RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 A0A0D9SG42 100 aa8.54□□□□□ -1.04
CACFD1-202ENST00000316948 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
CACFD1-202ENST00000316948 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
CACFD1-202ENST00000316948 P0C880 135 aa8.49□□□□□ -1.05
CACFD1-202ENST00000316948 RPL37P61927 97 aaKnown RBP8.48□□□□□ -1.05
CACFD1-202ENST00000316948 A0A1B0GVY2 172 aa8.48□□□□□ -1.05
CACFD1-202ENST00000316948 KRTAP13-4Q3LI77 160 aa8.47□□□□□ -1.05
CACFD1-202ENST00000316948 KRTAP10-6P60371 365 aaPredicted RBP8.45□□□□□ -1.06
CACFD1-202ENST00000316948 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
CACFD1-202ENST00000316948 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
CACFD1-202ENST00000316948 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
CACFD1-202ENST00000316948 HSPG2P98160 4391 aa8.4□□□□□ -1.06
CACFD1-202ENST00000316948 KRTAP3-3Q9BYR6 98 aa8.4□□□□□ -1.06
CACFD1-202ENST00000316948 C10orf95Q9H7T3 257 aa8.39□□□□□ -1.07
CACFD1-202ENST00000316948 TNXBP22105 4242 aa8.37□□□□□ -1.07
CACFD1-202ENST00000316948 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
CACFD1-202ENST00000316948 S4R3F8 94 aa8.29□□□□□ -1.08
CACFD1-202ENST00000316948 KRTAP10-8P60410 259 aa8.29□□□□□ -1.08
CACFD1-202ENST00000316948 KIAA1109Q2LD37 5005 aa8.28□□□□□ -1.08
CACFD1-202ENST00000316948 EPPK1P58107 5090 aaKnown RBP8.26□□□□□ -1.09
CACFD1-202ENST00000316948 KRTAP17-1Q9BYP8 105 aa8.23□□□□□ -1.09
CACFD1-202ENST00000316948 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
CACFD1-202ENST00000316948 LPAP08519 4548 aa8.2□□□□□ -1.1
CACFD1-202ENST00000316948 XP32Q5T750 250 aa8.19□□□□□ -1.1
CACFD1-202ENST00000316948 NDUFAF8A1L188 74 aa8.17□□□□□ -1.1
CACFD1-202ENST00000316948 Q5VSD8 79 aa8.16□□□□□ -1.1
CACFD1-202ENST00000316948 RYR1P21817 5038 aa8.15□□□□□ -1.1
CACFD1-202ENST00000316948 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
CACFD1-202ENST00000316948 KRTAP12-1P59990 96 aa8.1□□□□□ -1.11
CACFD1-202ENST00000316948 LRP2P98164 4655 aa8.07□□□□□ -1.12
CACFD1-202ENST00000316948 ABCA13Q86UQ4 5058 aa8.05□□□□□ -1.12
CACFD1-202ENST00000316948 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
CACFD1-202ENST00000316948 M0QZ58 72 aa7.92□□□□□ -1.14
CACFD1-202ENST00000316948 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.15
CACFD1-202ENST00000316948 R4GN34 69 aa7.76□□□□□ -1.17
CACFD1-202ENST00000316948 MUC2Q02817 5179 aa7.71□□□□□ -1.18
CACFD1-202ENST00000316948 HERC2O95714 4834 aa7.69□□□□□ -1.18
CACFD1-202ENST00000316948 PLAC4Q8WY50 150 aa7.66□□□□□ -1.18
CACFD1-202ENST00000316948 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
CACFD1-202ENST00000316948 MUC17Q685J3 4493 aa7.59□□□□□ -1.2
CACFD1-202ENST00000316948 PCLOQ9Y6V0 5065 aa7.54□□□□□ -1.2
CACFD1-202ENST00000316948 BIRC6Q9NR09 4857 aa7.53□□□□□ -1.2
CACFD1-202ENST00000316948 HERC1Q15751 4861 aa7.51□□□□□ -1.21
CACFD1-202ENST00000316948 KRTAP4-1Q9BYQ7 146 aa7.49□□□□□ -1.21
CACFD1-202ENST00000316948 SEC61BP60468 96 aaKnown RBP7.48□□□□□ -1.21
CACFD1-202ENST00000316948 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
CACFD1-202ENST00000316948 LUZP6Q538Z0 58 aa7.41□□□□□ -1.22
CACFD1-202ENST00000316948 PP632Q6XCG6 107 aa7.35□□□□□ -1.23
CACFD1-202ENST00000316948 J3QL48 77 aa7.32□□□□□ -1.24
CACFD1-202ENST00000316948 KRTAP19-2Q3LHN2 52 aa7.31□□□□□ -1.24
CACFD1-202ENST00000316948 A0A0A0MQY5 61 aa7.29□□□□□ -1.24
CACFD1-202ENST00000316948 FAT4Q6V0I7 4981 aa7.29□□□□□ -1.24
CACFD1-202ENST00000316948 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
CACFD1-202ENST00000316948 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
CACFD1-202ENST00000316948 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
CACFD1-202ENST00000316948 TNP1P09430 55 aa7.13□□□□□ -1.27
CACFD1-202ENST00000316948 UBR4Q5T4S7 5183 aa7.12□□□□□ -1.27
CACFD1-202ENST00000316948 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.3
CACFD1-202ENST00000316948 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
CACFD1-202ENST00000316948 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
CACFD1-202ENST00000316948 KRTAP19-1Q8IUB9 90 aa6.77□□□□□ -1.33
CACFD1-202ENST00000316948 SPRR2GQ9BYE4 73 aa6.75□□□□□ -1.33
CACFD1-202ENST00000316948 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
CACFD1-202ENST00000316948 M0R2T5 61 aa6.74□□□□□ -1.33
CACFD1-202ENST00000316948 MT1HP80294 61 aa6.64□□□□□ -1.35
CACFD1-202ENST00000316948 MT1FP04733 61 aa6.6□□□□□ -1.35
CACFD1-202ENST00000316948 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
CACFD1-202ENST00000316948 MT2AP02795 61 aa6.57□□□□□ -1.36
CACFD1-202ENST00000316948 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
CACFD1-202ENST00000316948 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
CACFD1-202ENST00000316948 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
CACFD1-202ENST00000316948 USH2AO75445 5202 aa6.44□□□□□ -1.38
CACFD1-202ENST00000316948 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
CACFD1-202ENST00000316948 INE1O15225 51 aa6.4□□□□□ -1.39
CACFD1-202ENST00000316948 MT1BP07438 61 aa6.39□□□□□ -1.39
CACFD1-202ENST00000316948 KRTAP10-5P60370 271 aa6.39□□□□□ -1.39
CACFD1-202ENST00000316948 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
CACFD1-202ENST00000316948 MT1XP80297 61 aa6.38□□□□□ -1.39
CACFD1-202ENST00000316948 KRTAP10-12P60413 245 aa6.34□□□□□ -1.4
CACFD1-202ENST00000316948 KMT2DO14686 5537 aa6.28□□□□□ -1.4
CACFD1-202ENST00000316948 KRTAP10-7P60409 375 aaPredicted RBP6.25□□□□□ -1.41
CACFD1-202ENST00000316948 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
CACFD1-202ENST00000316948 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
CACFD1-202ENST00000316948 KRTAP19-5Q3LI72 72 aa6.03□□□□□ -1.44
CACFD1-202ENST00000316948 LCE2BO14633 110 aa6.01□□□□□ -1.45
CACFD1-202ENST00000316948 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
CACFD1-202ENST00000316948 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.45
CACFD1-202ENST00000316948 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
CACFD1-202ENST00000316948 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
CACFD1-202ENST00000316948 KRTAP9-6A8MVA2 160 aa5.87□□□□□ -1.47
CACFD1-202ENST00000316948 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
CACFD1-202ENST00000316948 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
CACFD1-202ENST00000316948 KRTAP2-3P0C7H8 128 aa5.69□□□□□ -1.5
CACFD1-202ENST00000316948 KRTAP2-4Q9BYR9 128 aa5.69□□□□□ -1.5
CACFD1-202ENST00000316948 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
CACFD1-202ENST00000316948 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
CACFD1-202ENST00000316948 FCGBPQ9Y6R7 5405 aaPredicted RBP5.52□□□□□ -1.53
CACFD1-202ENST00000316948 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
CACFD1-202ENST00000316948 MT1LQ93083 61 aa5.51□□□□□ -1.53
CACFD1-202ENST00000316948 MT1EP04732 61 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms