RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CHKB-CPT1BH3BT56 60 aa3.63□□□□□ -1.83
CSTF3-201ENST00000323959 SPAG11AQ6PDA7 123 aa3.63□□□□□ -1.83
CSTF3-201ENST00000323959 A0A087WSZ3 146 aa3.63□□□□□ -1.83
CSTF3-201ENST00000323959 MOBPQ13875 183 aa3.62□□□□□ -1.83
CSTF3-201ENST00000323959 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
CSTF3-201ENST00000323959 HCG22E2RYF7 251 aa3.61□□□□□ -1.83
CSTF3-201ENST00000323959 SPINK1P00995 79 aa3.61□□□□□ -1.83
CSTF3-201ENST00000323959 A6NN06 94 aa3.61□□□□□ -1.83
CSTF3-201ENST00000323959 C7orf65Q6ZTY9 151 aa3.61□□□□□ -1.83
CSTF3-201ENST00000323959 Q8N9P0 234 aaPredicted RBP3.61□□□□□ -1.83
CSTF3-201ENST00000323959 SPANXA2-OT1Q8N9U9 137 aa3.61□□□□□ -1.83
CSTF3-201ENST00000323959 IGLV9-49A0A0B4J1Y8 123 aa3.6□□□□□ -1.83
CSTF3-201ENST00000323959 A0A087X002 238 aa3.6□□□□□ -1.83
CSTF3-201ENST00000323959 C8orf87E5RJ46 101 aa3.6□□□□□ -1.83
CSTF3-201ENST00000323959 Q75L30 129 aa3.6□□□□□ -1.83
CSTF3-201ENST00000323959 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
CSTF3-201ENST00000323959 LCA10Q71F78 164 aa3.59□□□□□ -1.83
CSTF3-201ENST00000323959 LOC101927531A0A1B0GV80 90 aa3.59□□□□□ -1.83
CSTF3-201ENST00000323959 MP68P56378 58 aa3.59□□□□□ -1.83
CSTF3-201ENST00000323959 A8MU10 97 aa3.58□□□□□ -1.84
CSTF3-201ENST00000323959 K7EQZ3 153 aa3.58□□□□□ -1.84
CSTF3-201ENST00000323959 MT2AP02795 61 aa3.58□□□□□ -1.84
CSTF3-201ENST00000323959 LINC00208Q96KT6 92 aa3.58□□□□□ -1.84
CSTF3-201ENST00000323959 CDC42SE1Q9NRR8 79 aa3.58□□□□□ -1.84
CSTF3-201ENST00000323959 H3BPC8 53 aa3.58□□□□□ -1.84
CSTF3-201ENST00000323959 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
CSTF3-201ENST00000323959 MMP24-AS1A0A0U1RRL7 71 aa3.57□□□□□ -1.84
CSTF3-201ENST00000323959 A0A1B0GVX0 72 aa3.57□□□□□ -1.84
CSTF3-201ENST00000323959 A6NED7 52 aa3.57□□□□□ -1.84
CSTF3-201ENST00000323959 TP53AIP1Q9HCN2 124 aa3.57□□□□□ -1.84
CSTF3-201ENST00000323959 A0A0G2JQZ4 141 aa3.56□□□□□ -1.84
CSTF3-201ENST00000323959 ANAPC11Q9NYG5 84 aa3.55□□□□□ -1.84
CSTF3-201ENST00000323959 C8orf17Q9NRJ1 99 aa3.55□□□□□ -1.84
CSTF3-201ENST00000323959 PCOTHQ58A44 107 aa3.53□□□□□ -1.84
CSTF3-201ENST00000323959 CASC2Q6XLA1 102 aa3.53□□□□□ -1.84
CSTF3-201ENST00000323959 MT1FP04733 61 aa3.52□□□□□ -1.85
CSTF3-201ENST00000323959 LINC01558Q9Y6Z2 57 aa3.52□□□□□ -1.85
CSTF3-201ENST00000323959 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
CSTF3-201ENST00000323959 MRPL34Q9BQ48 92 aaKnown RBP3.51□□□□□ -1.85
CSTF3-201ENST00000323959 H0Y9P7 68 aa3.5□□□□□ -1.85
CSTF3-201ENST00000323959 COA5Q86WW8 74 aa3.5□□□□□ -1.85
CSTF3-201ENST00000323959 H3BS24 57 aa3.5□□□□□ -1.85
CSTF3-201ENST00000323959 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
CSTF3-201ENST00000323959 SPRR2EP22531 72 aa3.48□□□□□ -1.85
CSTF3-201ENST00000323959 SPRR2BP35325 72 aa3.48□□□□□ -1.85
CSTF3-201ENST00000323959 SPRR2AP35326 72 aa3.48□□□□□ -1.85
CSTF3-201ENST00000323959 DEFB116Q30KQ4 102 aa3.48□□□□□ -1.85
CSTF3-201ENST00000323959 WFDC13Q8IUB5 93 aa3.48□□□□□ -1.85
CSTF3-201ENST00000323959 LINC00313P59037 77 aa3.47□□□□□ -1.85
CSTF3-201ENST00000323959 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
CSTF3-201ENST00000323959 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
CSTF3-201ENST00000323959 C20orf166-AS1Q96NR2 134 aa3.46□□□□□ -1.86
CSTF3-201ENST00000323959 A8MUU9 505 aa3.45□□□□□ -1.86
CSTF3-201ENST00000323959 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
CSTF3-201ENST00000323959 SPINK7P58062 85 aa3.44□□□□□ -1.86
CSTF3-201ENST00000323959 NOTCH2NLQ7Z3S9 236 aa3.44□□□□□ -1.86
CSTF3-201ENST00000323959 KRTAP5-7Q6L8G8 165 aa3.44□□□□□ -1.86
CSTF3-201ENST00000323959 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
CSTF3-201ENST00000323959 IGKV2-30P06310 120 aa3.39□□□□□ -1.87
CSTF3-201ENST00000323959 SPRR2DP22532 72 aa3.39□□□□□ -1.87
CSTF3-201ENST00000323959 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
CSTF3-201ENST00000323959 HRES1P13985 223 aa3.38□□□□□ -1.87
CSTF3-201ENST00000323959 Q5W150 140 aa3.38□□□□□ -1.87
CSTF3-201ENST00000323959 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
CSTF3-201ENST00000323959 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
CSTF3-201ENST00000323959 ADM2Q7Z4H4 148 aa3.36□□□□□ -1.87
CSTF3-201ENST00000323959 RPL37P61927 97 aaKnown RBP3.34□□□□□ -1.87
CSTF3-201ENST00000323959 ACYP2P14621 99 aa3.33□□□□□ -1.88
CSTF3-201ENST00000323959 DMAC1Q96GE9 116 aa3.33□□□□□ -1.88
CSTF3-201ENST00000323959 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
CSTF3-201ENST00000323959 A0A1B0GU69 56 aa3.31□□□□□ -1.88
CSTF3-201ENST00000323959 UQCR11O14957 56 aa3.31□□□□□ -1.88
CSTF3-201ENST00000323959 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
CSTF3-201ENST00000323959 CSAG1Q6PB30 78 aa3.3□□□□□ -1.88
CSTF3-201ENST00000323959 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
CSTF3-201ENST00000323959 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
CSTF3-201ENST00000323959 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
CSTF3-201ENST00000323959 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
CSTF3-201ENST00000323959 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
CSTF3-201ENST00000323959 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
CSTF3-201ENST00000323959 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
CSTF3-201ENST00000323959 C9orf92A6NGG3 77 aa3.27□□□□□ -1.89
CSTF3-201ENST00000323959 ROMO1P60602 79 aa3.24□□□□□ -1.89
CSTF3-201ENST00000323959 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
CSTF3-201ENST00000323959 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
CSTF3-201ENST00000323959 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
CSTF3-201ENST00000323959 KRTAP3-1Q9BYR8 98 aa3.2□□□□□ -1.9
CSTF3-201ENST00000323959 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
CSTF3-201ENST00000323959 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
CSTF3-201ENST00000323959 H1FX-AS1Q4G0G2 97 aa3.13□□□□□ -1.91
CSTF3-201ENST00000323959 P0C880 135 aa3.11□□□□□ -1.91
CSTF3-201ENST00000323959 H0YAA0 97 aa3.11□□□□□ -1.91
CSTF3-201ENST00000323959 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.92
CSTF3-201ENST00000323959 K7ERS5 55 aa3.08□□□□□ -1.92
CSTF3-201ENST00000323959 S4R3F8 94 aa3.08□□□□□ -1.92
CSTF3-201ENST00000323959 A0A1B0GU33 70 aa3.06□□□□□ -1.92
CSTF3-201ENST00000323959 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
CSTF3-201ENST00000323959 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
CSTF3-201ENST00000323959 A0A0A0MQY5 61 aa3.04□□□□□ -1.92
CSTF3-201ENST00000323959 MT1BP07438 61 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms