RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 KRTAP5-9P26371 169 aa9.23□□□□□ -0.93
ME3-201ENST00000323418 CRIPTQ9P021 101 aa9.23□□□□□ -0.93
ME3-201ENST00000323418 IMUPQ9GZP8 106 aa9.15□□□□□ -0.94
ME3-201ENST00000323418 H0YAA0 97 aa9.14□□□□□ -0.95
ME3-201ENST00000323418 KMT2DO14686 5537 aa9.1□□□□□ -0.95
ME3-201ENST00000323418 ACYP1P07311 99 aa9.1□□□□□ -0.95
ME3-201ENST00000323418 H0Y9P7 68 aa9.09□□□□□ -0.95
ME3-201ENST00000323418 UQCRQO14949 82 aa9.09□□□□□ -0.95
ME3-201ENST00000323418 ATP5EP2Q5VTU8 51 aa9.08□□□□□ -0.96
ME3-201ENST00000323418 FAM240AA0A1B0GVK7 77 aa9.07□□□□□ -0.96
ME3-201ENST00000323418 NDUFC1O43677 76 aa9.06□□□□□ -0.96
ME3-201ENST00000323418 KRTAP20-1Q3LI63 56 aa9.06□□□□□ -0.96
ME3-201ENST00000323418 MDN1Q9NU22 5596 aa9.05□□□□□ -0.96
ME3-201ENST00000323418 PCP4L1A6NKN8 68 aa9.04□□□□□ -0.96
ME3-201ENST00000323418 ATOX1O00244 68 aa9.04□□□□□ -0.96
ME3-201ENST00000323418 HIST1H4AP62805 103 aaKnown RBP9.03□□□□□ -0.96
ME3-201ENST00000323418 A8MUN3 132 aa8.99□□□□□ -0.97
ME3-201ENST00000323418 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
ME3-201ENST00000323418 MT1XP80297 61 aa8.95□□□□□ -0.98
ME3-201ENST00000323418 LINC00208Q96KT6 92 aa8.91□□□□□ -0.98
ME3-201ENST00000323418 OCR1Q9BZK8 76 aa8.88□□□□□ -0.99
ME3-201ENST00000323418 LINC00643Q86TS7 51 aa8.87□□□□□ -0.99
ME3-201ENST00000323418 PRO2289Q9P1D8 64 aa8.85□□□□□ -0.99
ME3-201ENST00000323418 SPRR2FQ96RM1 72 aa8.82□□□□□ -1
ME3-201ENST00000323418 P0C880 135 aa8.81□□□□□ -1
ME3-201ENST00000323418 KRTAP2-3P0C7H8 128 aa8.77□□□□□ -1.01
ME3-201ENST00000323418 MP68P56378 58 aa8.77□□□□□ -1.01
ME3-201ENST00000323418 KRTAP12-2P59991 146 aa8.77□□□□□ -1.01
ME3-201ENST00000323418 PLAC4Q8WY50 150 aa8.77□□□□□ -1.01
ME3-201ENST00000323418 KRTAP2-4Q9BYR9 128 aa8.77□□□□□ -1.01
ME3-201ENST00000323418 SPRR2EP22531 72 aa8.75□□□□□ -1.01
ME3-201ENST00000323418 SPRR2BP35325 72 aa8.75□□□□□ -1.01
ME3-201ENST00000323418 SPRR2AP35326 72 aa8.75□□□□□ -1.01
ME3-201ENST00000323418 R4GN34 69 aa8.74□□□□□ -1.01
ME3-201ENST00000323418 KRTAP8-1Q8IUC2 63 aa8.71□□□□□ -1.02
ME3-201ENST00000323418 DMAC1Q96GE9 116 aa8.71□□□□□ -1.02
ME3-201ENST00000323418 M0QZ58 72 aa8.68□□□□□ -1.02
ME3-201ENST00000323418 H3BPC8 53 aa8.67□□□□□ -1.02
ME3-201ENST00000323418 LCE1AQ5T7P2 110 aa8.67□□□□□ -1.02
ME3-201ENST00000323418 C20orf197Q8N268 126 aa8.67□□□□□ -1.02
ME3-201ENST00000323418 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
ME3-201ENST00000323418 KRTAP4-8Q9BYQ9 185 aa8.63□□□□□ -1.03
ME3-201ENST00000323418 A0A1B0GV90 55 aa8.58□□□□□ -1.04
ME3-201ENST00000323418 KRTAP10-7P60409 375 aaPredicted RBP8.53□□□□□ -1.04
ME3-201ENST00000323418 LINC01554Q52M75 96 aa8.53□□□□□ -1.04
ME3-201ENST00000323418 KRTAP10-12P60413 245 aa8.5□□□□□ -1.05
ME3-201ENST00000323418 TRAV7A0A075B6U4 112 aa8.48□□□□□ -1.05
ME3-201ENST00000323418 KRTAP2-2Q9BYT5 123 aa8.48□□□□□ -1.05
ME3-201ENST00000323418 KRTAP2-1Q9BYU5 128 aa8.48□□□□□ -1.05
ME3-201ENST00000323418 SCGB1A1P11684 91 aa8.45□□□□□ -1.06
ME3-201ENST00000323418 SPRR2DP22532 72 aa8.45□□□□□ -1.06
ME3-201ENST00000323418 J3QR89 54 aa8.41□□□□□ -1.06
ME3-201ENST00000323418 ACYP2P14621 99 aa8.38□□□□□ -1.07
ME3-201ENST00000323418 MT-ATP8P03928 68 aa8.29□□□□□ -1.08
ME3-201ENST00000323418 SPTSSBQ8NFR3 76 aa8.27□□□□□ -1.09
ME3-201ENST00000323418 LCE3BQ5TA77 95 aa8.26□□□□□ -1.09
ME3-201ENST00000323418 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.1
ME3-201ENST00000323418 KRTAP13-4Q3LI77 160 aa8.18□□□□□ -1.1
ME3-201ENST00000323418 CHKB-CPT1BH3BT56 60 aa8.17□□□□□ -1.1
ME3-201ENST00000323418 SNURFQ9Y675 71 aa8.12□□□□□ -1.11
ME3-201ENST00000323418 SPANXA2-OT1Q8N9U9 137 aa8.07□□□□□ -1.12
ME3-201ENST00000323418 KRTAP19-7Q3SYF9 63 aa8.02□□□□□ -1.13
ME3-201ENST00000323418 K7ERU9 68 aa8□□□□□ -1.13
ME3-201ENST00000323418 LCE5AQ5TCM9 118 aa7.98□□□□□ -1.13
ME3-201ENST00000323418 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.14
ME3-201ENST00000323418 MT1EP04732 61 aa7.94□□□□□ -1.14
ME3-201ENST00000323418 DSTQ03001 7570 aaKnown RBP7.91□□□□□ -1.14
ME3-201ENST00000323418 KRTAP19-3Q7Z4W3 81 aa7.89□□□□□ -1.15
ME3-201ENST00000323418 SERP2Q8N6R1 65 aa7.89□□□□□ -1.15
ME3-201ENST00000323418 COA5Q86WW8 74 aa7.85□□□□□ -1.15
ME3-201ENST00000323418 A0A0D9SG42 100 aa7.78□□□□□ -1.16
ME3-201ENST00000323418 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
ME3-201ENST00000323418 KRTAP4-9Q9BYQ8 210 aa7.74□□□□□ -1.17
ME3-201ENST00000323418 KRTAP12-1P59990 96 aa7.71□□□□□ -1.18
ME3-201ENST00000323418 KRTAP19-5Q3LI72 72 aa7.71□□□□□ -1.18
ME3-201ENST00000323418 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
ME3-201ENST00000323418 SEC61GP60059 68 aa7.68□□□□□ -1.18
ME3-201ENST00000323418 CYSTM1Q9H1C7 97 aa7.68□□□□□ -1.18
ME3-201ENST00000323418 GPR98Q8WXG9 6306 aa7.67□□□□□ -1.18
ME3-201ENST00000323418 SPINT4Q6UDR6 99 aa7.67□□□□□ -1.18
ME3-201ENST00000323418 A0A1B0GU33 70 aa7.66□□□□□ -1.18
ME3-201ENST00000323418 MT1GP13640 62 aa7.66□□□□□ -1.18
ME3-201ENST00000323418 COX7CP15954 63 aa7.59□□□□□ -1.19
ME3-201ENST00000323418 H7BZZ5 65 aa7.57□□□□□ -1.2
ME3-201ENST00000323418 LCE1DQ5T752 114 aa7.57□□□□□ -1.2
ME3-201ENST00000323418 MT1MQ8N339 61 aa7.57□□□□□ -1.2
ME3-201ENST00000323418 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
ME3-201ENST00000323418 MT1LQ93083 61 aa7.54□□□□□ -1.2
ME3-201ENST00000323418 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
ME3-201ENST00000323418 HMCN1Q96RW7 5635 aa7.44□□□□□ -1.22
ME3-201ENST00000323418 A8MU10 97 aa7.44□□□□□ -1.22
ME3-201ENST00000323418 LCE3AQ5TA76 89 aa7.44□□□□□ -1.22
ME3-201ENST00000323418 SMIM26A0A096LP01 95 aa7.42□□□□□ -1.22
ME3-201ENST00000323418 KRTAP4-3Q9BYR4 195 aa7.41□□□□□ -1.22
ME3-201ENST00000323418 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
ME3-201ENST00000323418 A0A1B0GU69 56 aa7.4□□□□□ -1.22
ME3-201ENST00000323418 MT4P47944 62 aa7.4□□□□□ -1.22
ME3-201ENST00000323418 KRTAP5-4Q6L8H1 288 aa7.38□□□□□ -1.23
ME3-201ENST00000323418 TNP1P09430 55 aa7.32□□□□□ -1.24
ME3-201ENST00000323418 AHNAK2Q8IVF2 5795 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms