RNA–Protein interactions for RNA: ENST00000318304.12

PPFIBP1-202, Transcript of PPFIA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PPFIBP1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-202ENST00000318304 RPS29P62273 56 aaKnown RBP3.92□□□□□ -1.78
PPFIBP1-202ENST00000318304 KRTAP3-3Q9BYR6 98 aa3.91□□□□□ -1.78
PPFIBP1-202ENST00000318304 KRTAP3-2Q9BYR7 98 aa3.91□□□□□ -1.78
PPFIBP1-202ENST00000318304 SMR3BP02814 79 aaPredicted RBP3.91□□□□□ -1.78
PPFIBP1-202ENST00000318304 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
PPFIBP1-202ENST00000318304 SACSQ9NZJ4 4579 aa3.87□□□□□ -1.79
PPFIBP1-202ENST00000318304 HSPG2P98160 4391 aa3.84□□□□□ -1.79
PPFIBP1-202ENST00000318304 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.79
PPFIBP1-202ENST00000318304 S4R3F8 94 aa3.84□□□□□ -1.79
PPFIBP1-202ENST00000318304 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
PPFIBP1-202ENST00000318304 KRTAP10-8P60410 259 aa3.84□□□□□ -1.79
PPFIBP1-202ENST00000318304 APOBP04114 4563 aaKnown RBP3.81□□□□□ -1.8
PPFIBP1-202ENST00000318304 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
PPFIBP1-202ENST00000318304 KRTAP10-4P60372 401 aaPredicted RBP3.78□□□□□ -1.8
PPFIBP1-202ENST00000318304 XP32Q5T750 250 aa3.77□□□□□ -1.81
PPFIBP1-202ENST00000318304 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
PPFIBP1-202ENST00000318304 PKHD1L1Q86WI1 4243 aa3.74□□□□□ -1.81
PPFIBP1-202ENST00000318304 LRP2P98164 4655 aa3.72□□□□□ -1.81
PPFIBP1-202ENST00000318304 LPAP08519 4548 aa3.68□□□□□ -1.82
PPFIBP1-202ENST00000318304 KMT2CQ8NEZ4 4911 aaKnown RBP3.68□□□□□ -1.82
PPFIBP1-202ENST00000318304 M0QZ58 72 aa3.66□□□□□ -1.82
PPFIBP1-202ENST00000318304 A0A1B0GVY2 172 aa3.62□□□□□ -1.83
PPFIBP1-202ENST00000318304 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
PPFIBP1-202ENST00000318304 PLAC4Q8WY50 150 aa3.62□□□□□ -1.83
PPFIBP1-202ENST00000318304 TNXBP22105 4242 aa3.6□□□□□ -1.83
PPFIBP1-202ENST00000318304 KIAA1109Q2LD37 5005 aa3.6□□□□□ -1.83
PPFIBP1-202ENST00000318304 R4GN34 69 aa3.58□□□□□ -1.84
PPFIBP1-202ENST00000318304 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
PPFIBP1-202ENST00000318304 RYR1P21817 5038 aa3.57□□□□□ -1.84
PPFIBP1-202ENST00000318304 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
PPFIBP1-202ENST00000318304 RYR2Q92736 4967 aa3.52□□□□□ -1.85
PPFIBP1-202ENST00000318304 Q5VSD8 79 aa3.51□□□□□ -1.85
PPFIBP1-202ENST00000318304 KRTAP17-1Q9BYP8 105 aa3.5□□□□□ -1.85
PPFIBP1-202ENST00000318304 MT1HL1P0DM35 61 aa3.49□□□□□ -1.85
PPFIBP1-202ENST00000318304 RYR3Q15413 4870 aa3.49□□□□□ -1.85
PPFIBP1-202ENST00000318304 ABCA13Q86UQ4 5058 aa3.47□□□□□ -1.85
PPFIBP1-202ENST00000318304 CAMK2N1Q7Z7J9 78 aa3.43□□□□□ -1.86
PPFIBP1-202ENST00000318304 PP632Q6XCG6 107 aa3.42□□□□□ -1.86
PPFIBP1-202ENST00000318304 MUC2Q02817 5179 aa3.4□□□□□ -1.86
PPFIBP1-202ENST00000318304 J3QL48 77 aa3.4□□□□□ -1.86
PPFIBP1-202ENST00000318304 EPPK1P58107 5090 aaKnown RBP3.35□□□□□ -1.87
PPFIBP1-202ENST00000318304 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
PPFIBP1-202ENST00000318304 KRTAP21-3Q3LHN1 58 aa3.34□□□□□ -1.88
PPFIBP1-202ENST00000318304 MUC17Q685J3 4493 aa3.33□□□□□ -1.88
PPFIBP1-202ENST00000318304 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
PPFIBP1-202ENST00000318304 TNP1P09430 55 aa3.29□□□□□ -1.88
PPFIBP1-202ENST00000318304 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
PPFIBP1-202ENST00000318304 SEC61BP60468 96 aaKnown RBP3.29□□□□□ -1.88
PPFIBP1-202ENST00000318304 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
PPFIBP1-202ENST00000318304 KRTAP4-5Q9BYR2 181 aa3.24□□□□□ -1.89
PPFIBP1-202ENST00000318304 KRTAP23-1A1A580 65 aa3.21□□□□□ -1.9
PPFIBP1-202ENST00000318304 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
PPFIBP1-202ENST00000318304 FLGP20930 4061 aaPredicted RBP3.2□□□□□ -1.9
PPFIBP1-202ENST00000318304 HERC2O95714 4834 aa3.19□□□□□ -1.9
PPFIBP1-202ENST00000318304 PRO2289Q9P1D8 64 aa3.15□□□□□ -1.91
PPFIBP1-202ENST00000318304 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
PPFIBP1-202ENST00000318304 KRTAP19-1Q8IUB9 90 aa3.1□□□□□ -1.91
PPFIBP1-202ENST00000318304 RNF213Q63HN8 5207 aa3.09□□□□□ -1.91
PPFIBP1-202ENST00000318304 HERC1Q15751 4861 aa3.08□□□□□ -1.92
PPFIBP1-202ENST00000318304 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
PPFIBP1-202ENST00000318304 M0R2T5 61 aa3.07□□□□□ -1.92
PPFIBP1-202ENST00000318304 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
PPFIBP1-202ENST00000318304 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
PPFIBP1-202ENST00000318304 KRTAP8-1Q8IUC2 63 aa3.04□□□□□ -1.92
PPFIBP1-202ENST00000318304 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
PPFIBP1-202ENST00000318304 INE1O15225 51 aa3.03□□□□□ -1.92
PPFIBP1-202ENST00000318304 LCE2CQ5TA81 110 aa3□□□□□ -1.93
PPFIBP1-202ENST00000318304 KRTAP12-3P60328 96 aa2.96□□□□□ -1.94
PPFIBP1-202ENST00000318304 KRTAP10-12P60413 245 aa2.95□□□□□ -1.94
PPFIBP1-202ENST00000318304 MT1FP04733 61 aa2.94□□□□□ -1.94
PPFIBP1-202ENST00000318304 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
PPFIBP1-202ENST00000318304 MT2AP02795 61 aa2.91□□□□□ -1.94
PPFIBP1-202ENST00000318304 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
PPFIBP1-202ENST00000318304 MT1XP80297 61 aa2.91□□□□□ -1.94
PPFIBP1-202ENST00000318304 MT1BP07438 61 aa2.88□□□□□ -1.95
PPFIBP1-202ENST00000318304 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
PPFIBP1-202ENST00000318304 MT1HP80294 61 aa2.87□□□□□ -1.95
PPFIBP1-202ENST00000318304 KRTAP9-8Q9BYQ0 159 aa2.87□□□□□ -1.95
PPFIBP1-202ENST00000318304 KRTAP10-7P60409 375 aaPredicted RBP2.87□□□□□ -1.95
PPFIBP1-202ENST00000318304 KMT2DO14686 5537 aa2.87□□□□□ -1.95
PPFIBP1-202ENST00000318304 USH2AO75445 5202 aa2.85□□□□□ -1.95
PPFIBP1-202ENST00000318304 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
PPFIBP1-202ENST00000318304 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
PPFIBP1-202ENST00000318304 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
PPFIBP1-202ENST00000318304 KRTAP9-3Q9BYQ3 159 aa2.72□□□□□ -1.97
PPFIBP1-202ENST00000318304 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
PPFIBP1-202ENST00000318304 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
PPFIBP1-202ENST00000318304 KRTAP4-7Q9BYR0 210 aa2.69□□□□□ -1.98
PPFIBP1-202ENST00000318304 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
PPFIBP1-202ENST00000318304 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
PPFIBP1-202ENST00000318304 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
PPFIBP1-202ENST00000318304 LCE2BO14633 110 aa2.63□□□□□ -1.99
PPFIBP1-202ENST00000318304 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
PPFIBP1-202ENST00000318304 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
PPFIBP1-202ENST00000318304 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
PPFIBP1-202ENST00000318304 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
PPFIBP1-202ENST00000318304 OBSCNQ5VST9 7968 aa2.57□□□□□ -2
PPFIBP1-202ENST00000318304 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
PPFIBP1-202ENST00000318304 MT1LQ93083 61 aa2.52□□□□□ -2.01
PPFIBP1-202ENST00000318304 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms