ4 4388 aa3.35□□□□□ -1.87
USP9X-201ENST00000324545 KRTAP4-5Q9BYR2 181 aa3.33□□□□□ -1.88
USP9X-201ENST00000324545 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
USP9X-201ENST00000324545 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
USP9X-201ENST00000324545 DNAH17Q9UFH2 4485 aa3.29□□□□□ -1.88
USP9X-201ENST00000324545 INE1O15225 51 aa3.26□□□□□ -1.89
USP9X-201ENST00000324545 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
USP9X-201ENST00000324545 PKHD1P08F94 4074 aa3.26□□□□□ -1.89
USP9X-201ENST00000324545 KRTAP21-3Q3LHN1 58 aa3.23□□□□□ -1.89
USP9X-201ENST00000324545 DNAH10Q8IVF4 4471 aa3.21□□□□□ -1.9
USP9X-201ENST00000324545 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
USP9X-201ENST00000324545 KRTAP3-2Q9BYR7 98 aa3.13□□□□□ -1.91
USP9X-201ENST00000324545 KRTAP3-3Q9BYR6 98 aa3.11□□□□□ -1.91
USP9X-201ENST00000324545 DNAH11Q96DT5 4516 aa3.1□□□□□ -1.91
USP9X-201ENST00000324545 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
USP9X-201ENST00000324545 PKHD1L1Q86WI1 4243 aa3.08□□□□□ -1.92
USP9X-201ENST00000324545 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
USP9X-201ENST00000324545 MT1HL1P0DM35 61 aa3.07□□□□□ -1.92
USP9X-201ENST00000324545 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
USP9X-201ENST00000324545 DYNC2H1Q8NCM8 4307 aaKnown RBP3.04□□□□□ -1.92
USP9X-201ENST00000324545 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
USP9X-201ENST00000324545 DNAH9Q9NYC9 4486 aa3□□□□□ -1.93
USP9X-201ENST00000324545 KRTAP10-4P60372 401 aaPredicted RBP2.98□□□□□ -1.93
USP9X-201ENST00000324545 DNAH8Q96JB1 4490 aa2.95□□□□□ -1.94
USP9X-201ENST00000324545 SPRR2EP22531 72 aa2.93□□□□□ -1.94
USP9X-201ENST00000324545 SPRR2BP35325 72 aa2.93□□□□□ -1.94
USP9X-201ENST00000324545 SPRR2AP35326 72 aa2.93□□□□□ -1.94
USP9X-201ENST00000324545 DNHD1Q96M86 4753 aa2.91□□□□□ -1.94
USP9X-201ENST00000324545 KRTAP4-1Q9BYQ7 146 aa2.89□□□□□ -1.95
USP9X-201ENST00000324545 TNXBP22105 4242 aa2.86□□□□□ -1.95
USP9X-201ENST00000324545 MT1GP13640 62 aa2.85□□□□□ -1.95
USP9X-201ENST00000324545 MT1HP80294 61 aa2.81□□□□□ -1.96
USP9X-201ENST00000324545 PKD1P98161 4303 aa2.81□□□□□ -1.96
USP9X-201ENST00000324545 SPRR2DP22532 72 aa2.81□□□□□ -1.96
USP9X-201ENST00000324545 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
USP9X-201ENST00000324545 FAT1Q14517 4588 aa2.8□□□□□ -1.96
USP9X-201ENST00000324545 KRTAP17-1Q9BYP8 105 aa2.8□□□□□ -1.96
USP9X-201ENST00000324545 DYNC1H1Q14204 4646 aaKnown RBP2.8□□□□□ -1.96
USP9X-201ENST00000324545 DNAH5Q8TE73 4624 aa2.79□□□□□ -1.96
USP9X-201ENST00000324545 STARD9Q9P2P6 4700 aa2.79□□□□□ -1.96
USP9X-201ENST00000324545 RYR1P21817 5038 aa2.78□□□□□ -1.96
USP9X-201ENST00000324545 APOBP04114 4563 aaKnown RBP2.77□□□□□ -1.97
USP9X-201ENST00000324545 MT1FP04733 61 aa2.77□□□□□ -1.97
USP9X-201ENST00000324545 PLECQ15149 4684 aaKnown RBP2.76□□□□□ -1.97
USP9X-201ENST00000324545 PCLOQ9Y6V0 5065 aa2.75□□□□□ -1.97
USP9X-201ENST00000324545 MT2AP02795 61 aa2.74□□□□□ -1.97
USP9X-201ENST00000324545 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
USP9X-201ENST00000324545 MT4P47944 62 aa2.74□□□□□ -1.97
USP9X-201ENST00000324545 LRP1Q07954 4544 aaKnown RBP2.74□□□□□ -1.97
USP9X-201ENST00000324545 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
USP9X-201ENST00000324545 KIAA1109Q2LD37 5005 aa2.72□□□□□ -1.97
USP9X-201ENST00000324545 KRTAP23-1A1A580 65 aa2.72□□□□□ -1.97
USP9X-201ENST00000324545 SACSQ9NZJ4 4579 aa2.71□□□□□ -1.98
USP9X-201ENST00000324545 RYR3Q15413 4870 aa2.7□□□□□ -1.98
USP9X-201ENST00000324545 LCE2BO14633 110 aa2.69□□□□□ -1.98
USP9X-201ENST00000324545 HSPG2P98160 4391 aa2.67□□□□□ -1.98
USP9X-201ENST00000324545 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
USP9X-201ENST00000324545 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
USP9X-201ENST00000324545 LCE2CQ5TA81 110 aa2.63□□□□□ -1.99
USP9X-201ENST00000324545 KRTAP4-8A0A0G2JLE6 195 aa2.62□□□□□ -1.99
USP9X-201ENST00000324545 KRTAP4-8Q9BYQ9 185 aa2.62□□□□□ -1.99
USP9X-201ENST00000324545 LRP1BQ9NZR2 4599 aa2.62□□□□□ -1.99
USP9X-201ENST00000324545 LCE1DQ5T752 114 aa2.59□□□□□ -1.99
USP9X-201ENST00000324545 FAT3Q8TDW7 4589 aa2.59□□□□□ -1.99
USP9X-201ENST00000324545 HYDINQ4G0P3 5121 aa2.59□□□□□ -1.99
USP9X-201ENST00000324545 LCE2DQ5TA82 110 aaPredicted RBP2.59□□□□□ -2
USP9X-201ENST00000324545 KRTAP4-7Q9BYR0 210 aa2.59□□□□□ -2
USP9X-201ENST00000324545 RNF213Q63HN8 5207 aa2.57□□□□□ -2
USP9X-201ENST00000324545 LOC100996750A0A140TA64 210 aa2.57□□□□□ -2
USP9X-201ENST00000324545 MYCBP2O75592 4640 aa2.57□□□□□ -2
USP9X-201ENST00000324545 MUC17Q685J3 4493 aa2.56□□□□□ -2
USP9X-201ENST00000324545 RYR2Q92736 4967 aa2.55□□□□□ -2
USP9X-201ENST00000324545 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
USP9X-201ENST00000324545 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
USP9X-201ENST00000324545 PRM1P04553 51 aa2.54□□□□□ -2
USP9X-201ENST00000324545 KRTAP19-1Q8IUB9 90 aa2.52□□□□□ -2.01
USP9X-201ENST00000324545 LPAP08519 4548 aa2.49□□□□□ -2.01
USP9X-201ENST00000324545 MT1XP80297 61 aa2.49□□□□□ -2.01
USP9X-201ENST00000324545 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
USP9X-201ENST00000324545 KRTAP4-9Q9BYQ8 210 aa2.48□□□□□ -2.01
USP9X-201ENST00000324545 EPPK1P58107 5090 aaKnown RBP2.47□□□□□ -2.01
USP9X-201ENST00000324545 ABCA13Q86UQ4 5058 aa2.46□□□□□ -2.02
USP9X-201ENST00000324545 KMT2CQ8NEZ4 4911 aaKnown RBP2.45□□□□□ -2.02
USP9X-201ENST00000324545 LCE5AQ5TCM9 118 aa2.43□□□□□ -2.02
USP9X-201ENST00000324545 HERC2O95714 4834 aa2.43□□□□□ -2.02
USP9X-201ENST00000324545 BIRC6Q9NR09 4857 aa2.41□□□□□ -2.02
USP9X-201ENST00000324545 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
USP9X-201ENST00000324545 LCE1EQ5T753 118 aa2.41□□□□□ -2.02
USP9X-201ENST00000324545 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
USP9X-201ENST00000324545 LCE1AQ5T7P2 110 aa2.41□□□□□ -2.02
USP9X-201ENST00000324545 UBR4Q5T4S7 5183 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms