RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 DMBT1Q9UGM3 2413 aaPredicted RBP10.44□□□□□ -0.74
ZNF554-201ENST00000317243 KRTAP17-1Q9BYP8 105 aa10.42□□□□□ -0.74
ZNF554-201ENST00000317243 H1FX-AS1Q4G0G2 97 aa10.42□□□□□ -0.74
ZNF554-201ENST00000317243 RYR1P21817 5038 aa10.41□□□□□ -0.74
ZNF554-201ENST00000317243 RPS29P62273 56 aaKnown RBP10.36□□□□□ -0.75
ZNF554-201ENST00000317243 KRTAP3-1Q9BYR8 98 aa10.35□□□□□ -0.75
ZNF554-201ENST00000317243 EPPK1P58107 5090 aaKnown RBP10.34□□□□□ -0.75
ZNF554-201ENST00000317243 P0C880 135 aa10.34□□□□□ -0.75
ZNF554-201ENST00000317243 K7ERS5 55 aa10.27□□□□□ -0.77
ZNF554-201ENST00000317243 Q5VSD8 79 aa10.27□□□□□ -0.77
ZNF554-201ENST00000317243 C20orf166-AS1Q96NR2 134 aa10.27□□□□□ -0.77
ZNF554-201ENST00000317243 COX6B2Q6YFQ2 88 aa10.24□□□□□ -0.77
ZNF554-201ENST00000317243 LPAP08519 4548 aa10.19□□□□□ -0.78
ZNF554-201ENST00000317243 KRTAP10-8P60410 259 aa10.15□□□□□ -0.78
ZNF554-201ENST00000317243 ABCA13Q86UQ4 5058 aa10.11□□□□□ -0.79
ZNF554-201ENST00000317243 SPINT4Q6UDR6 99 aa10.1□□□□□ -0.79
ZNF554-201ENST00000317243 LRP2P98164 4655 aa10.07□□□□□ -0.8
ZNF554-201ENST00000317243 TPRXLQ17RH7 258 aa10.06□□□□□ -0.8
ZNF554-201ENST00000317243 A0A0D9SG42 100 aa10.06□□□□□ -0.8
ZNF554-201ENST00000317243 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
ZNF554-201ENST00000317243 C10orf95Q9H7T3 257 aa10.01□□□□□ -0.81
ZNF554-201ENST00000317243 KRTAP13-4Q3LI77 160 aa10□□□□□ -0.81
ZNF554-201ENST00000317243 MT1HL1P0DM35 61 aa9.98□□□□□ -0.81
ZNF554-201ENST00000317243 XP32Q5T750 250 aa9.96□□□□□ -0.81
ZNF554-201ENST00000317243 KRTAP10-6P60371 365 aaPredicted RBP9.95□□□□□ -0.82
ZNF554-201ENST00000317243 NDUFAF8A1L188 74 aa9.92□□□□□ -0.82
ZNF554-201ENST00000317243 KRTAP4-5Q9BYR2 181 aa9.9□□□□□ -0.82
ZNF554-201ENST00000317243 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
ZNF554-201ENST00000317243 KRTAP15-1Q3LI76 137 aa9.84□□□□□ -0.83
ZNF554-201ENST00000317243 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
ZNF554-201ENST00000317243 S4R3F8 94 aa9.76□□□□□ -0.85
ZNF554-201ENST00000317243 KRTAP12-2P59991 146 aa9.72□□□□□ -0.85
ZNF554-201ENST00000317243 HERC2O95714 4834 aa9.67□□□□□ -0.86
ZNF554-201ENST00000317243 KRTAP12-1P59990 96 aa9.56□□□□□ -0.88
ZNF554-201ENST00000317243 MUC2Q02817 5179 aa9.55□□□□□ -0.88
ZNF554-201ENST00000317243 MUC17Q685J3 4493 aa9.48□□□□□ -0.89
ZNF554-201ENST00000317243 HERC1Q15751 4861 aa9.4□□□□□ -0.9
ZNF554-201ENST00000317243 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
ZNF554-201ENST00000317243 PCLOQ9Y6V0 5065 aa9.34□□□□□ -0.91
ZNF554-201ENST00000317243 BIRC6Q9NR09 4857 aa9.33□□□□□ -0.92
ZNF554-201ENST00000317243 J3QL48 77 aa9.32□□□□□ -0.92
ZNF554-201ENST00000317243 M0QZ58 72 aa9.27□□□□□ -0.93
ZNF554-201ENST00000317243 A0A0A0MQY5 61 aa9.2□□□□□ -0.94
ZNF554-201ENST00000317243 PLAC4Q8WY50 150 aa9.17□□□□□ -0.94
ZNF554-201ENST00000317243 SEC61BP60468 96 aaKnown RBP9.14□□□□□ -0.95
ZNF554-201ENST00000317243 R4GN34 69 aa9.13□□□□□ -0.95
ZNF554-201ENST00000317243 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
ZNF554-201ENST00000317243 LUZP6Q538Z0 58 aa9.09□□□□□ -0.95
ZNF554-201ENST00000317243 FAT4Q6V0I7 4981 aa9.09□□□□□ -0.95
ZNF554-201ENST00000317243 HMCN2Q8NDA2 5059 aa9.08□□□□□ -0.96
ZNF554-201ENST00000317243 KRTAP19-2Q3LHN2 52 aa9.04□□□□□ -0.96
ZNF554-201ENST00000317243 RNF213Q63HN8 5207 aa8.99□□□□□ -0.97
ZNF554-201ENST00000317243 FLGP20930 4061 aaPredicted RBP8.93□□□□□ -0.98
ZNF554-201ENST00000317243 UBR4Q5T4S7 5183 aa8.88□□□□□ -0.99
ZNF554-201ENST00000317243 CAMK2N1Q7Z7J9 78 aa8.73□□□□□ -1.01
ZNF554-201ENST00000317243 PP632Q6XCG6 107 aa8.68□□□□□ -1.02
ZNF554-201ENST00000317243 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
ZNF554-201ENST00000317243 M0R2T5 61 aa8.4□□□□□ -1.06
ZNF554-201ENST00000317243 MT1HP80294 61 aa8.37□□□□□ -1.07
ZNF554-201ENST00000317243 TNP1P09430 55 aa8.35□□□□□ -1.07
ZNF554-201ENST00000317243 SPRR5A0A1B0GTR4 108 aa8.34□□□□□ -1.07
ZNF554-201ENST00000317243 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
ZNF554-201ENST00000317243 MT1FP04733 61 aa8.23□□□□□ -1.09
ZNF554-201ENST00000317243 MT2AP02795 61 aa8.19□□□□□ -1.1
ZNF554-201ENST00000317243 KRTAP23-1A1A580 65 aa8.17□□□□□ -1.1
ZNF554-201ENST00000317243 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
ZNF554-201ENST00000317243 SPRR2GQ9BYE4 73 aa8.16□□□□□ -1.1
ZNF554-201ENST00000317243 KRTAP9-8Q9BYQ0 159 aa8.15□□□□□ -1.1
ZNF554-201ENST00000317243 PRO2289Q9P1D8 64 aa7.98□□□□□ -1.13
ZNF554-201ENST00000317243 USH2AO75445 5202 aa7.96□□□□□ -1.13
ZNF554-201ENST00000317243 LCE3AQ5TA76 89 aa7.92□□□□□ -1.14
ZNF554-201ENST00000317243 MT1BP07438 61 aa7.87□□□□□ -1.15
ZNF554-201ENST00000317243 KRTAP19-8Q3LI54 63 aa7.81□□□□□ -1.16
ZNF554-201ENST00000317243 KRTAP9-3Q9BYQ3 159 aa7.79□□□□□ -1.16
ZNF554-201ENST00000317243 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
ZNF554-201ENST00000317243 MT1XP80297 61 aa7.76□□□□□ -1.17
ZNF554-201ENST00000317243 INE1O15225 51 aa7.76□□□□□ -1.17
ZNF554-201ENST00000317243 KMT2DO14686 5537 aa7.71□□□□□ -1.18
ZNF554-201ENST00000317243 LCE2DQ5TA82 110 aaPredicted RBP7.69□□□□□ -1.18
ZNF554-201ENST00000317243 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
ZNF554-201ENST00000317243 LCE2BO14633 110 aa7.61□□□□□ -1.19
ZNF554-201ENST00000317243 KRTAP8-1Q8IUC2 63 aa7.6□□□□□ -1.19
ZNF554-201ENST00000317243 LCE2AQ5TA79 106 aaPredicted RBP7.5□□□□□ -1.21
ZNF554-201ENST00000317243 KRTAP12-3P60328 96 aa7.5□□□□□ -1.21
ZNF554-201ENST00000317243 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
ZNF554-201ENST00000317243 FSIP2Q5CZC0 6907 aa7.46□□□□□ -1.21
ZNF554-201ENST00000317243 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
ZNF554-201ENST00000317243 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
ZNF554-201ENST00000317243 SSPOA2VEC9 5147 aa7.26□□□□□ -1.25
ZNF554-201ENST00000317243 KRTAP19-5Q3LI72 72 aa7.21□□□□□ -1.26
ZNF554-201ENST00000317243 LCE3CQ5T5A8 94 aa7.05□□□□□ -1.28
ZNF554-201ENST00000317243 KRTAP4-7Q9BYR0 210 aa6.94□□□□□ -1.3
ZNF554-201ENST00000317243 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
ZNF554-201ENST00000317243 KRTAP9-6A8MVA2 160 aa6.92□□□□□ -1.3
ZNF554-201ENST00000317243 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
ZNF554-201ENST00000317243 MUC12Q9UKN1 5478 aa6.84□□□□□ -1.31
ZNF554-201ENST00000317243 KRTAP2-3P0C7H8 128 aa6.76□□□□□ -1.33
ZNF554-201ENST00000317243 KRTAP2-4Q9BYR9 128 aa6.76□□□□□ -1.33
ZNF554-201ENST00000317243 KRTAP2-1Q9BYU5 128 aa6.76□□□□□ -1.33
ZNF554-201ENST00000317243 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms